RNA–Protein interactions for RNA: ENST00000638375.1

HLA-A-209, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 975 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-209ENST00000638375 IGKCP01834 107 aa12.51□□□□□ -0.41
HLA-A-209ENST00000638375 PRSS2P07478 247 aa12.51□□□□□ -0.41
HLA-A-209ENST00000638375 UNQ6190/PRO20217Q6UXQ8 127 aa12.51□□□□□ -0.41
HLA-A-209ENST00000638375 COX7B2Q8TF08 81 aa12.51□□□□□ -0.41
HLA-A-209ENST00000638375 NDUFA1O15239 70 aa12.5□□□□□ -0.41
HLA-A-209ENST00000638375 C6orf226Q5I0X4 101 aa12.5□□□□□ -0.41
HLA-A-209ENST00000638375 TMA7Q9Y2S6 64 aaKnown RBP12.5□□□□□ -0.41
HLA-A-209ENST00000638375 SDIM1Q6ZPB5 146 aa12.48□□□□□ -0.41
HLA-A-209ENST00000638375 C6orf48Q9UBA6 75 aa12.48□□□□□ -0.41
HLA-A-209ENST00000638375 FAM30AQ9NZY2 134 aa12.47□□□□□ -0.41
HLA-A-209ENST00000638375 APOBP04114 4563 aaKnown RBP12.46□□□□□ -0.41
HLA-A-209ENST00000638375 CXCL5P42830 114 aa12.46□□□□□ -0.41
HLA-A-209ENST00000638375 CKS1BP61024 79 aa12.46□□□□□ -0.41
HLA-A-209ENST00000638375 RNF151Q2KHN1 245 aa12.45□□□□□ -0.42
HLA-A-209ENST00000638375 TRBV30A0A0K0K1B3 111 aa12.44□□□□□ -0.42
HLA-A-209ENST00000638375 C20orf202A1L168 122 aa12.44□□□□□ -0.42
HLA-A-209ENST00000638375 C9orf116Q5BN46 136 aaPredicted RBP12.43□□□□□ -0.42
HLA-A-209ENST00000638375 Q6ZSA8 131 aa12.43□□□□□ -0.42
HLA-A-209ENST00000638375 PANO1I0J062 215 aa12.42□□□□□ -0.42
HLA-A-209ENST00000638375 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.42□□□□□ -0.42
HLA-A-209ENST00000638375 CHTF8P0CG12 524 aa12.41□□□□□ -0.42
HLA-A-209ENST00000638375 TSPEAR-AS2P59090 65 aa12.41□□□□□ -0.42
HLA-A-209ENST00000638375 HERVK_113P61574 105 aa12.41□□□□□ -0.42
HLA-A-209ENST00000638375 A0A096LNI7 61 aa12.4□□□□□ -0.42
HLA-A-209ENST00000638375 LOC107984640A0A0U1RRK4 108 aa12.4□□□□□ -0.42
HLA-A-209ENST00000638375 LEPROTO15243 131 aa12.4□□□□□ -0.42
HLA-A-209ENST00000638375 ZNF625Q96I27 306 aaPredicted RBP12.4□□□□□ -0.42
HLA-A-209ENST00000638375 RYR1P21817 5038 aa12.4□□□□□ -0.42
HLA-A-209ENST00000638375 TLX1NBP0CAT3 122 aa12.39□□□□□ -0.43
HLA-A-209ENST00000638375 ATOH7Q8N100 152 aa12.39□□□□□ -0.43
HLA-A-209ENST00000638375 STPG4Q8N801 248 aa12.39□□□□□ -0.43
HLA-A-209ENST00000638375 IGKV2-24A0A0C4DH68 120 aa12.38□□□□□ -0.43
HLA-A-209ENST00000638375 XGP55808 180 aa12.38□□□□□ -0.43
HLA-A-209ENST00000638375 HAMPP81172 84 aa12.38□□□□□ -0.43
HLA-A-209ENST00000638375 RPL18AQ02543 176 aaKnown RBP12.38□□□□□ -0.43
HLA-A-209ENST00000638375 CIRBPQ14011 172 aaKnown RBP12.38□□□□□ -0.43
HLA-A-209ENST00000638375 PLEKHB2Q96CS7 222 aa12.38□□□□□ -0.43
HLA-A-209ENST00000638375 PKIGQ9Y2B9 76 aa12.38□□□□□ -0.43
HLA-A-209ENST00000638375 E9PLD3 99 aa12.37□□□□□ -0.43
HLA-A-209ENST00000638375 PTTG1IPP53801 180 aa12.37□□□□□ -0.43
HLA-A-209ENST00000638375 GAGE2BQ13066 116 aa12.37□□□□□ -0.43
HLA-A-209ENST00000638375 Q6ZRP5 223 aa12.37□□□□□ -0.43
HLA-A-209ENST00000638375 KIAA1109Q2LD37 5005 aa12.36□□□□□ -0.43
HLA-A-209ENST00000638375 J3QQQ9 107 aa12.36□□□□□ -0.43
HLA-A-209ENST00000638375 CDK2AP2O75956 126 aa12.36□□□□□ -0.43
HLA-A-209ENST00000638375 SPACA4Q8TDM5 124 aa12.36□□□□□ -0.43
HLA-A-209ENST00000638375 NDUFC2-KCTD14E9PQ53 114 aa12.35□□□□□ -0.43
HLA-A-209ENST00000638375 AKR1D1P51857 326 aa12.35□□□□□ -0.43
HLA-A-209ENST00000638375 NDUFA12Q9UI09 145 aa12.35□□□□□ -0.43
HLA-A-209ENST00000638375 SFTA2Q6UW10 78 aa12.34□□□□□ -0.43
HLA-A-209ENST00000638375 SCXQ7RTU7 201 aa12.34□□□□□ -0.43
HLA-A-209ENST00000638375 IGKV2D-26A0A0A0MRZ7 120 aa12.33□□□□□ -0.44
HLA-A-209ENST00000638375 SCGB1D1O95968 90 aa12.33□□□□□ -0.44
HLA-A-209ENST00000638375 MAJINQ3KP22 176 aa12.33□□□□□ -0.44
HLA-A-209ENST00000638375 GAGE2EQ4V326 116 aa12.33□□□□□ -0.44
HLA-A-209ENST00000638375 ANKRD39Q53RE8 183 aa12.33□□□□□ -0.44
HLA-A-209ENST00000638375 GAGE2DQ9UEU5 116 aa12.33□□□□□ -0.44
HLA-A-209ENST00000638375 HSPG2P98160 4391 aa12.32□□□□□ -0.44
HLA-A-209ENST00000638375 LGALS3P17931 250 aaKnown RBP12.32□□□□□ -0.44
HLA-A-209ENST00000638375 CIRBP-AS1Q8TBR5 109 aa12.32□□□□□ -0.44
HLA-A-209ENST00000638375 ERG28Q9UKR5 140 aa12.32□□□□□ -0.44
HLA-A-209ENST00000638375 MYMXA0A1B0GTQ4 84 aa12.31□□□□□ -0.44
HLA-A-209ENST00000638375 LINC00474Q9P2X8 69 aa12.31□□□□□ -0.44
HLA-A-209ENST00000638375 A0A087WYN8 130 aa12.3□□□□□ -0.44
HLA-A-209ENST00000638375 PFN2P35080 140 aa12.3□□□□□ -0.44
HLA-A-209ENST00000638375 NMUP48645 174 aa12.3□□□□□ -0.44
HLA-A-209ENST00000638375 HERV-K104P63124 156 aa12.29□□□□□ -0.44
HLA-A-209ENST00000638375 DPH3Q96FX2 82 aa12.29□□□□□ -0.44
HLA-A-209ENST00000638375 C9orf129Q5T035 196 aaKnown RBP12.28□□□□□ -0.44
HLA-A-209ENST00000638375 TTTY13Q9BZ97 58 aa12.28□□□□□ -0.44
HLA-A-209ENST00000638375 PLAC8Q9NZF1 115 aa12.28□□□□□ -0.44
HLA-A-209ENST00000638375 COX17Q14061 63 aa12.27□□□□□ -0.45
HLA-A-209ENST00000638375 JOSD1Q15040 202 aaPredicted RBP12.27□□□□□ -0.45
HLA-A-209ENST00000638375 XAGE1AQ9HD64 81 aa12.27□□□□□ -0.45
HLA-A-209ENST00000638375 A0A1W2PNN7 141 aa12.26□□□□□ -0.45
HLA-A-209ENST00000638375 MEIG1Q5JSS6 88 aa12.26□□□□□ -0.45
HLA-A-209ENST00000638375 A0A0U1RRA0 63 aa12.25□□□□□ -0.45
HLA-A-209ENST00000638375 FAM168BA1KXE4 195 aa12.25□□□□□ -0.45
HLA-A-209ENST00000638375 SMIM13P0DJ93 91 aa12.25□□□□□ -0.45
HLA-A-209ENST00000638375 HERC2O95714 4834 aa12.24□□□□□ -0.45
HLA-A-209ENST00000638375 EPM2AB3EWF7 344 aa12.24□□□□□ -0.45
HLA-A-209ENST00000638375 LINC00158P58513 81 aa12.24□□□□□ -0.45
HLA-A-209ENST00000638375 A0A0J9YXY3 114 aa12.23□□□□□ -0.45
HLA-A-209ENST00000638375 ZNF815PA8K554 130 aa12.23□□□□□ -0.45
HLA-A-209ENST00000638375 HSBP1L1C9JCN9 74 aa12.23□□□□□ -0.45
HLA-A-209ENST00000638375 KRTAP7-1Q8IUC3 87 aa12.23□□□□□ -0.45
HLA-A-209ENST00000638375 KRTAP17-1Q9BYP8 105 aa12.23□□□□□ -0.45
HLA-A-209ENST00000638375 SMR3BP02814 79 aaPredicted RBP12.22□□□□□ -0.45
HLA-A-209ENST00000638375 PYY3Q5JQD4 70 aa12.22□□□□□ -0.45
HLA-A-209ENST00000638375 PCP2Q8IVA1 136 aa12.22□□□□□ -0.45
HLA-A-209ENST00000638375 SND1-IT1Q9HBX3 110 aa12.22□□□□□ -0.45
HLA-A-209ENST00000638375 LINC00587B1AMM8 73 aa12.21□□□□□ -0.45
HLA-A-209ENST00000638375 SERTAD4-AS1Q5TG53 156 aa12.2□□□□□ -0.46
HLA-A-209ENST00000638375 FAM19A5Q7Z5A7 132 aaPredicted RBP12.2□□□□□ -0.46
HLA-A-209ENST00000638375 MIR7-3HGQ8N6C7 128 aa12.2□□□□□ -0.46
HLA-A-209ENST00000638375 FAT1Q14517 4588 aa12.19□□□□□ -0.46
HLA-A-209ENST00000638375 DAND5Q8N907 189 aa12.18□□□□□ -0.46
HLA-A-209ENST00000638375 LITAFQ99732 161 aa12.17□□□□□ -0.46
HLA-A-209ENST00000638375 ADAMTSL4-AS1Q5T5F5 129 aa12.16□□□□□ -0.46
HLA-A-209ENST00000638375 LINC00528Q8N1L1 170 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 119.6 ms