RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 LYPD5Q6UWN5 251 aa3.09□□□□□ -1.91
CHD9-201ENST00000219084 C6orf223Q8N319 242 aa3.09□□□□□ -1.91
CHD9-201ENST00000219084 VPREB1P12018 145 aa3.09□□□□□ -1.91
CHD9-201ENST00000219084 SPATA3Q8NHX4 192 aa3.09□□□□□ -1.92
CHD9-201ENST00000219084 SMCPP49901 116 aaPredicted RBP3.09□□□□□ -1.92
CHD9-201ENST00000219084 ACYP2P14621 99 aa3.08□□□□□ -1.92
CHD9-201ENST00000219084 C18orf65Q6ZTR6 163 aa3.08□□□□□ -1.92
CHD9-201ENST00000219084 EPM2AB3EWF7 344 aa3.08□□□□□ -1.92
CHD9-201ENST00000219084 INAFM1C9JVW0 142 aa3.08□□□□□ -1.92
CHD9-201ENST00000219084 TRBV7-4A0A0J9YYF1 115 aa3.08□□□□□ -1.92
CHD9-201ENST00000219084 Q6ZSN1 163 aa3.08□□□□□ -1.92
CHD9-201ENST00000219084 A0A087WVE0 104 aa3.08□□□□□ -1.92
CHD9-201ENST00000219084 MOBPQ13875 183 aa3.08□□□□□ -1.92
CHD9-201ENST00000219084 CYP4F30PQ9H0H9 118 aa3.08□□□□□ -1.92
CHD9-201ENST00000219084 C1orf64Q8NEQ6 169 aa3.08□□□□□ -1.92
CHD9-201ENST00000219084 IGLV9-49A0A0B4J1Y8 123 aa3.07□□□□□ -1.92
CHD9-201ENST00000219084 IGLV6-57P01721 117 aa3.07□□□□□ -1.92
CHD9-201ENST00000219084 C9orf116Q5BN46 136 aaPredicted RBP3.07□□□□□ -1.92
CHD9-201ENST00000219084 Q6ZRX8 168 aa3.07□□□□□ -1.92
CHD9-201ENST00000219084 Q6ZTC4 211 aa3.07□□□□□ -1.92
CHD9-201ENST00000219084 NANOS2P60321 138 aaKnown RBP3.07□□□□□ -1.92
CHD9-201ENST00000219084 Q8NBF4 154 aa3.07□□□□□ -1.92
CHD9-201ENST00000219084 A8MTW9 85 aa3.07□□□□□ -1.92
CHD9-201ENST00000219084 RPL37AP61513 92 aaKnown RBP3.07□□□□□ -1.92
CHD9-201ENST00000219084 PLA2G2AP14555 144 aa3.06□□□□□ -1.92
CHD9-201ENST00000219084 KLKP1Q107X0 134 aa3.06□□□□□ -1.92
CHD9-201ENST00000219084 AVPP01185 164 aa3.06□□□□□ -1.92
CHD9-201ENST00000219084 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.06□□□□□ -1.92
CHD9-201ENST00000219084 IGHV6-1A0A0B4J1U7 121 aa3.06□□□□□ -1.92
CHD9-201ENST00000219084 LITAFQ99732 161 aa3.06□□□□□ -1.92
CHD9-201ENST00000219084 PRR3P79522 188 aaKnown RBP3.06□□□□□ -1.92
CHD9-201ENST00000219084 UNC79Q9P2D8 2635 aa3.05□□□□□ -1.92
CHD9-201ENST00000219084 IGLV5-52A0A0A0MRZ9 124 aa3.05□□□□□ -1.92
CHD9-201ENST00000219084 SETXQ7Z333 2677 aaKnown RBP3.05□□□□□ -1.92
CHD9-201ENST00000219084 A0A087WSZ3 146 aa3.05□□□□□ -1.92
CHD9-201ENST00000219084 TRAV22A0A0B4J277 110 aa3.05□□□□□ -1.92
CHD9-201ENST00000219084 LOC101927531A0A1B0GV80 90 aa3.05□□□□□ -1.92
CHD9-201ENST00000219084 SPINK6Q6UWN8 80 aa3.05□□□□□ -1.92
CHD9-201ENST00000219084 PSPHP1O15172 72 aa3.05□□□□□ -1.92
CHD9-201ENST00000219084 C16orf90A8MZG2 172 aa3.04□□□□□ -1.92
CHD9-201ENST00000219084 Q6ZRU5 148 aa3.04□□□□□ -1.92
CHD9-201ENST00000219084 SMIM29Q86T20 159 aa3.04□□□□□ -1.92
CHD9-201ENST00000219084 SOSTDC1Q6X4U4 206 aa3.04□□□□□ -1.92
CHD9-201ENST00000219084 A0A096LNI7 61 aa3.04□□□□□ -1.92
CHD9-201ENST00000219084 C6orf48Q9UBA6 75 aa3.04□□□□□ -1.92
CHD9-201ENST00000219084 KIAA0087Q14695 138 aa3.04□□□□□ -1.92
CHD9-201ENST00000219084 C22orf24Q9Y442 160 aa3.04□□□□□ -1.92
CHD9-201ENST00000219084 MGAM2Q2M2H8 2515 aa3.04□□□□□ -1.92
CHD9-201ENST00000219084 EDN2P20800 178 aa3.04□□□□□ -1.92
CHD9-201ENST00000219084 LINC00167Q96N53 147 aa3.04□□□□□ -1.92
CHD9-201ENST00000219084 C8orf87E5RJ46 101 aa3.04□□□□□ -1.92
CHD9-201ENST00000219084 PRM2P04554 102 aa3.04□□□□□ -1.92
CHD9-201ENST00000219084 CDSNQ15517 529 aa3.04□□□□□ -1.92
CHD9-201ENST00000219084 FAM218AQ96MZ4 157 aa3.04□□□□□ -1.92
CHD9-201ENST00000219084 PLA2G2DQ9UNK4 145 aa3.04□□□□□ -1.92
CHD9-201ENST00000219084 CIRBP-AS1Q8TBR5 109 aa3.03□□□□□ -1.92
CHD9-201ENST00000219084 A0A1B0GU69 56 aa3.03□□□□□ -1.92
CHD9-201ENST00000219084 A8MWP4 228 aa3.03□□□□□ -1.92
CHD9-201ENST00000219084 DNAH10OSP0CZ25 163 aa3.03□□□□□ -1.92
CHD9-201ENST00000219084 Q6ZRP5 223 aa3.03□□□□□ -1.92
CHD9-201ENST00000219084 TEX15Q9BXT5 2789 aa3.03□□□□□ -1.92
CHD9-201ENST00000219084 PRR4Q16378 134 aa3.03□□□□□ -1.92
CHD9-201ENST00000219084 SPANXA2-OT1Q8N9U9 137 aa3.02□□□□□ -1.93
CHD9-201ENST00000219084 KCNQ1DNQ9H478 68 aa3.02□□□□□ -1.93
CHD9-201ENST00000219084 ITPR3Q14573 2671 aa3.02□□□□□ -1.93
CHD9-201ENST00000219084 SPAG11AQ6PDA7 123 aa3.02□□□□□ -1.93
CHD9-201ENST00000219084 NOTCH1P46531 2555 aa3.02□□□□□ -1.93
CHD9-201ENST00000219084 PHF5AQ7RTV0 110 aaKnown RBP3.02□□□□□ -1.93
CHD9-201ENST00000219084 SMCR5Q8TEV8 140 aa3.02□□□□□ -1.93
CHD9-201ENST00000219084 LRCOL1A6NCL2 159 aa3.02□□□□□ -1.93
CHD9-201ENST00000219084 C1orf134Q5TEV5 83 aa3.01□□□□□ -1.93
CHD9-201ENST00000219084 FSHBP01225 129 aa3.01□□□□□ -1.93
CHD9-201ENST00000219084 ITPR1Q14643 2758 aa3.01□□□□□ -1.93
CHD9-201ENST00000219084 A0A1W2PPR1 153 aa3.01□□□□□ -1.93
CHD9-201ENST00000219084 C7orf65Q6ZTY9 151 aa3.01□□□□□ -1.93
CHD9-201ENST00000219084 FAM229AH3BQW9 127 aa3.01□□□□□ -1.93
CHD9-201ENST00000219084 LINC00476Q8WZB0 136 aa3.01□□□□□ -1.93
CHD9-201ENST00000219084 TLX1NBP0CAT3 122 aa3□□□□□ -1.93
CHD9-201ENST00000219084 NBEAL1Q6ZS30 2694 aa3□□□□□ -1.93
CHD9-201ENST00000219084 RETNQ9HD89 108 aa3□□□□□ -1.93
CHD9-201ENST00000219084 C4orf26Q17RF5 130 aa3□□□□□ -1.93
CHD9-201ENST00000219084 OBSCN-AS1Q96MR7 158 aa3□□□□□ -1.93
CHD9-201ENST00000219084 RETNLBQ9BQ08 111 aa3□□□□□ -1.93
CHD9-201ENST00000219084 X6R8D5 127 aa3□□□□□ -1.93
CHD9-201ENST00000219084 PRLHP81277 87 aa3□□□□□ -1.93
CHD9-201ENST00000219084 Q8NAQ8 132 aa3□□□□□ -1.93
CHD9-201ENST00000219084 ATP11AUNQ6ZP68 121 aa2.99□□□□□ -1.93
CHD9-201ENST00000219084 TM2D3Q9BRN9 247 aa2.99□□□□□ -1.93
CHD9-201ENST00000219084 LINC00313P59037 77 aa2.99□□□□□ -1.93
CHD9-201ENST00000219084 PCOTHQ58A44 107 aa2.99□□□□□ -1.93
CHD9-201ENST00000219084 PRR34Q9NV39 138 aa2.99□□□□□ -1.93
CHD9-201ENST00000219084 LINC00612Q8N6U2 182 aa2.99□□□□□ -1.93
CHD9-201ENST00000219084 CSNK1G2-AS1Q8NCQ2 148 aa2.99□□□□□ -1.93
CHD9-201ENST00000219084 PRR15Q8IV56 129 aa2.99□□□□□ -1.93
CHD9-201ENST00000219084 LINC00528Q8N1L1 170 aa2.98□□□□□ -1.93
CHD9-201ENST00000219084 ITPR2Q14571 2701 aa2.98□□□□□ -1.93
CHD9-201ENST00000219084 LY6G6CO95867 125 aa2.98□□□□□ -1.93
CHD9-201ENST00000219084 OXLD1Q5BKU9 147 aa2.98□□□□□ -1.93
CHD9-201ENST00000219084 LINC00336Q6ZUF6 198 aa2.97□□□□□ -1.93
CHD9-201ENST00000219084 CD164Q04900 197 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms