RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 IGHV1-3A0A0C4DH29 117 aa3.01□□□□□ -1.93
SCN3A-209ENST00000639244 INSP01308 110 aa3.01□□□□□ -1.93
SCN3A-209ENST00000639244 ROMO1P60602 79 aa3.01□□□□□ -1.93
SCN3A-209ENST00000639244 LINC00476Q8WZB0 136 aa3.01□□□□□ -1.93
SCN3A-209ENST00000639244 MSRB1Q9NZV6 116 aa3.01□□□□□ -1.93
SCN3A-209ENST00000639244 IGLV4-69A0A075B6H9 119 aa3.01□□□□□ -1.93
SCN3A-209ENST00000639244 IGHV3-38A0A0C4DH36 116 aa3.01□□□□□ -1.93
SCN3A-209ENST00000639244 PRAC1Q96KF2 57 aa3.01□□□□□ -1.93
SCN3A-209ENST00000639244 TEX15Q9BXT5 2789 aa3.01□□□□□ -1.93
SCN3A-209ENST00000639244 NDUFA4O00483 81 aa3.01□□□□□ -1.93
SCN3A-209ENST00000639244 KLK9Q9UKQ9 250 aa3.01□□□□□ -1.93
SCN3A-209ENST00000639244 IGLV2-18A0A075B6J9 118 aa3.01□□□□□ -1.93
SCN3A-209ENST00000639244 IGHV4-28A0A0C4DH34 117 aa3.01□□□□□ -1.93
SCN3A-209ENST00000639244 PRCDQ00LT1 54 aa3.01□□□□□ -1.93
SCN3A-209ENST00000639244 LENEPQ9Y5L5 61 aa3.01□□□□□ -1.93
SCN3A-209ENST00000639244 LHBP01229 141 aa3□□□□□ -1.93
SCN3A-209ENST00000639244 RPL36AP83881 106 aaKnown RBP3□□□□□ -1.93
SCN3A-209ENST00000639244 RPL36ALQ969Q0 106 aaKnown RBP3□□□□□ -1.93
SCN3A-209ENST00000639244 GAFA1Q96PS6 74 aa3□□□□□ -1.93
SCN3A-209ENST00000639244 CHD6Q8TD26 2715 aa3□□□□□ -1.93
SCN3A-209ENST00000639244 CMC4P56277 68 aaPredicted RBP3□□□□□ -1.93
SCN3A-209ENST00000639244 HIGD2AQ9BW72 106 aa3□□□□□ -1.93
SCN3A-209ENST00000639244 SUMO4Q6EEV6 95 aa3□□□□□ -1.93
SCN3A-209ENST00000639244 LYPD2Q6UXB3 125 aa3□□□□□ -1.93
SCN3A-209ENST00000639244 CENPFP49454 3210 aa3□□□□□ -1.93
SCN3A-209ENST00000639244 Q8N9P0 234 aaPredicted RBP3□□□□□ -1.93
SCN3A-209ENST00000639244 LINC00308Q8TCZ7 52 aa3□□□□□ -1.93
SCN3A-209ENST00000639244 WFDC10AQ9H1F0 79 aa3□□□□□ -1.93
SCN3A-209ENST00000639244 TRAV10A0A0B4J240 114 aa3□□□□□ -1.93
SCN3A-209ENST00000639244 IGHV1-46P01743 117 aa3□□□□□ -1.93
SCN3A-209ENST00000639244 IGHV4-30-4P0DP06 118 aa3□□□□□ -1.93
SCN3A-209ENST00000639244 DEFB130BP0DP73 79 aa3□□□□□ -1.93
SCN3A-209ENST00000639244 DEFB130AP0DP74 79 aa3□□□□□ -1.93
SCN3A-209ENST00000639244 REG3GQ6UW15 175 aa3□□□□□ -1.93
SCN3A-209ENST00000639244 COX7B2Q8TF08 81 aa3□□□□□ -1.93
SCN3A-209ENST00000639244 FLVCR1-AS1Q8TAF5 88 aa3□□□□□ -1.93
SCN3A-209ENST00000639244 C11orf21Q9P2W6 132 aa3□□□□□ -1.93
SCN3A-209ENST00000639244 Q6ZPA2 131 aa2.99□□□□□ -1.93
SCN3A-209ENST00000639244 PLA2G2DQ9UNK4 145 aa2.99□□□□□ -1.93
SCN3A-209ENST00000639244 C8orf17Q9NRJ1 99 aa2.99□□□□□ -1.93
SCN3A-209ENST00000639244 IGLV3-19P01714 112 aa2.99□□□□□ -1.93
SCN3A-209ENST00000639244 SPANXA2-OT1Q8N9U9 137 aa2.99□□□□□ -1.93
SCN3A-209ENST00000639244 RPL37AP8A6NKH3 93 aa2.99□□□□□ -1.93
SCN3A-209ENST00000639244 DSCR9P59020 149 aa2.99□□□□□ -1.93
SCN3A-209ENST00000639244 GCN1Q92616 2671 aaKnown RBP2.99□□□□□ -1.93
SCN3A-209ENST00000639244 IGHV4-4A0A075B6R2 117 aa2.99□□□□□ -1.93
SCN3A-209ENST00000639244 LOC110117498A0A087WWA1 95 aa2.99□□□□□ -1.93
SCN3A-209ENST00000639244 CHD9Q3L8U1 2897 aa2.98□□□□□ -1.93
SCN3A-209ENST00000639244 NDUFA1O15239 70 aa2.98□□□□□ -1.93
SCN3A-209ENST00000639244 IGLV2-14P01704 120 aa2.98□□□□□ -1.93
SCN3A-209ENST00000639244 ARTNQ5T4W7 220 aa2.98□□□□□ -1.93
SCN3A-209ENST00000639244 Q9BRP9 147 aa2.98□□□□□ -1.93
SCN3A-209ENST00000639244 ANKRD11Q6UB99 2663 aaPredicted RBP2.98□□□□□ -1.93
SCN3A-209ENST00000639244 IGHV4-38-2P0DP08 117 aa2.98□□□□□ -1.93
SCN3A-209ENST00000639244 COL4A4P53420 1690 aaPredicted RBP2.98□□□□□ -1.93
SCN3A-209ENST00000639244 PLA2G5P39877 138 aa2.98□□□□□ -1.93
SCN3A-209ENST00000639244 DEFB112Q30KQ8 113 aa2.98□□□□□ -1.93
SCN3A-209ENST00000639244 TRANK1O15050 2925 aa2.98□□□□□ -1.93
SCN3A-209ENST00000639244 CLPSP04118 112 aa2.98□□□□□ -1.93
SCN3A-209ENST00000639244 DEFB114Q30KQ6 69 aa2.98□□□□□ -1.93
SCN3A-209ENST00000639244 SPINK13Q1W4C9 94 aa2.98□□□□□ -1.93
SCN3A-209ENST00000639244 H3BUX3 64 aa2.98□□□□□ -1.93
SCN3A-209ENST00000639244 IGLV1-51P01701 117 aa2.98□□□□□ -1.93
SCN3A-209ENST00000639244 SRRM5B3KS81 715 aa2.97□□□□□ -1.93
SCN3A-209ENST00000639244 C17orf82Q86X59 251 aaPredicted RBP2.97□□□□□ -1.93
SCN3A-209ENST00000639244 OCR1Q9BZK8 76 aa2.97□□□□□ -1.93
SCN3A-209ENST00000639244 SETXQ7Z333 2677 aaKnown RBP2.97□□□□□ -1.93
SCN3A-209ENST00000639244 H0Y9P7 68 aa2.97□□□□□ -1.93
SCN3A-209ENST00000639244 IGLV3-1P01715 115 aa2.97□□□□□ -1.93
SCN3A-209ENST00000639244 KMT2BQ9UMN6 2715 aaPredicted RBP2.97□□□□□ -1.93
SCN3A-209ENST00000639244 IGKV1OR2-108A0A075B7D4 117 aa2.97□□□□□ -1.93
SCN3A-209ENST00000639244 C9orf66Q5T8R8 295 aa2.97□□□□□ -1.93
SCN3A-209ENST00000639244 G3V318 75 aa2.97□□□□□ -1.93
SCN3A-209ENST00000639244 ZFAND2AQ8N6M9 145 aa2.97□□□□□ -1.93
SCN3A-209ENST00000639244 NBEAL1Q6ZS30 2694 aa2.97□□□□□ -1.93
SCN3A-209ENST00000639244 COL4A2P08572 1712 aa2.97□□□□□ -1.93
SCN3A-209ENST00000639244 LY6G6EA0A0G2JKS1 128 aa2.97□□□□□ -1.93
SCN3A-209ENST00000639244 CTSGP08311 255 aa2.96□□□□□ -1.93
SCN3A-209ENST00000639244 PRR4Q16378 134 aa2.96□□□□□ -1.93
SCN3A-209ENST00000639244 UBE2DNLQ8IWF7 75 aa2.96□□□□□ -1.93
SCN3A-209ENST00000639244 DEFB105AQ8NG35 78 aa2.96□□□□□ -1.93
SCN3A-209ENST00000639244 TEP1Q99973 2627 aaKnown RBP2.96□□□□□ -1.94
SCN3A-209ENST00000639244 NOTCH1P46531 2555 aa2.96□□□□□ -1.94
SCN3A-209ENST00000639244 INAFM1C9JVW0 142 aa2.96□□□□□ -1.94
SCN3A-209ENST00000639244 C9orf47Q6ZRZ4 202 aa2.96□□□□□ -1.94
SCN3A-209ENST00000639244 COL4A3Q01955 1670 aa2.96□□□□□ -1.94
SCN3A-209ENST00000639244 IGLV2-23P01705 113 aa2.96□□□□□ -1.94
SCN3A-209ENST00000639244 HIGD2BQ4VC39 106 aa2.96□□□□□ -1.94
SCN3A-209ENST00000639244 NTM-AS1Q6ZSK4 140 aa2.96□□□□□ -1.94
SCN3A-209ENST00000639244 IGLV10-54A0A075B6I4 117 aa2.95□□□□□ -1.94
SCN3A-209ENST00000639244 ETDCA0A1B0GVM5 59 aa2.95□□□□□ -1.94
SCN3A-209ENST00000639244 A8MWP4 228 aa2.95□□□□□ -1.94
SCN3A-209ENST00000639244 LITAFQ99732 161 aa2.95□□□□□ -1.94
SCN3A-209ENST00000639244 CLPSL1A2RUU4 121 aa2.95□□□□□ -1.94
SCN3A-209ENST00000639244 NPBQ8NG41 125 aa2.95□□□□□ -1.94
SCN3A-209ENST00000639244 RHPN1-AS1Q9BWJ2 59 aa2.95□□□□□ -1.94
SCN3A-209ENST00000639244 C22orf24Q9Y442 160 aa2.95□□□□□ -1.94
SCN3A-209ENST00000639244 EP400Q96L91 3159 aa2.95□□□□□ -1.94
SCN3A-209ENST00000639244 DEFB131AP59861 70 aa2.95□□□□□ -1.94
SCN3A-209ENST00000639244 MIR22HGQ0VDD5 57 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms