RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 UNQ6190/PRO20217Q6UXQ8 127 aa11.74□□□□□ -0.53
USB1-201ENST00000219281 CELA1Q9UNI1 258 aa11.74□□□□□ -0.53
USB1-201ENST00000219281 F8P00451 2351 aa11.72□□□□□ -0.53
USB1-201ENST00000219281 HTN3P15516 51 aa11.71□□□□□ -0.53
USB1-201ENST00000219281 SPAG11BQ08648 103 aa11.71□□□□□ -0.53
USB1-201ENST00000219281 LINC00575Q6W349 94 aa11.7□□□□□ -0.54
USB1-201ENST00000219281 CRYGAP11844 174 aa11.7□□□□□ -0.54
USB1-201ENST00000219281 APOC4P55056 127 aa11.7□□□□□ -0.54
USB1-201ENST00000219281 hADV29S1A0JD25 119 aa11.69□□□□□ -0.54
USB1-201ENST00000219281 CYSRT1A8MQ03 144 aa11.69□□□□□ -0.54
USB1-201ENST00000219281 USP17L23D6RBM5 183 aa11.69□□□□□ -0.54
USB1-201ENST00000219281 WFDC9Q8NEX5 89 aa11.69□□□□□ -0.54
USB1-201ENST00000219281 Q8NAQ8 132 aa11.68□□□□□ -0.54
USB1-201ENST00000219281 KLK12Q9UKR0 248 aa11.67□□□□□ -0.54
USB1-201ENST00000219281 LELP1Q5T871 98 aa11.67□□□□□ -0.54
USB1-201ENST00000219281 SERP2Q8N6R1 65 aa11.66□□□□□ -0.54
USB1-201ENST00000219281 CYSTM1Q9H1C7 97 aa11.66□□□□□ -0.54
USB1-201ENST00000219281 A0A0J9YWU9 116 aa11.65□□□□□ -0.55
USB1-201ENST00000219281 SPART-AS1P0CW21 52 aa11.65□□□□□ -0.55
USB1-201ENST00000219281 IGHV4-30-4P0DP06 118 aa11.65□□□□□ -0.55
USB1-201ENST00000219281 MIFP14174 115 aa11.65□□□□□ -0.55
USB1-201ENST00000219281 IGLV6-57P01721 117 aa11.63□□□□□ -0.55
USB1-201ENST00000219281 ENHOQ6UWT2 76 aa11.63□□□□□ -0.55
USB1-201ENST00000219281 RBM3P98179 157 aaKnown RBP11.63□□□□□ -0.55
USB1-201ENST00000219281 MUC7Q8TAX7 377 aa11.63□□□□□ -0.55
USB1-201ENST00000219281 PRR34Q9NV39 138 aa11.63□□□□□ -0.55
USB1-201ENST00000219281 ATP5EP2Q5VTU8 51 aa11.62□□□□□ -0.55
USB1-201ENST00000219281 FAM19A1Q7Z5A9 133 aa11.62□□□□□ -0.55
USB1-201ENST00000219281 UBL5Q9BZL1 73 aa11.62□□□□□ -0.55
USB1-201ENST00000219281 LAMTOR3Q9UHA4 124 aa11.62□□□□□ -0.55
USB1-201ENST00000219281 WIPF1O43516 503 aa11.62□□□□□ -0.55
USB1-201ENST00000219281 ZNF561-AS1K7EIQ3 104 aa11.61□□□□□ -0.55
USB1-201ENST00000219281 LYPD5Q6UWN5 251 aa11.61□□□□□ -0.55
USB1-201ENST00000219281 Q6ZQT0 140 aa11.61□□□□□ -0.55
USB1-201ENST00000219281 UPK3BQ9BT76 320 aa11.61□□□□□ -0.55
USB1-201ENST00000219281 FBN1P35555 2871 aaKnown RBP11.6□□□□□ -0.55
USB1-201ENST00000219281 XAGE1AQ9HD64 81 aa11.6□□□□□ -0.55
USB1-201ENST00000219281 C6orf48Q9UBA6 75 aa11.6□□□□□ -0.55
USB1-201ENST00000219281 TRAV23DV6A0A075B6W5 121 aa11.59□□□□□ -0.55
USB1-201ENST00000219281 TRBV10-3A0A0K0K1G6 114 aa11.59□□□□□ -0.55
USB1-201ENST00000219281 LOC107984640A0A0U1RRK4 108 aa11.59□□□□□ -0.55
USB1-201ENST00000219281 Q6ZQY7 126 aa11.59□□□□□ -0.55
USB1-201ENST00000219281 M0R2N4 97 aa11.58□□□□□ -0.55
USB1-201ENST00000219281 GVQW2A0A096LPI5 108 aaPredicted RBP11.58□□□□□ -0.56
USB1-201ENST00000219281 CMYA5Q8N3K9 4069 aa11.58□□□□□ -0.56
USB1-201ENST00000219281 LOC110117498A0A087WWA1 95 aa11.57□□□□□ -0.56
USB1-201ENST00000219281 GHRHP01286 108 aa11.57□□□□□ -0.56
USB1-201ENST00000219281 ANK2Q01484 3957 aa11.56□□□□□ -0.56
USB1-201ENST00000219281 KRTAP24-1Q3LI83 254 aa11.56□□□□□ -0.56
USB1-201ENST00000219281 OXLD1Q5BKU9 147 aa11.56□□□□□ -0.56
USB1-201ENST00000219281 DIRC1Q969H9 104 aa11.55□□□□□ -0.56
USB1-201ENST00000219281 DSCR8Q96T75 97 aa11.55□□□□□ -0.56
USB1-201ENST00000219281 J3KT08 172 aa11.54□□□□□ -0.56
USB1-201ENST00000219281 HIGD2BQ4VC39 106 aa11.53□□□□□ -0.56
USB1-201ENST00000219281 STAB1Q9NY15 2570 aa11.52□□□□□ -0.57
USB1-201ENST00000219281 PKD1L1Q8TDX9 2849 aa11.52□□□□□ -0.57
USB1-201ENST00000219281 ZNF73O43830 326 aaPredicted RBP11.52□□□□□ -0.57
USB1-201ENST00000219281 KRTAP10-11P60412 298 aa11.52□□□□□ -0.57
USB1-201ENST00000219281 TMEM258P61165 79 aa11.51□□□□□ -0.57
USB1-201ENST00000219281 WFDC10BQ8IUB3 73 aa11.51□□□□□ -0.57
USB1-201ENST00000219281 COX7BP24311 80 aa11.51□□□□□ -0.57
USB1-201ENST00000219281 CAMK2N2Q96S95 79 aa11.51□□□□□ -0.57
USB1-201ENST00000219281 LINC01547P58512 204 aaPredicted RBP11.5□□□□□ -0.57
USB1-201ENST00000219281 HAMPP81172 84 aa11.5□□□□□ -0.57
USB1-201ENST00000219281 Q6ZVQ6 151 aa11.5□□□□□ -0.57
USB1-201ENST00000219281 H3BQ85 93 aa11.49□□□□□ -0.57
USB1-201ENST00000219281 VPREB1P12018 145 aa11.48□□□□□ -0.57
USB1-201ENST00000219281 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.48□□□□□ -0.57
USB1-201ENST00000219281 PDE6GP18545 87 aa11.47□□□□□ -0.57
USB1-201ENST00000219281 ELOF1P60002 83 aaKnown RBP11.47□□□□□ -0.57
USB1-201ENST00000219281 RPS28P62857 69 aaKnown RBP11.47□□□□□ -0.57
USB1-201ENST00000219281 DPH3Q96FX2 82 aa11.47□□□□□ -0.57
USB1-201ENST00000219281 KPRPQ5T749 579 aaPredicted RBP11.46□□□□□ -0.57
USB1-201ENST00000219281 Q6ZRU5 148 aa11.46□□□□□ -0.57
USB1-201ENST00000219281 RETNQ9HD89 108 aa11.46□□□□□ -0.58
USB1-201ENST00000219281 KRTAP26-1Q6PEX3 210 aa11.45□□□□□ -0.58
USB1-201ENST00000219281 FAM19A5Q7Z5A7 132 aaPredicted RBP11.45□□□□□ -0.58
USB1-201ENST00000219281 EGFEM1PQ0D2K5 195 aa11.44□□□□□ -0.58
USB1-201ENST00000219281 TRBV7-4A0A0J9YYF1 115 aa11.43□□□□□ -0.58
USB1-201ENST00000219281 M0R378 163 aa11.43□□□□□ -0.58
USB1-201ENST00000219281 TRBV7-6A0A0J9YX20 115 aa11.43□□□□□ -0.58
USB1-201ENST00000219281 C20orf197Q8N268 126 aa11.43□□□□□ -0.58
USB1-201ENST00000219281 C15orf56Q8N910 161 aa11.43□□□□□ -0.58
USB1-201ENST00000219281 DNAH3Q8TD57 4116 aa11.42□□□□□ -0.58
USB1-201ENST00000219281 TRAV10A0A0B4J240 114 aa11.41□□□□□ -0.58
USB1-201ENST00000219281 Q6ZTC4 211 aa11.41□□□□□ -0.58
USB1-201ENST00000219281 MAST4O15021 2626 aa11.41□□□□□ -0.58
USB1-201ENST00000219281 NDUFC2-KCTD14E9PQ53 114 aa11.4□□□□□ -0.58
USB1-201ENST00000219281 CXCL6P80162 114 aa11.4□□□□□ -0.58
USB1-201ENST00000219281 H3BNG1 76 aa11.39□□□□□ -0.59
USB1-201ENST00000219281 SCXQ7RTU7 201 aa11.39□□□□□ -0.59
USB1-201ENST00000219281 ESRGQ1W209 222 aa11.39□□□□□ -0.59
USB1-201ENST00000219281 TRAV7A0A075B6U4 112 aa11.38□□□□□ -0.59
USB1-201ENST00000219281 LINC00528Q8N1L1 170 aa11.38□□□□□ -0.59
USB1-201ENST00000219281 BCE1O60756 84 aa11.38□□□□□ -0.59
USB1-201ENST00000219281 OXTP01178 125 aa11.38□□□□□ -0.59
USB1-201ENST00000219281 Q6ZRP5 223 aa11.38□□□□□ -0.59
USB1-201ENST00000219281 C1orf43Q9BWL3 253 aa11.37□□□□□ -0.59
USB1-201ENST00000219281 COL6A5A8TX70 2615 aa11.36□□□□□ -0.59
USB1-201ENST00000219281 TENM3Q9P273 2699 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 117.8 ms