RNA–Protein interactions for RNA: ENST00000639953.1

ATM-229, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-229ENST00000639953 FRAS1Q86XX4 4008 aa4.1□□□□□ -1.75
ATM-229ENST00000639953 A0A096LPF7 62 aa4.09□□□□□ -1.75
ATM-229ENST00000639953 TEX48A0A1B0GUV7 120 aa4.09□□□□□ -1.75
ATM-229ENST00000639953 ZNF815PA8K554 130 aa4.09□□□□□ -1.75
ATM-229ENST00000639953 F5H768 121 aa4.09□□□□□ -1.75
ATM-229ENST00000639953 J3QQQ9 107 aa4.09□□□□□ -1.75
ATM-229ENST00000639953 GAGE6Q13070 117 aa4.09□□□□□ -1.75
ATM-229ENST00000639953 LINC00242Q5T6M2 205 aa4.09□□□□□ -1.75
ATM-229ENST00000639953 VCX2Q9H322 139 aa4.09□□□□□ -1.75
ATM-229ENST00000639953 CDKN2A-AS1Q9UH64 79 aa4.09□□□□□ -1.75
ATM-229ENST00000639953 IGLV5-37A0A075B6J1 123 aa4.08□□□□□ -1.76
ATM-229ENST00000639953 TRGV2A0A075B6R0 118 aa4.08□□□□□ -1.76
ATM-229ENST00000639953 A0A0J9YXY3 114 aa4.08□□□□□ -1.76
ATM-229ENST00000639953 A0A1B0GWB2 263 aa4.08□□□□□ -1.76
ATM-229ENST00000639953 IGHV3-30P01768 117 aa4.08□□□□□ -1.76
ATM-229ENST00000639953 ATP5G1P05496 136 aa4.08□□□□□ -1.76
ATM-229ENST00000639953 IGHV3-30-3P0DP02 117 aa4.08□□□□□ -1.76
ATM-229ENST00000639953 IGHV3-30-5P0DP03 117 aa4.08□□□□□ -1.76
ATM-229ENST00000639953 CRYBA4P53673 196 aa4.08□□□□□ -1.76
ATM-229ENST00000639953 SEC11AP67812 179 aa4.08□□□□□ -1.76
ATM-229ENST00000639953 COTL1Q14019 142 aa4.08□□□□□ -1.76
ATM-229ENST00000639953 SMIM29Q86T20 159 aa4.08□□□□□ -1.76
ATM-229ENST00000639953 TMEM101Q96IK0 257 aa4.08□□□□□ -1.76
ATM-229ENST00000639953 CDC42SE2Q9NRR3 84 aa4.08□□□□□ -1.76
ATM-229ENST00000639953 NHP2Q9NX24 153 aaKnown RBP4.08□□□□□ -1.76
ATM-229ENST00000639953 IGLV5-45A0A087WSX0 123 aa4.07□□□□□ -1.76
ATM-229ENST00000639953 TINCRA0A1B0GVN0 87 aa4.07□□□□□ -1.76
ATM-229ENST00000639953 SMIM13P0DJ93 91 aa4.07□□□□□ -1.76
ATM-229ENST00000639953 VAMP3Q15836 100 aa4.07□□□□□ -1.76
ATM-229ENST00000639953 MUSTN1Q8IVN3 82 aa4.07□□□□□ -1.76
ATM-229ENST00000639953 HIST1H4GQ99525 98 aa4.07□□□□□ -1.76
ATM-229ENST00000639953 TIMM21Q9BVV7 248 aa4.07□□□□□ -1.76
ATM-229ENST00000639953 SPANXA1Q9NS26 97 aa4.07□□□□□ -1.76
ATM-229ENST00000639953 TRAV26-1A0A087WT03 109 aa4.06□□□□□ -1.76
ATM-229ENST00000639953 TRGV4A0A0C4DH28 118 aa4.06□□□□□ -1.76
ATM-229ENST00000639953 IGHV1-58A0A0C4DH39 117 aa4.06□□□□□ -1.76
ATM-229ENST00000639953 TRBV10-1A0A0K0K1A3 114 aa4.06□□□□□ -1.76
ATM-229ENST00000639953 TRBV6-4A0A1B0GX49 114 aa4.06□□□□□ -1.76
ATM-229ENST00000639953 A0A1W2PPM0 123 aa4.06□□□□□ -1.76
ATM-229ENST00000639953 CFC1BP0CG36 223 aa4.06□□□□□ -1.76
ATM-229ENST00000639953 CFC1P0CG37 223 aa4.06□□□□□ -1.76
ATM-229ENST00000639953 TAL2Q16559 108 aa4.06□□□□□ -1.76
ATM-229ENST00000639953 SFTA2Q6UW10 78 aa4.06□□□□□ -1.76
ATM-229ENST00000639953 SOSTDC1Q6X4U4 206 aa4.06□□□□□ -1.76
ATM-229ENST00000639953 FAM19A3Q7Z5A8 133 aa4.06□□□□□ -1.76
ATM-229ENST00000639953 EPPK1P58107 5090 aaKnown RBP4.06□□□□□ -1.76
ATM-229ENST00000639953 TRAV13-1A0A0B4J241 112 aa4.05□□□□□ -1.76
ATM-229ENST00000639953 LINC01549A6NIU2 74 aa4.05□□□□□ -1.76
ATM-229ENST00000639953 SMIM1B2RUZ4 78 aa4.05□□□□□ -1.76
ATM-229ENST00000639953 K7EP34 96 aa4.05□□□□□ -1.76
ATM-229ENST00000639953 CIDEAO60543 219 aa4.05□□□□□ -1.76
ATM-229ENST00000639953 NPC2P61916 151 aa4.05□□□□□ -1.76
ATM-229ENST00000639953 DAZ4Q86SG3 579 aaKnown RBP4.05□□□□□ -1.76
ATM-229ENST00000639953 DAND5Q8N907 189 aa4.05□□□□□ -1.76
ATM-229ENST00000639953 TMEM243Q9BU79 118 aa4.05□□□□□ -1.76
ATM-229ENST00000639953 GTSF1LQ9H1H1 148 aa4.05□□□□□ -1.76
ATM-229ENST00000639953 DAZ3Q9NR90 486 aaKnown RBP4.05□□□□□ -1.76
ATM-229ENST00000639953 SPANXB1Q9NS25 103 aaPredicted RBP4.05□□□□□ -1.76
ATM-229ENST00000639953 PRO0461Q9UI25 63 aa4.05□□□□□ -1.76
ATM-229ENST00000639953 DNAH10Q8IVF4 4471 aa4.04□□□□□ -1.76
ATM-229ENST00000639953 TRBV6-8A0A0A6YYG3 113 aa4.04□□□□□ -1.76
ATM-229ENST00000639953 IGKV3OR2-268A0A0C4DH90 116 aa4.04□□□□□ -1.76
ATM-229ENST00000639953 TSPAN13O95857 204 aa4.04□□□□□ -1.76
ATM-229ENST00000639953 LGALS3P17931 250 aaKnown RBP4.04□□□□□ -1.76
ATM-229ENST00000639953 PAPPA-AS1Q5QFB9 102 aa4.04□□□□□ -1.76
ATM-229ENST00000639953 MTURNQ8N3F0 131 aa4.04□□□□□ -1.76
ATM-229ENST00000639953 C15orf53Q8NAA6 179 aa4.04□□□□□ -1.76
ATM-229ENST00000639953 ZNF625Q96I27 306 aaPredicted RBP4.04□□□□□ -1.76
ATM-229ENST00000639953 A0A0U1RRA0 63 aa4.03□□□□□ -1.76
ATM-229ENST00000639953 A6NDN8 102 aa4.03□□□□□ -1.76
ATM-229ENST00000639953 M0R2N4 97 aa4.03□□□□□ -1.76
ATM-229ENST00000639953 APOMO95445 188 aa4.03□□□□□ -1.76
ATM-229ENST00000639953 HERVK_113P61574 105 aa4.03□□□□□ -1.76
ATM-229ENST00000639953 RBX1P62877 108 aa4.03□□□□□ -1.76
ATM-229ENST00000639953 WFDC2Q14508 124 aa4.03□□□□□ -1.76
ATM-229ENST00000639953 CLPSL2Q6UWE3 100 aa4.03□□□□□ -1.76
ATM-229ENST00000639953 UBE2DNLQ8IWF7 75 aa4.03□□□□□ -1.76
ATM-229ENST00000639953 ATP6V0E2Q8NHE4 81 aa4.03□□□□□ -1.76
ATM-229ENST00000639953 NDUFA12Q9UI09 145 aa4.03□□□□□ -1.76
ATM-229ENST00000639953 LINC00588Q9Y4M8 146 aa4.03□□□□□ -1.76
ATM-229ENST00000639953 CSDC2Q9Y534 153 aaKnown RBP4.03□□□□□ -1.76
ATM-229ENST00000639953 DNAH2Q9P225 4427 aa4.03□□□□□ -1.77
ATM-229ENST00000639953 GAGE10A6NGK3 116 aa4.02□□□□□ -1.77
ATM-229ENST00000639953 IGHV3-33P01772 117 aa4.02□□□□□ -1.77
ATM-229ENST00000639953 SRSF9Q13242 221 aaKnown RBP eCLIP4.02□□□□□ -1.77
ATM-229ENST00000639953 ESRGQ1W209 222 aa4.02□□□□□ -1.77
ATM-229ENST00000639953 SCGB1D4Q6XE38 83 aa4.02□□□□□ -1.77
ATM-229ENST00000639953 C5orf38Q86SI9 138 aa4.02□□□□□ -1.77
ATM-229ENST00000639953 PRO0255Q9UI72 69 aa4.02□□□□□ -1.77
ATM-229ENST00000639953 SPCS1Q9Y6A9 102 aa4.02□□□□□ -1.77
ATM-229ENST00000639953 IGHV3OR16-9A0A0B4J2B5 98 aa4.01□□□□□ -1.77
ATM-229ENST00000639953 LINC00959A0A1B0GUT2 108 aa4.01□□□□□ -1.77
ATM-229ENST00000639953 NDUFA1O15239 70 aa4.01□□□□□ -1.77
ATM-229ENST00000639953 DGAT2L7PQ6IED9 249 aa4.01□□□□□ -1.77
ATM-229ENST00000639953 CHCHD5Q9BSY4 110 aa4.01□□□□□ -1.77
ATM-229ENST00000639953 GEMIN7Q9H840 131 aaKnown RBP4.01□□□□□ -1.77
ATM-229ENST00000639953 ICOSQ9Y6W8 199 aa4.01□□□□□ -1.77
ATM-229ENST00000639953 DNAH17Q9UFH2 4485 aa4.01□□□□□ -1.77
ATM-229ENST00000639953 H3BNG1 76 aa4□□□□□ -1.77
ATM-229ENST00000639953 TCL1BO95988 128 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms