RNA–Protein interactions for RNA: ENST00000637671.1

SYNGAP1-223, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 100 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-223ENST00000637671 GAGE10A6NGK3 116 aa6.75□□□□□ -1.33
SYNGAP1-223ENST00000637671 PPBPP02775 128 aa6.75□□□□□ -1.33
SYNGAP1-223ENST00000637671 FP248Q71RG6 208 aaPredicted RBP6.74□□□□□ -1.33
SYNGAP1-223ENST00000637671 KRTAP13-1Q8IUC0 172 aa6.74□□□□□ -1.33
SYNGAP1-223ENST00000637671 NKAPP1Q8N9T2 125 aa6.74□□□□□ -1.33
SYNGAP1-223ENST00000637671 VCX2Q9H322 139 aa6.74□□□□□ -1.33
SYNGAP1-223ENST00000637671 SMIM27A0A1W2PRY6 76 aa6.73□□□□□ -1.33
SYNGAP1-223ENST00000637671 CXCL5P42830 114 aa6.73□□□□□ -1.33
SYNGAP1-223ENST00000637671 SEC11AP67812 179 aa6.72□□□□□ -1.33
SYNGAP1-223ENST00000637671 SRSF3P84103 164 aaKnown RBP6.72□□□□□ -1.33
SYNGAP1-223ENST00000637671 PNRC1Q12796 327 aaPredicted RBP6.72□□□□□ -1.33
SYNGAP1-223ENST00000637671 ASB16-AS1Q495Z4 193 aa6.72□□□□□ -1.33
SYNGAP1-223ENST00000637671 MRPL54Q6P161 138 aaKnown RBP6.72□□□□□ -1.33
SYNGAP1-223ENST00000637671 SPAG11AQ6PDA7 123 aa6.72□□□□□ -1.33
SYNGAP1-223ENST00000637671 ORMDL3Q8N138 153 aa6.72□□□□□ -1.33
SYNGAP1-223ENST00000637671 CYSLTR1Q9Y271 337 aa6.72□□□□□ -1.33
SYNGAP1-223ENST00000637671 ADIRFQ15847 76 aa6.71□□□□□ -1.34
SYNGAP1-223ENST00000637671 ALKAL2Q6UX46 152 aa6.71□□□□□ -1.34
SYNGAP1-223ENST00000637671 PRELID3AQ96N28 172 aa6.71□□□□□ -1.34
SYNGAP1-223ENST00000637671 GEMIN7Q9H840 131 aaKnown RBP6.71□□□□□ -1.34
SYNGAP1-223ENST00000637671 IGLV5-37A0A075B6J1 123 aa6.7□□□□□ -1.34
SYNGAP1-223ENST00000637671 NPSP0C0P6 89 aa6.7□□□□□ -1.34
SYNGAP1-223ENST00000637671 SEC61BP60468 96 aaKnown RBP6.7□□□□□ -1.34
SYNGAP1-223ENST00000637671 HERVK_113P63121 156 aa6.7□□□□□ -1.34
SYNGAP1-223ENST00000637671 ZC2HC1BQ5TFG8 222 aa6.7□□□□□ -1.34
SYNGAP1-223ENST00000637671 C2orf66Q6UXQ4 117 aa6.7□□□□□ -1.34
SYNGAP1-223ENST00000637671 TMEM136Q6ZRR5 245 aa6.7□□□□□ -1.34
SYNGAP1-223ENST00000637671 TCTE3Q8IZS6 198 aa6.7□□□□□ -1.34
SYNGAP1-223ENST00000637671 AMELXQ99217 191 aa6.7□□□□□ -1.34
SYNGAP1-223ENST00000637671 IGKV2-28A0A075B6P5 120 aa6.69□□□□□ -1.34
SYNGAP1-223ENST00000637671 IGKV2D-28P01615 120 aa6.69□□□□□ -1.34
SYNGAP1-223ENST00000637671 SRP19P09132 144 aaKnown RBP6.69□□□□□ -1.34
SYNGAP1-223ENST00000637671 RPL23P62829 140 aaKnown RBP6.69□□□□□ -1.34
SYNGAP1-223ENST00000637671 PRLHP81277 87 aa6.69□□□□□ -1.34
SYNGAP1-223ENST00000637671 C4orf48Q5BLP8 95 aa6.69□□□□□ -1.34
SYNGAP1-223ENST00000637671 FAM19A3Q7Z5A8 133 aa6.69□□□□□ -1.34
SYNGAP1-223ENST00000637671 CDKN2A-AS1Q9UH64 79 aa6.69□□□□□ -1.34
SYNGAP1-223ENST00000637671 LOC389332A0A1B0GUA5 103 aa6.68□□□□□ -1.34
SYNGAP1-223ENST00000637671 A0A1B0GXF2 115 aa6.68□□□□□ -1.34
SYNGAP1-223ENST00000637671 KRTAP13-3Q3SY46 172 aa6.68□□□□□ -1.34
SYNGAP1-223ENST00000637671 PAPPA-AS1Q5QFB9 102 aa6.68□□□□□ -1.34
SYNGAP1-223ENST00000637671 FAM19A1Q7Z5A9 133 aa6.68□□□□□ -1.34
SYNGAP1-223ENST00000637671 MAP1LC3AQ9H492 121 aa6.68□□□□□ -1.34
SYNGAP1-223ENST00000637671 ORMDL2Q53FV1 153 aa6.67□□□□□ -1.34
SYNGAP1-223ENST00000637671 C3orf22Q8N5N4 141 aa6.67□□□□□ -1.34
SYNGAP1-223ENST00000637671 NAT8Q9UHE5 227 aa6.67□□□□□ -1.34
SYNGAP1-223ENST00000637671 LAMTOR2Q9Y2Q5 125 aa6.67□□□□□ -1.34
SYNGAP1-223ENST00000637671 COX7B2Q8TF08 81 aa6.66□□□□□ -1.34
SYNGAP1-223ENST00000637671 IGIPA6NJ69 53 aa6.65□□□□□ -1.34
SYNGAP1-223ENST00000637671 PRSS47A8MTI9 375 aa6.65□□□□□ -1.34
SYNGAP1-223ENST00000637671 RAB5BP61020 215 aa6.65□□□□□ -1.34
SYNGAP1-223ENST00000637671 ATP5L2Q7Z4Y8 100 aa6.65□□□□□ -1.34
SYNGAP1-223ENST00000637671 Q8N8P6 123 aa6.65□□□□□ -1.34
SYNGAP1-223ENST00000637671 GNB1LQ9BYB4 327 aa6.65□□□□□ -1.34
SYNGAP1-223ENST00000637671 TMEM126AQ9H061 195 aa6.65□□□□□ -1.34
SYNGAP1-223ENST00000637671 A0A1B0GVG6 124 aa6.64□□□□□ -1.35
SYNGAP1-223ENST00000637671 SMIM1B2RUZ4 78 aa6.64□□□□□ -1.35
SYNGAP1-223ENST00000637671 SCO1O75880 301 aa6.64□□□□□ -1.35
SYNGAP1-223ENST00000637671 PDZD11Q5EBL8 140 aa6.64□□□□□ -1.35
SYNGAP1-223ENST00000637671 CBLN2Q8IUK8 224 aa6.64□□□□□ -1.35
SYNGAP1-223ENST00000637671 PLEKHB2Q96CS7 222 aa6.64□□□□□ -1.35
SYNGAP1-223ENST00000637671 NDUFA12Q9UI09 145 aa6.64□□□□□ -1.35
SYNGAP1-223ENST00000637671 TMEM238C9JI98 176 aa6.63□□□□□ -1.35
SYNGAP1-223ENST00000637671 K7EMI3 77 aa6.63□□□□□ -1.35
SYNGAP1-223ENST00000637671 G0S2P27469 103 aa6.63□□□□□ -1.35
SYNGAP1-223ENST00000637671 KRTAP4-1Q9BYQ7 146 aa6.63□□□□□ -1.35
SYNGAP1-223ENST00000637671 ATP5LO75964 103 aa6.62□□□□□ -1.35
SYNGAP1-223ENST00000637671 HIGD2AQ9BW72 106 aa6.62□□□□□ -1.35
SYNGAP1-223ENST00000637671 ZNF706Q9Y5V0 76 aaPredicted RBP6.62□□□□□ -1.35
SYNGAP1-223ENST00000637671 M0R378 163 aa6.61□□□□□ -1.35
SYNGAP1-223ENST00000637671 DAND5Q8N907 189 aa6.61□□□□□ -1.35
SYNGAP1-223ENST00000637671 Q8NBF4 154 aa6.61□□□□□ -1.35
SYNGAP1-223ENST00000637671 TIMM17AQ99595 171 aa6.61□□□□□ -1.35
SYNGAP1-223ENST00000637671 SPINK1P00995 79 aa6.6□□□□□ -1.35
SYNGAP1-223ENST00000637671 RPL24P83731 157 aaKnown RBP6.6□□□□□ -1.35
SYNGAP1-223ENST00000637671 SPRR4Q96PI1 79 aa6.6□□□□□ -1.35
SYNGAP1-223ENST00000637671 NXT2Q9NPJ8 142 aaKnown RBP6.6□□□□□ -1.35
SYNGAP1-223ENST00000637671 TINCRA0A1B0GVN0 87 aa6.59□□□□□ -1.35
SYNGAP1-223ENST00000637671 CFC1BP0CG36 223 aa6.59□□□□□ -1.35
SYNGAP1-223ENST00000637671 VPREB1P12018 145 aa6.59□□□□□ -1.35
SYNGAP1-223ENST00000637671 PFN2P35080 140 aa6.59□□□□□ -1.35
SYNGAP1-223ENST00000637671 FAM19A2Q8N3H0 131 aa6.59□□□□□ -1.35
SYNGAP1-223ENST00000637671 IGLV5-45A0A087WSX0 123 aa6.58□□□□□ -1.36
SYNGAP1-223ENST00000637671 SPINK8P0C7L1 97 aa6.58□□□□□ -1.36
SYNGAP1-223ENST00000637671 PEA15Q15121 130 aa6.58□□□□□ -1.36
SYNGAP1-223ENST00000637671 TOMM6Q96B49 74 aa6.58□□□□□ -1.36
SYNGAP1-223ENST00000637671 C9JQL5 133 aa6.57□□□□□ -1.36
SYNGAP1-223ENST00000637671 H3BRM9 83 aa6.57□□□□□ -1.36
SYNGAP1-223ENST00000637671 ERASQ7Z444 233 aa6.57□□□□□ -1.36
SYNGAP1-223ENST00000637671 SCGB3A1Q96QR1 104 aa6.57□□□□□ -1.36
SYNGAP1-223ENST00000637671 SND1-IT1Q9HBX3 110 aa6.57□□□□□ -1.36
SYNGAP1-223ENST00000637671 RAB14P61106 215 aa6.56□□□□□ -1.36
SYNGAP1-223ENST00000637671 AKAP14Q86UN6 197 aa6.56□□□□□ -1.36
SYNGAP1-223ENST00000637671 MRPL18Q9H0U6 180 aaKnown RBP6.56□□□□□ -1.36
SYNGAP1-223ENST00000637671 COX17Q14061 63 aa6.54□□□□□ -1.36
SYNGAP1-223ENST00000637671 XP32Q5T750 250 aa6.54□□□□□ -1.36
SYNGAP1-223ENST00000637671 LCE2CQ5TA81 110 aa6.54□□□□□ -1.36
SYNGAP1-223ENST00000637671 CST9LQ9H4G1 147 aa6.54□□□□□ -1.36
SYNGAP1-223ENST00000637671 ERG28Q9UKR5 140 aa6.54□□□□□ -1.36
SYNGAP1-223ENST00000637671 LINC01549A6NIU2 74 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms