RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 hDV103S1A0JD37 113 aa12.22□□□□□ -0.45
CACNA1A-253ENST00000637927 MRGPRG-AS1Q2M3A8 158 aa12.21□□□□□ -0.45
CACNA1A-253ENST00000637927 TRBV7-7A0A0K0K1E9 115 aa12.21□□□□□ -0.45
CACNA1A-253ENST00000637927 NRACQ8N912 160 aa12.21□□□□□ -0.45
CACNA1A-253ENST00000637927 ACYP2P14621 99 aa12.2□□□□□ -0.46
CACNA1A-253ENST00000637927 LINC00574Q9H8X3 128 aa12.2□□□□□ -0.46
CACNA1A-253ENST00000637927 APLNQ9ULZ1 77 aa12.2□□□□□ -0.46
CACNA1A-253ENST00000637927 SPAG11AQ6PDA7 123 aa12.19□□□□□ -0.46
CACNA1A-253ENST00000637927 ZNF580Q9UK33 172 aa12.18□□□□□ -0.46
CACNA1A-253ENST00000637927 SSBP3-AS1Q7Z2R9 100 aa12.18□□□□□ -0.46
CACNA1A-253ENST00000637927 A0A1B0GU69 56 aa12.17□□□□□ -0.46
CACNA1A-253ENST00000637927 DOPEY1Q5JWR5 2465 aa12.16□□□□□ -0.46
CACNA1A-253ENST00000637927 MDFIQ99750 246 aa12.16□□□□□ -0.46
CACNA1A-253ENST00000637927 ATP5EP2Q5VTU8 51 aa12.16□□□□□ -0.46
CACNA1A-253ENST00000637927 Q8N814 137 aa12.16□□□□□ -0.46
CACNA1A-253ENST00000637927 NTM-AS1Q6ZSK4 140 aa12.16□□□□□ -0.46
CACNA1A-253ENST00000637927 C16orf90A8MZG2 172 aa12.15□□□□□ -0.46
CACNA1A-253ENST00000637927 FAM229AH3BQW9 127 aa12.15□□□□□ -0.46
CACNA1A-253ENST00000637927 FSTL3O95633 263 aa12.14□□□□□ -0.47
CACNA1A-253ENST00000637927 MRPS36P82909 103 aaKnown RBP12.14□□□□□ -0.47
CACNA1A-253ENST00000637927 NDUFC1O43677 76 aa12.14□□□□□ -0.47
CACNA1A-253ENST00000637927 IGLV1-40P01703 118 aa12.13□□□□□ -0.47
CACNA1A-253ENST00000637927 LINC01554Q52M75 96 aa12.13□□□□□ -0.47
CACNA1A-253ENST00000637927 Q96NJ1 140 aa12.13□□□□□ -0.47
CACNA1A-253ENST00000637927 CDC42SE2Q9NRR3 84 aa12.13□□□□□ -0.47
CACNA1A-253ENST00000637927 CPAMD8Q8IZJ3 1885 aa12.13□□□□□ -0.47
CACNA1A-253ENST00000637927 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.12□□□□□ -0.47
CACNA1A-253ENST00000637927 CUL9Q8IWT3 2517 aa12.12□□□□□ -0.47
CACNA1A-253ENST00000637927 ADAMTS20P59510 1910 aa12.12□□□□□ -0.47
CACNA1A-253ENST00000637927 FHL2Q14192 279 aa12.12□□□□□ -0.47
CACNA1A-253ENST00000637927 C1orf64Q8NEQ6 169 aa12.12□□□□□ -0.47
CACNA1A-253ENST00000637927 C9orf92A6NGG3 77 aa12.12□□□□□ -0.47
CACNA1A-253ENST00000637927 SMCR5Q8TEV8 140 aa12.12□□□□□ -0.47
CACNA1A-253ENST00000637927 IMUPQ9GZP8 106 aa12.12□□□□□ -0.47
CACNA1A-253ENST00000637927 RPL37AP61513 92 aaKnown RBP12.12□□□□□ -0.47
CACNA1A-253ENST00000637927 HIVEP3Q5T1R4 2406 aa12.11□□□□□ -0.47
CACNA1A-253ENST00000637927 PTPRSQ13332 1948 aa12.11□□□□□ -0.47
CACNA1A-253ENST00000637927 Q8N6K4 173 aa12.11□□□□□ -0.47
CACNA1A-253ENST00000637927 ATP5EP56381 51 aaPredicted RBP12.11□□□□□ -0.47
CACNA1A-253ENST00000637927 COX7CP15954 63 aa12.1□□□□□ -0.47
CACNA1A-253ENST00000637927 LIMD2Q9BT23 127 aa12.1□□□□□ -0.47
CACNA1A-253ENST00000637927 Q6ZRU5 148 aa12.1□□□□□ -0.47
CACNA1A-253ENST00000637927 ACACBO00763 2458 aa12.1□□□□□ -0.47
CACNA1A-253ENST00000637927 SMIM29Q86T20 159 aa12.09□□□□□ -0.47
CACNA1A-253ENST00000637927 COX17Q14061 63 aa12.09□□□□□ -0.47
CACNA1A-253ENST00000637927 PHF5AQ7RTV0 110 aaKnown RBP12.09□□□□□ -0.47
CACNA1A-253ENST00000637927 Q8N3U1 123 aa12.09□□□□□ -0.47
CACNA1A-253ENST00000637927 KLLNB2CW77 178 aa12.09□□□□□ -0.47
CACNA1A-253ENST00000637927 Q6ZSN1 163 aa12.08□□□□□ -0.48
CACNA1A-253ENST00000637927 TYMSOSQ8TAI1 123 aa12.08□□□□□ -0.48
CACNA1A-253ENST00000637927 Q8IZM0 81 aa12.08□□□□□ -0.48
CACNA1A-253ENST00000637927 ODF3L2Q3SX64 289 aa12.07□□□□□ -0.48
CACNA1A-253ENST00000637927 C22orf24Q9Y442 160 aa12.06□□□□□ -0.48
CACNA1A-253ENST00000637927 TMEM254Q8TBM7 123 aa12.05□□□□□ -0.48
CACNA1A-253ENST00000637927 LRP4O75096 1905 aa12.05□□□□□ -0.48
CACNA1A-253ENST00000637927 C2orf91Q6ZV80 131 aa12.05□□□□□ -0.48
CACNA1A-253ENST00000637927 CACNA1AO00555 2505 aa12.04□□□□□ -0.48
CACNA1A-253ENST00000637927 LYPD5Q6UWN5 251 aa12.03□□□□□ -0.48
CACNA1A-253ENST00000637927 KIAA0087Q14695 138 aa12.03□□□□□ -0.48
CACNA1A-253ENST00000637927 MYO18BQ8IUG5 2567 aa12.02□□□□□ -0.49
CACNA1A-253ENST00000637927 TRAV7A0A075B6U4 112 aa12.02□□□□□ -0.49
CACNA1A-253ENST00000637927 PRO3102Q9H379 93 aa12.01□□□□□ -0.49
CACNA1A-253ENST00000637927 TTC28Q96AY4 2481 aa12.01□□□□□ -0.49
CACNA1A-253ENST00000637927 ADAMTSL4-AS1Q5T5F5 129 aa12.01□□□□□ -0.49
CACNA1A-253ENST00000637927 CHCHD7Q9BUK0 85 aa12.01□□□□□ -0.49
CACNA1A-253ENST00000637927 POLR2KP53803 58 aaKnown RBP12□□□□□ -0.49
CACNA1A-253ENST00000637927 SMR3BP02814 79 aaPredicted RBP12□□□□□ -0.49
CACNA1A-253ENST00000637927 SMIM26A0A096LP01 95 aa11.99□□□□□ -0.49
CACNA1A-253ENST00000637927 C6orf48Q9UBA6 75 aa11.99□□□□□ -0.49
CACNA1A-253ENST00000637927 TSPEAR-AS2P59090 65 aa11.98□□□□□ -0.49
CACNA1A-253ENST00000637927 Q6JHZ5 121 aa11.98□□□□□ -0.49
CACNA1A-253ENST00000637927 ATP11AUNQ6ZP68 121 aa11.98□□□□□ -0.49
CACNA1A-253ENST00000637927 ABCA2Q9BZC7 2435 aa11.98□□□□□ -0.49
CACNA1A-253ENST00000637927 LINC00313P59037 77 aa11.97□□□□□ -0.49
CACNA1A-253ENST00000637927 EGFEM1PQ0D2K5 195 aa11.97□□□□□ -0.49
CACNA1A-253ENST00000637927 IGLV6-57P01721 117 aa11.97□□□□□ -0.49
CACNA1A-253ENST00000637927 MUC22E2RYF6 1773 aaPredicted RBP11.96□□□□□ -0.49
CACNA1A-253ENST00000637927 CCDC168Q8NDH2 2452 aa11.96□□□□□ -0.49
CACNA1A-253ENST00000637927 A0A1W2PPR1 153 aa11.96□□□□□ -0.5
CACNA1A-253ENST00000637927 SMIM1B2RUZ4 78 aa11.96□□□□□ -0.5
CACNA1A-253ENST00000637927 IGLV1-51P01701 117 aa11.95□□□□□ -0.5
CACNA1A-253ENST00000637927 IGIPA6NJ69 53 aa11.95□□□□□ -0.5
CACNA1A-253ENST00000637927 FHL3Q13643 280 aa11.94□□□□□ -0.5
CACNA1A-253ENST00000637927 A0A0D9SG42 100 aa11.94□□□□□ -0.5
CACNA1A-253ENST00000637927 RTL8CO15255 209 aa11.94□□□□□ -0.5
CACNA1A-253ENST00000637927 NAV3Q8IVL0 2385 aa11.92□□□□□ -0.5
CACNA1A-253ENST00000637927 YPEL4Q96NS1 127 aa11.9□□□□□ -0.51
CACNA1A-253ENST00000637927 FAM19A4Q96LR4 140 aa11.87□□□□□ -0.51
CACNA1A-253ENST00000637927 ST20-AS1Q8NBB2 130 aa11.86□□□□□ -0.51
CACNA1A-253ENST00000637927 ANKHD1Q8IWZ3 2542 aaKnown RBP11.85□□□□□ -0.51
CACNA1A-253ENST00000637927 C9orf129Q5T035 196 aaKnown RBP11.84□□□□□ -0.51
CACNA1A-253ENST00000637927 EP400Q96L91 3159 aa11.84□□□□□ -0.51
CACNA1A-253ENST00000637927 C16orf95Q9H693 158 aa11.84□□□□□ -0.51
CACNA1A-253ENST00000637927 C4orf26Q17RF5 130 aa11.83□□□□□ -0.51
CACNA1A-253ENST00000637927 LINC00167Q96N53 147 aa11.83□□□□□ -0.51
CACNA1A-253ENST00000637927 URB1-AS1Q96HZ7 61 aa11.83□□□□□ -0.52
CACNA1A-253ENST00000637927 GOLGB1Q14789 3259 aaKnown RBP11.83□□□□□ -0.52
CACNA1A-253ENST00000637927 LINC00315P59091 139 aa11.83□□□□□ -0.52
CACNA1A-253ENST00000637927 LINC00846Q9NV44 126 aa11.83□□□□□ -0.52
CACNA1A-253ENST00000637927 CDIP1Q9H305 208 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms