RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 A0A1W2PNN7 141 aa7.08□□□□□ -1.28
SF3B6-201ENST00000233468 C20orf202A1L168 122 aa7.08□□□□□ -1.28
SF3B6-201ENST00000233468 HERV-K104P63124 156 aa7.08□□□□□ -1.28
SF3B6-201ENST00000233468 ERG28Q9UKR5 140 aa7.08□□□□□ -1.28
SF3B6-201ENST00000233468 MYMXA0A1B0GTQ4 84 aa7.07□□□□□ -1.28
SF3B6-201ENST00000233468 LEPROTO15243 131 aa7.07□□□□□ -1.28
SF3B6-201ENST00000233468 S100A2P29034 98 aa7.07□□□□□ -1.28
SF3B6-201ENST00000233468 KRTAP29-1A8MX34 341 aaPredicted RBP7.06□□□□□ -1.28
SF3B6-201ENST00000233468 PFN2P35080 140 aa7.06□□□□□ -1.28
SF3B6-201ENST00000233468 NMUP48645 174 aa7.06□□□□□ -1.28
SF3B6-201ENST00000233468 LBHQ53QV2 105 aaPredicted RBP7.06□□□□□ -1.28
SF3B6-201ENST00000233468 C9orf129Q5T035 196 aaKnown RBP7.06□□□□□ -1.28
SF3B6-201ENST00000233468 FAM19A5Q7Z5A7 132 aaPredicted RBP7.06□□□□□ -1.28
SF3B6-201ENST00000233468 ZNF625Q96I27 306 aaPredicted RBP7.06□□□□□ -1.28
SF3B6-201ENST00000233468 PMCHL2Q9BQD1 86 aa7.06□□□□□ -1.28
SF3B6-201ENST00000233468 KRTAP4-7Q9BYR0 210 aa7.06□□□□□ -1.28
SF3B6-201ENST00000233468 XAGE1AQ9HD64 81 aa7.06□□□□□ -1.28
SF3B6-201ENST00000233468 NDUFA12Q9UI09 145 aa7.06□□□□□ -1.28
SF3B6-201ENST00000233468 M0QXV9 152 aa7.05□□□□□ -1.28
SF3B6-201ENST00000233468 LGALS3P17931 250 aaKnown RBP7.05□□□□□ -1.28
SF3B6-201ENST00000233468 KRTDAPP60985 99 aa7.05□□□□□ -1.28
SF3B6-201ENST00000233468 LINC01545Q5VT33 79 aa7.05□□□□□ -1.28
SF3B6-201ENST00000233468 FAM168BA1KXE4 195 aa7.04□□□□□ -1.28
SF3B6-201ENST00000233468 J3QQQ9 107 aa7.04□□□□□ -1.28
SF3B6-201ENST00000233468 C3orf79P0CE67 100 aa7.04□□□□□ -1.28
SF3B6-201ENST00000233468 LINC00158P58513 81 aa7.04□□□□□ -1.28
SF3B6-201ENST00000233468 KRTAP10-4P60372 401 aaPredicted RBP7.04□□□□□ -1.28
SF3B6-201ENST00000233468 UBE2BP63146 152 aa7.04□□□□□ -1.28
SF3B6-201ENST00000233468 MEIG1Q5JSS6 88 aa7.04□□□□□ -1.28
SF3B6-201ENST00000233468 TP73-AS1Q9UF72 201 aa7.04□□□□□ -1.28
SF3B6-201ENST00000233468 KRTAP9-7A8MTY7 169 aa7.03□□□□□ -1.28
SF3B6-201ENST00000233468 PRR3P79522 188 aaKnown RBP7.03□□□□□ -1.28
SF3B6-201ENST00000233468 RPL24P83731 157 aaKnown RBP7.03□□□□□ -1.28
SF3B6-201ENST00000233468 PHF5AQ7RTV0 110 aaKnown RBP7.03□□□□□ -1.28
SF3B6-201ENST00000233468 NKAPP1Q8N9T2 125 aa7.03□□□□□ -1.28
SF3B6-201ENST00000233468 E9PLD3 99 aa7.02□□□□□ -1.29
SF3B6-201ENST00000233468 C22orf24Q9Y442 160 aa7.02□□□□□ -1.29
SF3B6-201ENST00000233468 UBR4Q5T4S7 5183 aa7.01□□□□□ -1.29
SF3B6-201ENST00000233468 HIST3H2BBQ8N257 126 aa7.01□□□□□ -1.29
SF3B6-201ENST00000233468 SND1-IT1Q9HBX3 110 aa7.01□□□□□ -1.29
SF3B6-201ENST00000233468 HMCN2Q8NDA2 5059 aa7.01□□□□□ -1.29
SF3B6-201ENST00000233468 FAT3Q8TDW7 4589 aa7.01□□□□□ -1.29
SF3B6-201ENST00000233468 SERTAD4-AS1Q5TG53 156 aa7□□□□□ -1.29
SF3B6-201ENST00000233468 MRPL55Q7Z7F7 128 aaKnown RBP7□□□□□ -1.29
SF3B6-201ENST00000233468 IGLV5-37A0A075B6J1 123 aa6.99□□□□□ -1.29
SF3B6-201ENST00000233468 SMIM13P0DJ93 91 aa6.99□□□□□ -1.29
SF3B6-201ENST00000233468 SNRPEP62304 92 aaKnown RBP6.99□□□□□ -1.29
SF3B6-201ENST00000233468 C1orf137Q5JT78 98 aa6.99□□□□□ -1.29
SF3B6-201ENST00000233468 HIST1H2BLQ99880 126 aa6.99□□□□□ -1.29
SF3B6-201ENST00000233468 PSORS1C2Q9UIG4 136 aa6.99□□□□□ -1.29
SF3B6-201ENST00000233468 A0A0U1RRA0 63 aa6.98□□□□□ -1.29
SF3B6-201ENST00000233468 TSPEAR-AS2P59090 65 aa6.98□□□□□ -1.29
SF3B6-201ENST00000233468 SPINK6Q6UWN8 80 aa6.98□□□□□ -1.29
SF3B6-201ENST00000233468 KRTAP7-1Q8IUC3 87 aa6.98□□□□□ -1.29
SF3B6-201ENST00000233468 MIR7-3HGQ8N6C7 128 aa6.97□□□□□ -1.29
SF3B6-201ENST00000233468 MIEN1Q9BRT3 115 aa6.97□□□□□ -1.29
SF3B6-201ENST00000233468 HSBP1L1C9JCN9 74 aa6.96□□□□□ -1.3
SF3B6-201ENST00000233468 OXTP01178 125 aa6.96□□□□□ -1.3
SF3B6-201ENST00000233468 HNRNPA3P51991 378 aaKnown RBP6.96□□□□□ -1.3
SF3B6-201ENST00000233468 PKHD1L1Q86WI1 4243 aa6.95□□□□□ -1.3
SF3B6-201ENST00000233468 C5orf52A6NGY3 159 aa6.95□□□□□ -1.3
SF3B6-201ENST00000233468 VPREB1P12018 145 aa6.95□□□□□ -1.3
SF3B6-201ENST00000233468 REG3GQ6UW15 175 aa6.95□□□□□ -1.3
SF3B6-201ENST00000233468 BOD1L2Q8IYS8 172 aa6.95□□□□□ -1.3
SF3B6-201ENST00000233468 LINC00167Q96N53 147 aa6.95□□□□□ -1.3
SF3B6-201ENST00000233468 IGKV2D-26A0A0A0MRZ7 120 aa6.94□□□□□ -1.3
SF3B6-201ENST00000233468 A0A0J9YXY3 114 aa6.94□□□□□ -1.3
SF3B6-201ENST00000233468 ZNF815PA8K554 130 aa6.94□□□□□ -1.3
SF3B6-201ENST00000233468 IGLV7-43P04211 117 aa6.94□□□□□ -1.3
SF3B6-201ENST00000233468 S100A12P80511 92 aa6.94□□□□□ -1.3
SF3B6-201ENST00000233468 DIRC1Q969H9 104 aa6.94□□□□□ -1.3
SF3B6-201ENST00000233468 LOC107984156A0A0G2JMH3 177 aa6.93□□□□□ -1.3
SF3B6-201ENST00000233468 GAGE10A6NGK3 116 aa6.93□□□□□ -1.3
SF3B6-201ENST00000233468 RPL37AP8A6NKH3 93 aa6.93□□□□□ -1.3
SF3B6-201ENST00000233468 M0R378 163 aa6.93□□□□□ -1.3
SF3B6-201ENST00000233468 TIMM17BO60830 172 aa6.93□□□□□ -1.3
SF3B6-201ENST00000233468 SRSF9Q13242 221 aaKnown RBP eCLIP6.93□□□□□ -1.3
SF3B6-201ENST00000233468 ARL17AQ8IVW1 177 aa6.93□□□□□ -1.3
SF3B6-201ENST00000233468 CDIP1Q9H305 208 aa6.93□□□□□ -1.3
SF3B6-201ENST00000233468 BCE1O60756 84 aa6.92□□□□□ -1.3
SF3B6-201ENST00000233468 SCGB1D1O95968 90 aa6.92□□□□□ -1.3
SF3B6-201ENST00000233468 SCGB1D4Q6XE38 83 aa6.92□□□□□ -1.3
SF3B6-201ENST00000233468 ATOH7Q8N100 152 aa6.92□□□□□ -1.3
SF3B6-201ENST00000233468 COPS9Q8WXC6 57 aa6.92□□□□□ -1.3
SF3B6-201ENST00000233468 IGLV1-50A0A075B6I6 118 aa6.91□□□□□ -1.3
SF3B6-201ENST00000233468 RPL28P46779 137 aaKnown RBP6.91□□□□□ -1.3
SF3B6-201ENST00000233468 KRTAP4-9Q9BYQ8 210 aa6.91□□□□□ -1.3
SF3B6-201ENST00000233468 IGKV2-28A0A075B6P5 120 aa6.9□□□□□ -1.3
SF3B6-201ENST00000233468 TRBV10-2A0A0K0K1G8 114 aa6.9□□□□□ -1.3
SF3B6-201ENST00000233468 TMEM238C9JI98 176 aa6.9□□□□□ -1.3
SF3B6-201ENST00000233468 ZNF861PO60384 105 aa6.9□□□□□ -1.3
SF3B6-201ENST00000233468 NDUFC2O95298 119 aa6.9□□□□□ -1.3
SF3B6-201ENST00000233468 IGKV2D-28P01615 120 aa6.9□□□□□ -1.3
SF3B6-201ENST00000233468 KRTAP11-1Q8IUC1 163 aa6.9□□□□□ -1.3
SF3B6-201ENST00000233468 DAND5Q8N907 189 aa6.9□□□□□ -1.3
SF3B6-201ENST00000233468 CBY1Q9Y3M2 126 aa6.9□□□□□ -1.3
SF3B6-201ENST00000233468 UBE2AP49459 152 aa6.89□□□□□ -1.31
SF3B6-201ENST00000233468 Q6ZVH6 145 aa6.89□□□□□ -1.31
SF3B6-201ENST00000233468 SPANXB1Q9NS25 103 aaPredicted RBP6.89□□□□□ -1.31
SF3B6-201ENST00000233468 H0Y9J4 135 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 165.5 ms