RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 CASC10Q5T4H9 136 aa11.96□□□□□ -0.49
VIM-201ENST00000224237 MTURNQ8N3F0 131 aa11.96□□□□□ -0.49
VIM-201ENST00000224237 IGKV2-28A0A075B6P5 120 aa11.95□□□□□ -0.5
VIM-201ENST00000224237 IGKV2D-28P01615 120 aa11.95□□□□□ -0.5
VIM-201ENST00000224237 TRIAP1O43715 76 aa11.94□□□□□ -0.5
VIM-201ENST00000224237 NDUFC2O95298 119 aa11.94□□□□□ -0.5
VIM-201ENST00000224237 SYCNQ0VAF6 134 aa11.94□□□□□ -0.5
VIM-201ENST00000224237 ATXN8Q156A1 80 aa11.94□□□□□ -0.5
VIM-201ENST00000224237 NBDYA0A0U1RRE5 68 aa11.93□□□□□ -0.5
VIM-201ENST00000224237 M0QXV9 152 aa11.93□□□□□ -0.5
VIM-201ENST00000224237 LINC00337Q8N6G1 96 aa11.93□□□□□ -0.5
VIM-201ENST00000224237 VPS13DQ5THJ4 4388 aa11.92□□□□□ -0.5
VIM-201ENST00000224237 NDUFC2-KCTD14E9PQ53 114 aa11.91□□□□□ -0.5
VIM-201ENST00000224237 PSCAO43653 123 aa11.91□□□□□ -0.5
VIM-201ENST00000224237 CARD19Q96LW7 228 aa11.91□□□□□ -0.5
VIM-201ENST00000224237 DNAH10Q8IVF4 4471 aa11.89□□□□□ -0.51
VIM-201ENST00000224237 SLC25A20O43772 301 aa11.89□□□□□ -0.51
VIM-201ENST00000224237 TEN1Q86WV5 123 aa11.89□□□□□ -0.51
VIM-201ENST00000224237 LINC01600Q96MT4 127 aa11.89□□□□□ -0.51
VIM-201ENST00000224237 WWC2-AS2Q96NR7 200 aa11.89□□□□□ -0.51
VIM-201ENST00000224237 C9JAW5 83 aa11.88□□□□□ -0.51
VIM-201ENST00000224237 LECT2O14960 151 aa11.88□□□□□ -0.51
VIM-201ENST00000224237 LINC01620Q4KN68 170 aa11.88□□□□□ -0.51
VIM-201ENST00000224237 SLPIP03973 132 aa11.86□□□□□ -0.51
VIM-201ENST00000224237 OR13C6PQ8NH95 151 aa11.86□□□□□ -0.51
VIM-201ENST00000224237 XAGE1AQ9HD64 81 aa11.86□□□□□ -0.51
VIM-201ENST00000224237 PPDPFLQ8WWR9 84 aa11.85□□□□□ -0.51
VIM-201ENST00000224237 TRBV10-2A0A0K0K1G8 114 aa11.85□□□□□ -0.51
VIM-201ENST00000224237 RPL28P46779 137 aaKnown RBP11.85□□□□□ -0.51
VIM-201ENST00000224237 ANKRD29Q8N6D5 301 aa11.85□□□□□ -0.51
VIM-201ENST00000224237 TLX1NBP0CAT3 122 aa11.84□□□□□ -0.51
VIM-201ENST00000224237 PCP4P48539 62 aa11.84□□□□□ -0.51
VIM-201ENST00000224237 PRR3P79522 188 aaKnown RBP11.84□□□□□ -0.51
VIM-201ENST00000224237 Q6ZRP5 223 aa11.84□□□□□ -0.51
VIM-201ENST00000224237 Q8NDZ9 215 aa11.84□□□□□ -0.51
VIM-201ENST00000224237 LST1O00453 97 aa11.83□□□□□ -0.52
VIM-201ENST00000224237 M0R2N4 97 aa11.83□□□□□ -0.52
VIM-201ENST00000224237 GAGE2EQ4V326 116 aa11.83□□□□□ -0.52
VIM-201ENST00000224237 C14orf177Q52M58 125 aa11.83□□□□□ -0.52
VIM-201ENST00000224237 TMEM126AQ9H061 195 aa11.83□□□□□ -0.52
VIM-201ENST00000224237 GAGE2DQ9UEU5 116 aa11.83□□□□□ -0.52
VIM-201ENST00000224237 NCR3O14931 201 aa11.82□□□□□ -0.52
VIM-201ENST00000224237 SMIM11BQ8TCY0 68 aa11.82□□□□□ -0.52
VIM-201ENST00000224237 RPL18AQ02543 176 aaKnown RBP11.8□□□□□ -0.52
VIM-201ENST00000224237 Q6ZRN7 208 aaPredicted RBP11.8□□□□□ -0.52
VIM-201ENST00000224237 CLEC2BQ92478 149 aa11.8□□□□□ -0.52
VIM-201ENST00000224237 H3BT86 120 aa11.79□□□□□ -0.52
VIM-201ENST00000224237 CNBPP62633 177 aaKnown RBP11.79□□□□□ -0.52
VIM-201ENST00000224237 S100A7L2Q5SY68 101 aa11.79□□□□□ -0.52
VIM-201ENST00000224237 KMT2AQ03164 3969 aa11.78□□□□□ -0.52
VIM-201ENST00000224237 VPREB1P12018 145 aa11.77□□□□□ -0.53
VIM-201ENST00000224237 C9orf129Q5T035 196 aaKnown RBP11.76□□□□□ -0.53
VIM-201ENST00000224237 LOC107984640A0A0U1RRK4 108 aa11.76□□□□□ -0.53
VIM-201ENST00000224237 LRCOL1A6NCL2 159 aa11.76□□□□□ -0.53
VIM-201ENST00000224237 LY6G6CO95867 125 aa11.76□□□□□ -0.53
VIM-201ENST00000224237 Q6ZR54 194 aa11.76□□□□□ -0.53
VIM-201ENST00000224237 IGLV6-57P01721 117 aa11.75□□□□□ -0.53
VIM-201ENST00000224237 SIGMAR1Q99720 223 aa11.75□□□□□ -0.53
VIM-201ENST00000224237 C3orf84H3BNL1 204 aa11.74□□□□□ -0.53
VIM-201ENST00000224237 H0YGX0 51 aa11.74□□□□□ -0.53
VIM-201ENST00000224237 TRACP01848 142 aa11.73□□□□□ -0.53
VIM-201ENST00000224237 M0R378 163 aa11.72□□□□□ -0.53
VIM-201ENST00000224237 LINC00476Q8WZB0 136 aa11.72□□□□□ -0.53
VIM-201ENST00000224237 PLA2G2DQ9UNK4 145 aa11.72□□□□□ -0.53
VIM-201ENST00000224237 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.72□□□□□ -0.53
VIM-201ENST00000224237 GAGE2BQ13066 116 aa11.72□□□□□ -0.53
VIM-201ENST00000224237 TRBV10-3A0A0K0K1G6 114 aa11.7□□□□□ -0.54
VIM-201ENST00000224237 C21orf62-AS1Q17RA5 79 aa11.7□□□□□ -0.54
VIM-201ENST00000224237 FAM218AQ96MZ4 157 aa11.7□□□□□ -0.54
VIM-201ENST00000224237 ALMS1Q8TCU4 4167 aa11.69□□□□□ -0.54
VIM-201ENST00000224237 DNAH2Q9P225 4427 aa11.69□□□□□ -0.54
VIM-201ENST00000224237 NKAPP1Q8N9T2 125 aa11.69□□□□□ -0.54
VIM-201ENST00000224237 TEX49A0A1B0GTD5 131 aa11.68□□□□□ -0.54
VIM-201ENST00000224237 C6orf99Q4VX62 202 aa11.68□□□□□ -0.54
VIM-201ENST00000224237 DNAH6Q9C0G6 4158 aa11.68□□□□□ -0.54
VIM-201ENST00000224237 TRAV23DV6A0A075B6W5 121 aa11.68□□□□□ -0.54
VIM-201ENST00000224237 SERTAD4-AS1Q5TG53 156 aa11.68□□□□□ -0.54
VIM-201ENST00000224237 Q8N814 137 aa11.68□□□□□ -0.54
VIM-201ENST00000224237 CDIP1Q9H305 208 aa11.68□□□□□ -0.54
VIM-201ENST00000224237 C16orf90A8MZG2 172 aa11.67□□□□□ -0.54
VIM-201ENST00000224237 IGLV5-37A0A075B6J1 123 aa11.66□□□□□ -0.54
VIM-201ENST00000224237 PKIGQ9Y2B9 76 aa11.66□□□□□ -0.54
VIM-201ENST00000224237 A0A087WYN8 130 aa11.66□□□□□ -0.54
VIM-201ENST00000224237 C1orf134Q5TEV5 83 aa11.66□□□□□ -0.54
VIM-201ENST00000224237 C9orf163Q8N9P6 203 aa11.66□□□□□ -0.54
VIM-201ENST00000224237 A0A087WTM6 91 aa11.65□□□□□ -0.54
VIM-201ENST00000224237 DNAL4O96015 105 aa11.64□□□□□ -0.55
VIM-201ENST00000224237 A0A096LNI7 61 aa11.63□□□□□ -0.55
VIM-201ENST00000224237 A0A1B0GX51 115 aa11.63□□□□□ -0.55
VIM-201ENST00000224237 FAM168BA1KXE4 195 aa11.63□□□□□ -0.55
VIM-201ENST00000224237 SCGB1A1P11684 91 aa11.63□□□□□ -0.55
VIM-201ENST00000224237 DIRC1Q969H9 104 aa11.63□□□□□ -0.55
VIM-201ENST00000224237 ZNF73O43830 326 aaPredicted RBP11.63□□□□□ -0.55
VIM-201ENST00000224237 BAALC-AS2P0C853 105 aa11.63□□□□□ -0.55
VIM-201ENST00000224237 C7orf33Q8WU49 177 aa11.62□□□□□ -0.55
VIM-201ENST00000224237 IGKV2-24A0A0C4DH68 120 aa11.61□□□□□ -0.55
VIM-201ENST00000224237 FAM19A5Q7Z5A7 132 aaPredicted RBP11.6□□□□□ -0.55
VIM-201ENST00000224237 KRTAP7-1Q8IUC3 87 aa11.6□□□□□ -0.55
VIM-201ENST00000224237 SNCGO76070 127 aa11.59□□□□□ -0.55
VIM-201ENST00000224237 C22orf24Q9Y442 160 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms