RNA–Protein interactions for RNA: ENST00000639501.1

PMS1-222, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-222ENST00000639501 C11orf68Q9H3H3 251 aaKnown RBP14.36□□□□□ -0.11
PMS1-222ENST00000639501 IGHV3OR16-9A0A0B4J2B5 98 aa14.35□□□□□ -0.11
PMS1-222ENST00000639501 HILS1P60008 231 aa14.35□□□□□ -0.11
PMS1-222ENST00000639501 RPS28P62857 69 aaKnown RBP14.35□□□□□ -0.11
PMS1-222ENST00000639501 Q6YL49 198 aa14.35□□□□□ -0.11
PMS1-222ENST00000639501 TLN2Q9Y4G6 2542 aa14.35□□□□□ -0.11
PMS1-222ENST00000639501 C5orf47Q569G3 176 aa14.35□□□□□ -0.11
PMS1-222ENST00000639501 DPH3Q96FX2 82 aa14.35□□□□□ -0.11
PMS1-222ENST00000639501 A0A096LNT2 108 aa14.34□□□□□ -0.11
PMS1-222ENST00000639501 NIPBLQ6KC79 2804 aaeCLIP14.34□□□□□ -0.11
PMS1-222ENST00000639501 FLNAP21333 2647 aaKnown RBP14.34□□□□□ -0.11
PMS1-222ENST00000639501 WFDC9Q8NEX5 89 aa14.34□□□□□ -0.11
PMS1-222ENST00000639501 CR1P17927 2039 aa14.33□□□□□ -0.12
PMS1-222ENST00000639501 IBA57-AS1B1ANH7 110 aa14.33□□□□□ -0.12
PMS1-222ENST00000639501 TMEM258P61165 79 aa14.33□□□□□ -0.12
PMS1-222ENST00000639501 JMJD1CQ15652 2540 aa14.32□□□□□ -0.12
PMS1-222ENST00000639501 C4orf3Q8WVX3 66 aa14.32□□□□□ -0.12
PMS1-222ENST00000639501 TRBV6-4A0A1B0GX49 114 aa14.3□□□□□ -0.12
PMS1-222ENST00000639501 KRTAP1-3Q8IUG1 177 aa14.3□□□□□ -0.12
PMS1-222ENST00000639501 ORMDL1Q9P0S3 153 aa14.3□□□□□ -0.12
PMS1-222ENST00000639501 PLAC8L1A1L4L8 177 aa14.29□□□□□ -0.12
PMS1-222ENST00000639501 LY6G6DO95868 133 aa14.29□□□□□ -0.12
PMS1-222ENST00000639501 CCKP06307 115 aa14.29□□□□□ -0.12
PMS1-222ENST00000639501 SETXQ7Z333 2677 aaKnown RBP14.29□□□□□ -0.12
PMS1-222ENST00000639501 A0A087WZ39 114 aa14.29□□□□□ -0.12
PMS1-222ENST00000639501 TRGV2A0A075B6R0 118 aa14.27□□□□□ -0.13
PMS1-222ENST00000639501 FSHBP01225 129 aa14.27□□□□□ -0.13
PMS1-222ENST00000639501 FHL2Q14192 279 aa14.27□□□□□ -0.13
PMS1-222ENST00000639501 PRR3P79522 188 aaKnown RBP14.26□□□□□ -0.13
PMS1-222ENST00000639501 WFDC11Q8NEX6 87 aa14.26□□□□□ -0.13
PMS1-222ENST00000639501 GIG44P09565 113 aaPredicted RBP14.26□□□□□ -0.13
PMS1-222ENST00000639501 FLNBO75369 2602 aaKnown RBP14.26□□□□□ -0.13
PMS1-222ENST00000639501 ACANP16112 2415 aa14.26□□□□□ -0.13
PMS1-222ENST00000639501 NANOS2P60321 138 aaKnown RBP14.25□□□□□ -0.13
PMS1-222ENST00000639501 FAM19A1Q7Z5A9 133 aa14.25□□□□□ -0.13
PMS1-222ENST00000639501 J3QLI3 93 aa14.24□□□□□ -0.13
PMS1-222ENST00000639501 WFDC10AQ9H1F0 79 aa14.24□□□□□ -0.13
PMS1-222ENST00000639501 TRAV23DV6A0A075B6W5 121 aa14.24□□□□□ -0.13
PMS1-222ENST00000639501 TRBV6-8A0A0A6YYG3 113 aa14.24□□□□□ -0.13
PMS1-222ENST00000639501 C11orf44Q8N8P7 122 aa14.24□□□□□ -0.13
PMS1-222ENST00000639501 IGHV4-31P0DP07 118 aa14.23□□□□□ -0.13
PMS1-222ENST00000639501 GHRHP01286 108 aa14.22□□□□□ -0.13
PMS1-222ENST00000639501 LINC00167Q96N53 147 aa14.22□□□□□ -0.13
PMS1-222ENST00000639501 SONP18583 2426 aaKnown RBP14.22□□□□□ -0.13
PMS1-222ENST00000639501 TRGV4A0A0C4DH28 118 aa14.21□□□□□ -0.13
PMS1-222ENST00000639501 A0A1W2PRX2 142 aa14.21□□□□□ -0.13
PMS1-222ENST00000639501 C6orf226Q5I0X4 101 aa14.21□□□□□ -0.13
PMS1-222ENST00000639501 LINC00959A0A1B0GUT2 108 aa14.21□□□□□ -0.13
PMS1-222ENST00000639501 ENHOQ6UWT2 76 aa14.21□□□□□ -0.13
PMS1-222ENST00000639501 C4orf26Q17RF5 130 aa14.2□□□□□ -0.14
PMS1-222ENST00000639501 XCL1P47992 114 aa14.2□□□□□ -0.14
PMS1-222ENST00000639501 Q8N814 137 aa14.2□□□□□ -0.14
PMS1-222ENST00000639501 NF1P21359 2839 aa14.2□□□□□ -0.14
PMS1-222ENST00000639501 Q5XG85 94 aa14.18□□□□□ -0.14
PMS1-222ENST00000639501 CLPSL2Q6UWE3 100 aa14.18□□□□□ -0.14
PMS1-222ENST00000639501 C16orf74Q96GX8 76 aa14.17□□□□□ -0.14
PMS1-222ENST00000639501 RPL35AP18077 110 aaKnown RBP14.17□□□□□ -0.14
PMS1-222ENST00000639501 JMJD7-PLA2G4BH0Y9G9 81 aa14.15□□□□□ -0.14
PMS1-222ENST00000639501 RNASE1P07998 156 aaKnown RBP14.15□□□□□ -0.14
PMS1-222ENST00000639501 TRAV25A0A0B4J276 109 aa14.15□□□□□ -0.14
PMS1-222ENST00000639501 OTOGQ6ZRI0 2925 aa14.15□□□□□ -0.14
PMS1-222ENST00000639501 LYPD5Q6UWN5 251 aa14.14□□□□□ -0.15
PMS1-222ENST00000639501 TMEM86BQ8N661 226 aa14.14□□□□□ -0.15
PMS1-222ENST00000639501 Q8NDZ9 215 aa14.14□□□□□ -0.15
PMS1-222ENST00000639501 S100A7L2Q5SY68 101 aa14.13□□□□□ -0.15
PMS1-222ENST00000639501 ATP5EP2Q5VTU8 51 aa14.13□□□□□ -0.15
PMS1-222ENST00000639501 HRCT1Q6UXD1 115 aa14.13□□□□□ -0.15
PMS1-222ENST00000639501 C20orf197Q8N268 126 aa14.13□□□□□ -0.15
PMS1-222ENST00000639501 TMEM256-PLSCR3K7ERE1 68 aa14.12□□□□□ -0.15
PMS1-222ENST00000639501 SETD2Q9BYW2 2564 aaPredicted RBP14.12□□□□□ -0.15
PMS1-222ENST00000639501 Q8IZM0 81 aa14.11□□□□□ -0.15
PMS1-222ENST00000639501 M0R2N4 97 aa14.11□□□□□ -0.15
PMS1-222ENST00000639501 MTORP42345 2549 aa14.11□□□□□ -0.15
PMS1-222ENST00000639501 CSNK1G2-AS1Q8NCQ2 148 aa14.1□□□□□ -0.15
PMS1-222ENST00000639501 CCL24O00175 119 aa14.09□□□□□ -0.15
PMS1-222ENST00000639501 C9orf116Q5BN46 136 aaPredicted RBP14.09□□□□□ -0.15
PMS1-222ENST00000639501 C6orf99Q4VX62 202 aa14.09□□□□□ -0.15
PMS1-222ENST00000639501 UBL5Q9BZL1 73 aa14.08□□□□□ -0.16
PMS1-222ENST00000639501 FN1P02751 2386 aaKnown RBP14.07□□□□□ -0.16
PMS1-222ENST00000639501 BAHCC1Q9P281 2608 aa14.07□□□□□ -0.16
PMS1-222ENST00000639501 NDUFC2O95298 119 aa14.07□□□□□ -0.16
PMS1-222ENST00000639501 SPATA3Q8NHX4 192 aa14.07□□□□□ -0.16
PMS1-222ENST00000639501 WIPF1O43516 503 aa14.05□□□□□ -0.16
PMS1-222ENST00000639501 DEFB130BP0DP73 79 aa14.05□□□□□ -0.16
PMS1-222ENST00000639501 DEFB130AP0DP74 79 aa14.05□□□□□ -0.16
PMS1-222ENST00000639501 KIAA0087Q14695 138 aa14.05□□□□□ -0.16
PMS1-222ENST00000639501 A0A096LPF7 62 aa14.05□□□□□ -0.16
PMS1-222ENST00000639501 Q6ZQT0 140 aa14.05□□□□□ -0.16
PMS1-222ENST00000639501 C19orf73Q9NVV2 129 aa14.05□□□□□ -0.16
PMS1-222ENST00000639501 NDUFC2-KCTD14E9PQ53 114 aa14.04□□□□□ -0.16
PMS1-222ENST00000639501 KRTAP1-1Q07627 177 aa14.04□□□□□ -0.16
PMS1-222ENST00000639501 TRBV10-3A0A0K0K1G6 114 aa14.03□□□□□ -0.16
PMS1-222ENST00000639501 GYPEP15421 78 aa14.03□□□□□ -0.16
PMS1-222ENST00000639501 Q8N3U1 123 aa14.02□□□□□ -0.16
PMS1-222ENST00000639501 FAM236DA0A1B0GTK5 79 aa14.02□□□□□ -0.17
PMS1-222ENST00000639501 FAM236CP0DP71 79 aa14.02□□□□□ -0.17
PMS1-222ENST00000639501 H7BZZ5 65 aa14.01□□□□□ -0.17
PMS1-222ENST00000639501 LINC00575Q6W349 94 aa14.01□□□□□ -0.17
PMS1-222ENST00000639501 IGLV10-54A0A075B6I4 117 aa14.01□□□□□ -0.17
PMS1-222ENST00000639501 SMR3AQ99954 134 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms