RNA–Protein interactions for RNA: ENST00000639240.1

ATM-228, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-228ENST00000639240 C5P01031 1676 aa0.28□□□□□ -2.36
ATM-228ENST00000639240 PPRC1Q5VV67 1664 aaKnown RBP0.28□□□□□ -2.36
ATM-228ENST00000639240 KMT2DO14686 5537 aa0.28□□□□□ -2.36
ATM-228ENST00000639240 SPINK1P00995 79 aa0.28□□□□□ -2.36
ATM-228ENST00000639240 Q5VSD8 79 aa0.28□□□□□ -2.36
ATM-228ENST00000639240 CEP162Q5TB80 1403 aa0.28□□□□□ -2.37
ATM-228ENST00000639240 EDC4Q6P2E9 1401 aaKnown RBP0.28□□□□□ -2.37
ATM-228ENST00000639240 ATP10BO94823 1461 aa0.28□□□□□ -2.37
ATM-228ENST00000639240 ZNF292O60281 2723 aa0.28□□□□□ -2.37
ATM-228ENST00000639240 CUX1P39880 1505 aa0.28□□□□□ -2.37
ATM-228ENST00000639240 SMARCA2P51531 1590 aa0.28□□□□□ -2.37
ATM-228ENST00000639240 SETBP1Q9Y6X0 1596 aa0.28□□□□□ -2.37
ATM-228ENST00000639240 PTPRZ1P23471 2315 aaPredicted RBP0.27□□□□□ -2.37
ATM-228ENST00000639240 KNDC1Q76NI1 1749 aa0.27□□□□□ -2.37
ATM-228ENST00000639240 PIEZO2Q9H5I5 2752 aa0.27□□□□□ -2.37
ATM-228ENST00000639240 LINC00959A0A1B0GUT2 108 aa0.27□□□□□ -2.37
ATM-228ENST00000639240 C7orf77A4D0Y5 90 aa0.27□□□□□ -2.37
ATM-228ENST00000639240 GYPAP02724 150 aa0.27□□□□□ -2.37
ATM-228ENST00000639240 WFDC2Q14508 124 aa0.27□□□□□ -2.37
ATM-228ENST00000639240 ANKRD17O75179 2603 aaKnown RBP0.27□□□□□ -2.37
ATM-228ENST00000639240 LRRC37AA6NMS7 1700 aa0.27□□□□□ -2.37
ATM-228ENST00000639240 UBR1Q8IWV7 1749 aa0.27□□□□□ -2.37
ATM-228ENST00000639240 CRYBG1Q9Y4K1 1723 aa0.27□□□□□ -2.37
ATM-228ENST00000639240 OTOGQ6ZRI0 2925 aa0.27□□□□□ -2.37
ATM-228ENST00000639240 MYH4Q9Y623 1939 aa0.26□□□□□ -2.37
ATM-228ENST00000639240 A0A087WVE0 104 aa0.26□□□□□ -2.37
ATM-228ENST00000639240 H3BQF6 201 aa0.26□□□□□ -2.37
ATM-228ENST00000639240 HMGN3Q15651 99 aa0.26□□□□□ -2.37
ATM-228ENST00000639240 RGPD3A6NKT7 1758 aaPredicted RBP0.26□□□□□ -2.37
ATM-228ENST00000639240 MAST4O15021 2626 aa0.25□□□□□ -2.37
ATM-228ENST00000639240 IGF2RP11717 2491 aa0.25□□□□□ -2.37
ATM-228ENST00000639240 GOLGA4Q13439 2230 aaKnown RBP0.25□□□□□ -2.37
ATM-228ENST00000639240 ANKRD36A6QL64 1941 aa0.25□□□□□ -2.37
ATM-228ENST00000639240 TSC2P49815 1807 aa0.25□□□□□ -2.37
ATM-228ENST00000639240 PPLO60437 1756 aa0.25□□□□□ -2.37
ATM-228ENST00000639240 ALKQ9UM73 1620 aa0.25□□□□□ -2.37
ATM-228ENST00000639240 RB1CC1Q8TDY2 1594 aa0.25□□□□□ -2.37
ATM-228ENST00000639240 UQCRHLA0A096LP55 91 aa0.25□□□□□ -2.37
ATM-228ENST00000639240 LCN9Q8WX39 176 aa0.25□□□□□ -2.37
ATM-228ENST00000639240 CCDC141Q6ZP82 1450 aa0.24□□□□□ -2.37
ATM-228ENST00000639240 USF3Q68DE3 2245 aa0.24□□□□□ -2.37
ATM-228ENST00000639240 H0Y9P7 68 aa0.24□□□□□ -2.37
ATM-228ENST00000639240 ARMS2P0C7Q2 107 aa0.24□□□□□ -2.37
ATM-228ENST00000639240 FAUP35544 74 aaKnown RBP0.24□□□□□ -2.37
ATM-228ENST00000639240 ALKAL2Q6UX46 152 aa0.24□□□□□ -2.37
ATM-228ENST00000639240 FDCSPQ8NFU4 85 aa0.24□□□□□ -2.37
ATM-228ENST00000639240 UNC79Q9P2D8 2635 aa0.24□□□□□ -2.37
ATM-228ENST00000639240 DNAJC13O75165 2243 aa0.23□□□□□ -2.37
ATM-228ENST00000639240 SAMD9Q5K651 1589 aa0.23□□□□□ -2.37
ATM-228ENST00000639240 CSMD3Q7Z407 3707 aa0.23□□□□□ -2.37
ATM-228ENST00000639240 COX6B1P14854 86 aa0.23□□□□□ -2.37
ATM-228ENST00000639240 ETDBQ3ZM63 59 aa0.23□□□□□ -2.37
ATM-228ENST00000639240 U3KQA8 63 aa0.23□□□□□ -2.37
ATM-228ENST00000639240 V9GYS6 101 aa0.23□□□□□ -2.37
ATM-228ENST00000639240 PKD1L3Q7Z443 1732 aa0.23□□□□□ -2.37
ATM-228ENST00000639240 DOPEY2Q9Y3R5 2298 aa0.22□□□□□ -2.37
ATM-228ENST00000639240 A0A1B0GU69 56 aa0.22□□□□□ -2.37
ATM-228ENST00000639240 ZNF720Q7Z2F6 126 aa0.22□□□□□ -2.37
ATM-228ENST00000639240 C6orf201Q7Z4U5 140 aa0.22□□□□□ -2.37
ATM-228ENST00000639240 MAP3K4Q9Y6R4 1608 aa0.22□□□□□ -2.37
ATM-228ENST00000639240 NCOR2Q9Y618 2525 aa0.22□□□□□ -2.37
ATM-228ENST00000639240 FXYD6-FXYD2A0A087WZ82 144 aa0.21□□□□□ -2.38
ATM-228ENST00000639240 K7EQZ3 153 aa0.21□□□□□ -2.38
ATM-228ENST00000639240 CFDP00746 253 aaPredicted RBP0.21□□□□□ -2.38
ATM-228ENST00000639240 SPRR1AP35321 89 aa0.21□□□□□ -2.38
ATM-228ENST00000639240 DEFB109BQ30KR1 87 aa0.21□□□□□ -2.38
ATM-228ENST00000639240 USMG5Q96IX5 58 aa0.21□□□□□ -2.38
ATM-228ENST00000639240 KIF20BQ96Q89 1820 aa0.21□□□□□ -2.38
ATM-228ENST00000639240 QSER1Q2KHR3 1735 aa0.21□□□□□ -2.38
ATM-228ENST00000639240 IGSF10Q6WRI0 2623 aa0.2□□□□□ -2.38
ATM-228ENST00000639240 SYNE1Q8NF91 8797 aaKnown RBP0.2□□□□□ -2.38
ATM-228ENST00000639240 VWFP04275 2813 aa0.2□□□□□ -2.38
ATM-228ENST00000639240 AKAP6Q13023 2319 aa0.2□□□□□ -2.38
ATM-228ENST00000639240 SLIT1O75093 1534 aa0.2□□□□□ -2.38
ATM-228ENST00000639240 PVALEFA0A1B0GWK0 134 aa0.2□□□□□ -2.38
ATM-228ENST00000639240 F8WEM9 126 aa0.2□□□□□ -2.38
ATM-228ENST00000639240 PYY3Q5JQD4 70 aa0.2□□□□□ -2.38
ATM-228ENST00000639240 DEFB107AQ8IZN7 70 aa0.2□□□□□ -2.38
ATM-228ENST00000639240 C20orf78Q9BR46 151 aa0.2□□□□□ -2.38
ATM-228ENST00000639240 Q9H521 79 aa0.2□□□□□ -2.38
ATM-228ENST00000639240 HIGD1BQ9P298 99 aa0.2□□□□□ -2.38
ATM-228ENST00000639240 NCOR1O75376 2440 aa0.2□□□□□ -2.38
ATM-228ENST00000639240 LRP1Q07954 4544 aaKnown RBP0.2□□□□□ -2.38
ATM-228ENST00000639240 PKDREJQ9NTG1 2253 aa0.2□□□□□ -2.38
ATM-228ENST00000639240 HRNRQ86YZ3 2850 aaPredicted RBP0.2□□□□□ -2.38
ATM-228ENST00000639240 COL14A1Q05707 1796 aaKnown RBP0.19□□□□□ -2.38
ATM-228ENST00000639240 FMN2Q9NZ56 1722 aa0.19□□□□□ -2.38
ATM-228ENST00000639240 GNGT1P63211 74 aa0.19□□□□□ -2.38
ATM-228ENST00000639240 PSENENQ9NZ42 101 aa0.19□□□□□ -2.38
ATM-228ENST00000639240 HIVEP3Q5T1R4 2406 aa0.19□□□□□ -2.38
ATM-228ENST00000639240 KIF14Q15058 1648 aa0.19□□□□□ -2.38
ATM-228ENST00000639240 PLIN4Q96Q06 1357 aa0.19□□□□□ -2.38
ATM-228ENST00000639240 SPTBN1Q01082 2364 aaKnown RBP0.18□□□□□ -2.38
ATM-228ENST00000639240 NKTRP30414 1462 aaKnown RBP0.18□□□□□ -2.38
ATM-228ENST00000639240 LRRC9Q6ZRR7 1453 aa0.18□□□□□ -2.38
ATM-228ENST00000639240 PTPRQQ9UMZ3 2332 aa0.18□□□□□ -2.38
ATM-228ENST00000639240 D6R8Y8 96 aa0.18□□□□□ -2.38
ATM-228ENST00000639240 HMGN2P05204 90 aaKnown RBP0.18□□□□□ -2.38
ATM-228ENST00000639240 COX8AP10176 69 aa0.18□□□□□ -2.38
ATM-228ENST00000639240 SMIM11AP58511 58 aa0.18□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms