RNA–Protein interactions for RNA: ENST00000642072.1

LINC00339-212, long intergenic non-protein coding RNA 339, humanhuman

Gene LINC00339, Length 338 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-212ENST00000642072 IFITM10A6NMD0 228 aa5.01□□□□□ -1.61
LINC00339-212ENST00000642072 TRGC2P03986 189 aa5.01□□□□□ -1.61
LINC00339-212ENST00000642072 ADIRFQ15847 76 aa5.01□□□□□ -1.61
LINC00339-212ENST00000642072 MRPL51Q4U2R6 128 aaKnown RBP5.01□□□□□ -1.61
LINC00339-212ENST00000642072 LINC00242Q5T6M2 205 aa5.01□□□□□ -1.61
LINC00339-212ENST00000642072 TMEM18Q96B42 140 aa5.01□□□□□ -1.61
LINC00339-212ENST00000642072 C20orf78Q9BR46 151 aa5.01□□□□□ -1.61
LINC00339-212ENST00000642072 OSTCQ9NRP0 149 aa5.01□□□□□ -1.61
LINC00339-212ENST00000642072 NUPR1O60356 82 aa5□□□□□ -1.61
LINC00339-212ENST00000642072 S100A2P29034 98 aa5□□□□□ -1.61
LINC00339-212ENST00000642072 NDUFA6P56556 154 aa5□□□□□ -1.61
LINC00339-212ENST00000642072 HBBP68871 147 aa5□□□□□ -1.61
LINC00339-212ENST00000642072 FAM104BQ5XKR9 115 aa5□□□□□ -1.61
LINC00339-212ENST00000642072 HIST3H2BBQ8N257 126 aa5□□□□□ -1.61
LINC00339-212ENST00000642072 V9GYV3 84 aa5□□□□□ -1.61
LINC00339-212ENST00000642072 PCP4L1A6NKN8 68 aa4.99□□□□□ -1.61
LINC00339-212ENST00000642072 CRYGAP11844 174 aa4.99□□□□□ -1.61
LINC00339-212ENST00000642072 RIGQ13278 110 aa4.99□□□□□ -1.61
LINC00339-212ENST00000642072 TPRXLQ17RH7 258 aa4.99□□□□□ -1.61
LINC00339-212ENST00000642072 KRTAP13-2Q52LG2 175 aa4.99□□□□□ -1.61
LINC00339-212ENST00000642072 RETNLBQ9BQ08 111 aa4.99□□□□□ -1.61
LINC00339-212ENST00000642072 SMIM2Q9BVW6 85 aa4.99□□□□□ -1.61
LINC00339-212ENST00000642072 C22orf24Q9Y442 160 aa4.99□□□□□ -1.61
LINC00339-212ENST00000642072 TCAPO15273 167 aa4.98□□□□□ -1.61
LINC00339-212ENST00000642072 TNFRSF6BO95407 300 aa4.98□□□□□ -1.61
LINC00339-212ENST00000642072 PYY3Q5JQD4 70 aa4.98□□□□□ -1.61
LINC00339-212ENST00000642072 TYMSOSQ8TAI1 123 aa4.98□□□□□ -1.61
LINC00339-212ENST00000642072 IGLV4-3A0A075B6K6 122 aa4.97□□□□□ -1.61
LINC00339-212ENST00000642072 BCE1O60756 84 aa4.97□□□□□ -1.61
LINC00339-212ENST00000642072 NPYP01303 97 aa4.97□□□□□ -1.61
LINC00339-212ENST00000642072 LCE2DQ5TA82 110 aaPredicted RBP4.97□□□□□ -1.61
LINC00339-212ENST00000642072 KRTAP13-1Q8IUC0 172 aa4.97□□□□□ -1.61
LINC00339-212ENST00000642072 LINC01561Q8N1V8 128 aa4.97□□□□□ -1.61
LINC00339-212ENST00000642072 PACRGQ96M98 296 aaPredicted RBP4.97□□□□□ -1.61
LINC00339-212ENST00000642072 ANAPC11Q9NYG5 84 aa4.97□□□□□ -1.61
LINC00339-212ENST00000642072 TP73-AS1Q9UF72 201 aa4.97□□□□□ -1.61
LINC00339-212ENST00000642072 NAT8BQ9UHF3 227 aa4.97□□□□□ -1.61
LINC00339-212ENST00000642072 PYGO1Q9Y3Y4 419 aa4.97□□□□□ -1.61
LINC00339-212ENST00000642072 SMIM27A0A1W2PRY6 76 aa4.96□□□□□ -1.62
LINC00339-212ENST00000642072 D6R8Y8 96 aa4.96□□□□□ -1.62
LINC00339-212ENST00000642072 CKS2P33552 79 aa4.96□□□□□ -1.62
LINC00339-212ENST00000642072 RPL28P46779 137 aaKnown RBP4.96□□□□□ -1.62
LINC00339-212ENST00000642072 JOSD1Q15040 202 aaPredicted RBP4.96□□□□□ -1.62
LINC00339-212ENST00000642072 COX19Q49B96 90 aa4.96□□□□□ -1.62
LINC00339-212ENST00000642072 LBHQ53QV2 105 aaPredicted RBP4.96□□□□□ -1.62
LINC00339-212ENST00000642072 LINC00469Q8N7U9 141 aa4.96□□□□□ -1.62
LINC00339-212ENST00000642072 HIST1H2BLQ99880 126 aa4.96□□□□□ -1.62
LINC00339-212ENST00000642072 CDIP1Q9H305 208 aa4.96□□□□□ -1.62
LINC00339-212ENST00000642072 XAGE1AQ9HD64 81 aa4.96□□□□□ -1.62
LINC00339-212ENST00000642072 LINC00587B1AMM8 73 aa4.95□□□□□ -1.62
LINC00339-212ENST00000642072 LINC00173Q6ZV60 143 aa4.95□□□□□ -1.62
LINC00339-212ENST00000642072 MRPL55Q7Z7F7 128 aaKnown RBP4.95□□□□□ -1.62
LINC00339-212ENST00000642072 IGLV7-46A0A075B6I9 117 aa4.94□□□□□ -1.62
LINC00339-212ENST00000642072 A0A1B0GW15 77 aa4.94□□□□□ -1.62
LINC00339-212ENST00000642072 A0A1B0GXF2 115 aa4.94□□□□□ -1.62
LINC00339-212ENST00000642072 FABP4P15090 132 aa4.94□□□□□ -1.62
LINC00339-212ENST00000642072 IFI27P40305 119 aaPredicted RBP4.94□□□□□ -1.62
LINC00339-212ENST00000642072 FAM229BQ4G0N7 80 aa4.94□□□□□ -1.62
LINC00339-212ENST00000642072 LINC00304Q8N9R0 145 aa4.94□□□□□ -1.62
LINC00339-212ENST00000642072 TMEM141Q96I45 108 aa4.94□□□□□ -1.62
LINC00339-212ENST00000642072 ZC2HC1BQ5TFG8 222 aa4.93□□□□□ -1.62
LINC00339-212ENST00000642072 FAM19A3Q7Z5A8 133 aa4.93□□□□□ -1.62
LINC00339-212ENST00000642072 Q8IZM0 81 aa4.93□□□□□ -1.62
LINC00339-212ENST00000642072 LINC00167Q96N53 147 aa4.93□□□□□ -1.62
LINC00339-212ENST00000642072 AMELXQ99217 191 aa4.93□□□□□ -1.62
LINC00339-212ENST00000642072 GNB1LQ9BYB4 327 aa4.93□□□□□ -1.62
LINC00339-212ENST00000642072 CRCT1Q9UGL9 99 aa4.93□□□□□ -1.62
LINC00339-212ENST00000642072 TRAPPC1Q9Y5R8 145 aa4.93□□□□□ -1.62
LINC00339-212ENST00000642072 RPL37AP8A6NKH3 93 aa4.92□□□□□ -1.62
LINC00339-212ENST00000642072 TSTD3H0UI37 97 aa4.92□□□□□ -1.62
LINC00339-212ENST00000642072 PPBPP02775 128 aa4.92□□□□□ -1.62
LINC00339-212ENST00000642072 CKS1BP61024 79 aa4.92□□□□□ -1.62
LINC00339-212ENST00000642072 Q6ZN92 141 aa4.92□□□□□ -1.62
LINC00339-212ENST00000642072 TEX43Q6ZNM6 134 aa4.92□□□□□ -1.62
LINC00339-212ENST00000642072 IGLV5-37A0A075B6J1 123 aa4.91□□□□□ -1.62
LINC00339-212ENST00000642072 PRSS47A8MTI9 375 aa4.91□□□□□ -1.62
LINC00339-212ENST00000642072 F8VRH5 84 aa4.91□□□□□ -1.62
LINC00339-212ENST00000642072 PRSS2P07478 247 aa4.91□□□□□ -1.62
LINC00339-212ENST00000642072 C6orf226Q5I0X4 101 aa4.91□□□□□ -1.62
LINC00339-212ENST00000642072 KRTAP4-1Q9BYQ7 146 aa4.91□□□□□ -1.62
LINC00339-212ENST00000642072 TOMM7Q9P0U1 55 aa4.91□□□□□ -1.62
LINC00339-212ENST00000642072 IGIPA6NJ69 53 aa4.9□□□□□ -1.63
LINC00339-212ENST00000642072 PDZD11Q5EBL8 140 aa4.9□□□□□ -1.63
LINC00339-212ENST00000642072 MRPL54Q6P161 138 aaKnown RBP4.9□□□□□ -1.63
LINC00339-212ENST00000642072 C2orf66Q6UXQ4 117 aa4.9□□□□□ -1.63
LINC00339-212ENST00000642072 ORMDL3Q8N138 153 aa4.9□□□□□ -1.63
LINC00339-212ENST00000642072 C2orf88Q9BSF0 95 aa4.9□□□□□ -1.63
LINC00339-212ENST00000642072 ALKBH7Q9BT30 221 aaPredicted RBP4.9□□□□□ -1.63
LINC00339-212ENST00000642072 PPDPFQ9H3Y8 114 aa4.9□□□□□ -1.63
LINC00339-212ENST00000642072 GAGE10A6NGK3 116 aa4.89□□□□□ -1.63
LINC00339-212ENST00000642072 NPSP0C0P6 89 aa4.89□□□□□ -1.63
LINC00339-212ENST00000642072 DDTP30046 118 aa4.89□□□□□ -1.63
LINC00339-212ENST00000642072 TMEM136Q6ZRR5 245 aa4.89□□□□□ -1.63
LINC00339-212ENST00000642072 ATP5L2Q7Z4Y8 100 aa4.89□□□□□ -1.63
LINC00339-212ENST00000642072 PRELID3AQ96N28 172 aa4.89□□□□□ -1.63
LINC00339-212ENST00000642072 MRPL18Q9H0U6 180 aaKnown RBP4.89□□□□□ -1.63
LINC00339-212ENST00000642072 CDKN2A-AS1Q9UH64 79 aa4.89□□□□□ -1.63
LINC00339-212ENST00000642072 KRTAP13-3Q3SY46 172 aa4.88□□□□□ -1.63
LINC00339-212ENST00000642072 ASB16-AS1Q495Z4 193 aa4.88□□□□□ -1.63
LINC00339-212ENST00000642072 C14orf144Q96I85 54 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms