RNA–Protein interactions for RNA: ENST00000638041.1

MECP2-225, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5

Gene MECP2, Length 100 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-225ENST00000638041 RPL24P83731 157 aaKnown RBP4.52□□□□□ -1.69
MECP2-225ENST00000638041 COX17Q14061 63 aa4.52□□□□□ -1.69
MECP2-225ENST00000638041 C9orf116Q5BN46 136 aaPredicted RBP4.52□□□□□ -1.69
MECP2-225ENST00000638041 NKAPP1Q8N9T2 125 aa4.52□□□□□ -1.69
MECP2-225ENST00000638041 COX7B2Q8TF08 81 aa4.52□□□□□ -1.69
MECP2-225ENST00000638041 DIRC1Q969H9 104 aa4.52□□□□□ -1.69
MECP2-225ENST00000638041 LINC00526Q96FQ7 95 aa4.52□□□□□ -1.69
MECP2-225ENST00000638041 MAP1LC3CQ9BXW4 147 aa4.52□□□□□ -1.69
MECP2-225ENST00000638041 CST9LQ9H4G1 147 aa4.52□□□□□ -1.69
MECP2-225ENST00000638041 HSPB8Q9UJY1 196 aa4.52□□□□□ -1.69
MECP2-225ENST00000638041 HERC2O95714 4834 aa4.52□□□□□ -1.69
MECP2-225ENST00000638041 KIAA1109Q2LD37 5005 aa4.51□□□□□ -1.69
MECP2-225ENST00000638041 NUPR1O60356 82 aa4.51□□□□□ -1.69
MECP2-225ENST00000638041 SLPIP03973 132 aa4.51□□□□□ -1.69
MECP2-225ENST00000638041 AKR1D1P51857 326 aa4.51□□□□□ -1.69
MECP2-225ENST00000638041 HERVK_113P61574 105 aa4.51□□□□□ -1.69
MECP2-225ENST00000638041 ODF1Q14990 250 aa4.51□□□□□ -1.69
MECP2-225ENST00000638041 TMEM170BQ5T4T1 132 aa4.51□□□□□ -1.69
MECP2-225ENST00000638041 UNQ6190/PRO20217Q6UXQ8 127 aa4.51□□□□□ -1.69
MECP2-225ENST00000638041 RYR1P21817 5038 aa4.5□□□□□ -1.69
MECP2-225ENST00000638041 HNRNPA3P51991 378 aaKnown RBP4.5□□□□□ -1.69
MECP2-225ENST00000638041 PRR3P79522 188 aaKnown RBP4.5□□□□□ -1.69
MECP2-225ENST00000638041 C1orf137Q5JT78 98 aa4.5□□□□□ -1.69
MECP2-225ENST00000638041 C18orf32Q8TCD1 76 aa4.5□□□□□ -1.69
MECP2-225ENST00000638041 CDKN2A-AS1Q9UH64 79 aa4.5□□□□□ -1.69
MECP2-225ENST00000638041 CBY1Q9Y3M2 126 aa4.5□□□□□ -1.69
MECP2-225ENST00000638041 HSPG2P98160 4391 aa4.49□□□□□ -1.69
MECP2-225ENST00000638041 A0A0J9YXV3 536 aa4.49□□□□□ -1.69
MECP2-225ENST00000638041 M0QXV9 152 aa4.49□□□□□ -1.69
MECP2-225ENST00000638041 FAM19A5Q7Z5A7 132 aaPredicted RBP4.49□□□□□ -1.69
MECP2-225ENST00000638041 KRTAP4-5Q9BYR2 181 aa4.49□□□□□ -1.69
MECP2-225ENST00000638041 TP73-AS1Q9UF72 201 aa4.49□□□□□ -1.69
MECP2-225ENST00000638041 CHTOPQ9Y3Y2 248 aaKnown RBP4.49□□□□□ -1.69
MECP2-225ENST00000638041 TRAV12-1A0A0B4J245 112 aa4.48□□□□□ -1.69
MECP2-225ENST00000638041 LEPROTL1O95214 131 aa4.48□□□□□ -1.69
MECP2-225ENST00000638041 PLNP26678 52 aa4.48□□□□□ -1.69
MECP2-225ENST00000638041 RPL13AP40429 203 aaKnown RBP4.48□□□□□ -1.69
MECP2-225ENST00000638041 HERV-K104P63124 156 aa4.48□□□□□ -1.69
MECP2-225ENST00000638041 IFI27L1Q96BM0 104 aa4.48□□□□□ -1.69
MECP2-225ENST00000638041 C6orf48Q9UBA6 75 aa4.48□□□□□ -1.69
MECP2-225ENST00000638041 IGLV5-45A0A087WSX0 123 aa4.47□□□□□ -1.69
MECP2-225ENST00000638041 SPINK8P0C7L1 97 aa4.47□□□□□ -1.69
MECP2-225ENST00000638041 IGLC3P0DOY3 106 aa4.47□□□□□ -1.69
MECP2-225ENST00000638041 RPL28P46779 137 aaKnown RBP4.47□□□□□ -1.69
MECP2-225ENST00000638041 LINC00173Q6ZV60 143 aa4.47□□□□□ -1.69
MECP2-225ENST00000638041 MIEN1Q9BRT3 115 aa4.47□□□□□ -1.69
MECP2-225ENST00000638041 MYMXA0A1B0GTQ4 84 aa4.46□□□□□ -1.7
MECP2-225ENST00000638041 SMIM1B2RUZ4 78 aa4.46□□□□□ -1.7
MECP2-225ENST00000638041 KIAA0087Q14695 138 aa4.46□□□□□ -1.7
MECP2-225ENST00000638041 MEIG1Q5JSS6 88 aa4.46□□□□□ -1.7
MECP2-225ENST00000638041 C2orf82Q6UX34 121 aa4.46□□□□□ -1.7
MECP2-225ENST00000638041 MRPL55Q7Z7F7 128 aaKnown RBP4.46□□□□□ -1.7
MECP2-225ENST00000638041 COPS9Q8WXC6 57 aa4.46□□□□□ -1.7
MECP2-225ENST00000638041 KRTAP17-1Q9BYP8 105 aa4.46□□□□□ -1.7
MECP2-225ENST00000638041 VPS13BQ7Z7G8 4022 aa4.46□□□□□ -1.7
MECP2-225ENST00000638041 APOBP04114 4563 aaKnown RBP4.46□□□□□ -1.7
MECP2-225ENST00000638041 PANO1I0J062 215 aa4.45□□□□□ -1.7
MECP2-225ENST00000638041 PFN2P35080 140 aa4.45□□□□□ -1.7
MECP2-225ENST00000638041 UBE2AP49459 152 aa4.45□□□□□ -1.7
MECP2-225ENST00000638041 LINC00158P58513 81 aa4.45□□□□□ -1.7
MECP2-225ENST00000638041 PLEKHB2Q96CS7 222 aa4.45□□□□□ -1.7
MECP2-225ENST00000638041 PSORS1C2Q9UIG4 136 aa4.45□□□□□ -1.7
MECP2-225ENST00000638041 ERG28Q9UKR5 140 aa4.45□□□□□ -1.7
MECP2-225ENST00000638041 PLA2G2DQ9UNK4 145 aa4.45□□□□□ -1.7
MECP2-225ENST00000638041 PCLOQ9Y6V0 5065 aa4.44□□□□□ -1.7
MECP2-225ENST00000638041 A0A1W2PNN7 141 aa4.44□□□□□ -1.7
MECP2-225ENST00000638041 C20orf202A1L168 122 aa4.44□□□□□ -1.7
MECP2-225ENST00000638041 H0Y8G0 127 aa4.44□□□□□ -1.7
MECP2-225ENST00000638041 TRGC2P03986 189 aa4.44□□□□□ -1.7
MECP2-225ENST00000638041 IGLV7-43P04211 117 aa4.44□□□□□ -1.7
MECP2-225ENST00000638041 NMUP48645 174 aa4.44□□□□□ -1.7
MECP2-225ENST00000638041 C10orf25Q5T742 122 aa4.44□□□□□ -1.7
MECP2-225ENST00000638041 ZC2HC1BQ5TFG8 222 aa4.44□□□□□ -1.7
MECP2-225ENST00000638041 PHF5AQ7RTV0 110 aaKnown RBP4.44□□□□□ -1.7
MECP2-225ENST00000638041 C22orf24Q9Y442 160 aa4.44□□□□□ -1.7
MECP2-225ENST00000638041 IGLV1-50A0A075B6I6 118 aa4.43□□□□□ -1.7
MECP2-225ENST00000638041 C11orf86A6NJI1 115 aa4.43□□□□□ -1.7
MECP2-225ENST00000638041 DPM2O94777 84 aa4.43□□□□□ -1.7
MECP2-225ENST00000638041 ZNF22P17026 224 aaPredicted RBP4.43□□□□□ -1.7
MECP2-225ENST00000638041 LGALS3P17931 250 aaKnown RBP4.43□□□□□ -1.7
MECP2-225ENST00000638041 HINT1P49773 126 aaPredicted RBP4.43□□□□□ -1.7
MECP2-225ENST00000638041 PMCHL1Q16048 86 aa4.43□□□□□ -1.7
MECP2-225ENST00000638041 FAM104AQ969W3 186 aa4.43□□□□□ -1.7
MECP2-225ENST00000638041 LINC01600Q96MT4 127 aa4.43□□□□□ -1.7
MECP2-225ENST00000638041 XAGE1AQ9HD64 81 aa4.43□□□□□ -1.7
MECP2-225ENST00000638041 SRRM2Q9UQ35 2752 aaKnown RBP4.42□□□□□ -1.7
MECP2-225ENST00000638041 IGLV5-39A0A0G2JS06 123 aa4.42□□□□□ -1.7
MECP2-225ENST00000638041 H0Y9J4 135 aa4.42□□□□□ -1.7
MECP2-225ENST00000638041 ZNF861PO60384 105 aa4.42□□□□□ -1.7
MECP2-225ENST00000638041 ZNF706Q9Y5V0 76 aaPredicted RBP4.42□□□□□ -1.7
MECP2-225ENST00000638041 IGKV2D-26A0A0A0MRZ7 120 aa4.41□□□□□ -1.7
MECP2-225ENST00000638041 BCE1O60756 84 aa4.41□□□□□ -1.7
MECP2-225ENST00000638041 IGKCP01834 107 aa4.41□□□□□ -1.7
MECP2-225ENST00000638041 CBLN2Q8IUK8 224 aa4.41□□□□□ -1.7
MECP2-225ENST00000638041 DNAH8Q96JB1 4490 aa4.41□□□□□ -1.7
MECP2-225ENST00000638041 IGLV5-37A0A075B6J1 123 aa4.4□□□□□ -1.71
MECP2-225ENST00000638041 TMEM223A0PJW6 202 aa4.4□□□□□ -1.71
MECP2-225ENST00000638041 FABP4P15090 132 aa4.4□□□□□ -1.71
MECP2-225ENST00000638041 C9orf129Q5T035 196 aaKnown RBP4.4□□□□□ -1.71
MECP2-225ENST00000638041 NDUFA12Q9UI09 145 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms