RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 IFITM1P13164 125 aa8.93□□□□□ -0.98
SEC61B-201ENST00000223641 SOSTDC1Q6X4U4 206 aa8.93□□□□□ -0.98
SEC61B-201ENST00000223641 LINC00308Q8TCZ7 52 aa8.93□□□□□ -0.98
SEC61B-201ENST00000223641 SPACA4Q8TDM5 124 aa8.93□□□□□ -0.98
SEC61B-201ENST00000223641 LINC00474Q9P2X8 69 aa8.93□□□□□ -0.98
SEC61B-201ENST00000223641 PLA2G2DQ9UNK4 145 aa8.93□□□□□ -0.98
SEC61B-201ENST00000223641 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.93□□□□□ -0.98
SEC61B-201ENST00000223641 IGKV2-24A0A0C4DH68 120 aa8.92□□□□□ -0.98
SEC61B-201ENST00000223641 EPM2AB3EWF7 344 aa8.92□□□□□ -0.98
SEC61B-201ENST00000223641 CHTF8P0CG12 524 aa8.92□□□□□ -0.98
SEC61B-201ENST00000223641 SRSF9Q13242 221 aaKnown RBP eCLIP8.91□□□□□ -0.98
SEC61B-201ENST00000223641 TAL2Q16559 108 aa8.91□□□□□ -0.98
SEC61B-201ENST00000223641 FAM30AQ9NZY2 134 aa8.91□□□□□ -0.98
SEC61B-201ENST00000223641 HNRNPA3P51991 378 aaKnown RBP8.9□□□□□ -0.98
SEC61B-201ENST00000223641 KRTAP7-1Q8IUC3 87 aa8.9□□□□□ -0.98
SEC61B-201ENST00000223641 MUSTN1Q8IVN3 82 aa8.9□□□□□ -0.98
SEC61B-201ENST00000223641 A0A1W2PNN7 141 aa8.89□□□□□ -0.99
SEC61B-201ENST00000223641 NDUFC2O95298 119 aa8.89□□□□□ -0.99
SEC61B-201ENST00000223641 NPC2P61916 151 aa8.89□□□□□ -0.99
SEC61B-201ENST00000223641 Q8NDZ9 215 aa8.89□□□□□ -0.99
SEC61B-201ENST00000223641 COPS9Q8WXC6 57 aa8.89□□□□□ -0.99
SEC61B-201ENST00000223641 HIST1H4GQ99525 98 aa8.89□□□□□ -0.99
SEC61B-201ENST00000223641 IGLV5-37A0A075B6J1 123 aa8.88□□□□□ -0.99
SEC61B-201ENST00000223641 FAM168BA1KXE4 195 aa8.88□□□□□ -0.99
SEC61B-201ENST00000223641 VPREB1P12018 145 aa8.88□□□□□ -0.99
SEC61B-201ENST00000223641 A0A087WYN8 130 aa8.87□□□□□ -0.99
SEC61B-201ENST00000223641 HSD52Q0P140 79 aa8.87□□□□□ -0.99
SEC61B-201ENST00000223641 SERTAD4-AS1Q5TG53 156 aa8.87□□□□□ -0.99
SEC61B-201ENST00000223641 CEND1Q8N111 149 aa8.87□□□□□ -0.99
SEC61B-201ENST00000223641 PLAC8Q9NZF1 115 aa8.87□□□□□ -0.99
SEC61B-201ENST00000223641 RPL24P83731 157 aaKnown RBP8.86□□□□□ -0.99
SEC61B-201ENST00000223641 DDTP30046 118 aa8.85□□□□□ -0.99
SEC61B-201ENST00000223641 APOBP04114 4563 aaKnown RBP8.84□□□□□ -0.99
SEC61B-201ENST00000223641 CTAG1AP78358 180 aa8.84□□□□□ -0.99
SEC61B-201ENST00000223641 C22orf24Q9Y442 160 aa8.84□□□□□ -0.99
SEC61B-201ENST00000223641 EPPK1P58107 5090 aaKnown RBP8.83□□□□□ -1
SEC61B-201ENST00000223641 IGKV2-28A0A075B6P5 120 aa8.83□□□□□ -1
SEC61B-201ENST00000223641 TRBV10-2A0A0K0K1G8 114 aa8.83□□□□□ -1
SEC61B-201ENST00000223641 A4D1N5 150 aa8.83□□□□□ -1
SEC61B-201ENST00000223641 IGKV2D-28P01615 120 aa8.83□□□□□ -1
SEC61B-201ENST00000223641 PRR3P79522 188 aaKnown RBP8.83□□□□□ -1
SEC61B-201ENST00000223641 CIRBP-AS1Q8TBR5 109 aa8.83□□□□□ -1
SEC61B-201ENST00000223641 DPH3Q96FX2 82 aa8.83□□□□□ -1
SEC61B-201ENST00000223641 FXYD2P54710 66 aa8.82□□□□□ -1
SEC61B-201ENST00000223641 XGP55808 180 aa8.82□□□□□ -1
SEC61B-201ENST00000223641 SCXQ7RTU7 201 aa8.82□□□□□ -1
SEC61B-201ENST00000223641 FAM19A5Q7Z5A7 132 aaPredicted RBP8.82□□□□□ -1
SEC61B-201ENST00000223641 M0R378 163 aa8.81□□□□□ -1
SEC61B-201ENST00000223641 M0QXV9 152 aa8.8□□□□□ -1
SEC61B-201ENST00000223641 BVES-AS1Q5T3Y7 98 aa8.8□□□□□ -1
SEC61B-201ENST00000223641 MRPL55Q7Z7F7 128 aaKnown RBP8.8□□□□□ -1
SEC61B-201ENST00000223641 NKAPP1Q8N9T2 125 aa8.8□□□□□ -1
SEC61B-201ENST00000223641 TMEM238LA0A1B0GVL6 79 aa8.79□□□□□ -1
SEC61B-201ENST00000223641 A6NJY4 79 aa8.79□□□□□ -1
SEC61B-201ENST00000223641 CFC1BP0CG36 223 aa8.79□□□□□ -1
SEC61B-201ENST00000223641 CFC1P0CG37 223 aa8.79□□□□□ -1
SEC61B-201ENST00000223641 LINC00337Q8N6G1 96 aa8.79□□□□□ -1
SEC61B-201ENST00000223641 C7orf33Q8WU49 177 aa8.79□□□□□ -1
SEC61B-201ENST00000223641 LINC00167Q96N53 147 aa8.79□□□□□ -1
SEC61B-201ENST00000223641 NCR3O14931 201 aa8.78□□□□□ -1
SEC61B-201ENST00000223641 PHF5AQ7RTV0 110 aaKnown RBP8.78□□□□□ -1
SEC61B-201ENST00000223641 A0A0B4J2C4 111 aa8.77□□□□□ -1.01
SEC61B-201ENST00000223641 A0A1B0GWB2 263 aa8.77□□□□□ -1.01
SEC61B-201ENST00000223641 M0R143 59 aa8.77□□□□□ -1.01
SEC61B-201ENST00000223641 IGLV6-57P01721 117 aa8.77□□□□□ -1.01
SEC61B-201ENST00000223641 LBHQ53QV2 105 aaPredicted RBP8.77□□□□□ -1.01
SEC61B-201ENST00000223641 IGLV1-50A0A075B6I6 118 aa8.76□□□□□ -1.01
SEC61B-201ENST00000223641 TRAV13-2A0A0B4J235 113 aa8.76□□□□□ -1.01
SEC61B-201ENST00000223641 CDK2AP2O75956 126 aa8.76□□□□□ -1.01
SEC61B-201ENST00000223641 HINT1P49773 126 aaPredicted RBP8.76□□□□□ -1.01
SEC61B-201ENST00000223641 HAMPP81172 84 aa8.76□□□□□ -1.01
SEC61B-201ENST00000223641 KRTAP11-1Q8IUC1 163 aa8.75□□□□□ -1.01
SEC61B-201ENST00000223641 TMEM126AQ9H061 195 aa8.75□□□□□ -1.01
SEC61B-201ENST00000223641 TRBV10-3A0A0K0K1G6 114 aa8.74□□□□□ -1.01
SEC61B-201ENST00000223641 GAGE10A6NGK3 116 aa8.74□□□□□ -1.01
SEC61B-201ENST00000223641 PCP4L1A6NKN8 68 aa8.73□□□□□ -1.01
SEC61B-201ENST00000223641 S100A7L2Q5SY68 101 aa8.73□□□□□ -1.01
SEC61B-201ENST00000223641 KCNQ1DNQ9H478 68 aa8.73□□□□□ -1.01
SEC61B-201ENST00000223641 NHP2Q9NX24 153 aaKnown RBP8.73□□□□□ -1.01
SEC61B-201ENST00000223641 A6NDN8 102 aa8.72□□□□□ -1.01
SEC61B-201ENST00000223641 RPL37AP8A6NKH3 93 aa8.72□□□□□ -1.01
SEC61B-201ENST00000223641 OR13C6PQ8NH95 151 aa8.71□□□□□ -1.02
SEC61B-201ENST00000223641 RAB37Q96AX2 223 aa8.71□□□□□ -1.02
SEC61B-201ENST00000223641 PRO1854Q9UHT4 67 aa8.71□□□□□ -1.02
SEC61B-201ENST00000223641 HSPG2P98160 4391 aa8.71□□□□□ -1.02
SEC61B-201ENST00000223641 PRYO14603 147 aa8.7□□□□□ -1.02
SEC61B-201ENST00000223641 SPRR1AP35321 89 aa8.7□□□□□ -1.02
SEC61B-201ENST00000223641 UBE2BP63146 152 aa8.7□□□□□ -1.02
SEC61B-201ENST00000223641 SNHG12Q9BXW3 62 aa8.7□□□□□ -1.02
SEC61B-201ENST00000223641 K7ERJ3 54 aa8.69□□□□□ -1.02
SEC61B-201ENST00000223641 RPL13AP40429 203 aaKnown RBP8.69□□□□□ -1.02
SEC61B-201ENST00000223641 CBY1Q9Y3M2 126 aa8.69□□□□□ -1.02
SEC61B-201ENST00000223641 TRAV23DV6A0A075B6W5 121 aa8.68□□□□□ -1.02
SEC61B-201ENST00000223641 KRTAP4-16G5E9R7 235 aaPredicted RBP8.68□□□□□ -1.02
SEC61B-201ENST00000223641 SMIM11BQ8TCY0 68 aa8.68□□□□□ -1.02
SEC61B-201ENST00000223641 PSORS1C2Q9UIG4 136 aa8.68□□□□□ -1.02
SEC61B-201ENST00000223641 BIRC6Q9NR09 4857 aa8.68□□□□□ -1.02
SEC61B-201ENST00000223641 FAT1Q14517 4588 aa8.67□□□□□ -1.02
SEC61B-201ENST00000223641 RPL28P46779 137 aaKnown RBP8.67□□□□□ -1.02
SEC61B-201ENST00000223641 REG3GQ6UW15 175 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms