RNA–Protein interactions for RNA: ENST00000637156.1

CLN8-213, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,897 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-213ENST00000637156 APOMO95445 188 aa13.99□□□□□ -0.17
CLN8-213ENST00000637156 KMT2AQ03164 3969 aa13.99□□□□□ -0.17
CLN8-213ENST00000637156 CEND1Q8N111 149 aa13.98□□□□□ -0.17
CLN8-213ENST00000637156 PRSS2P07478 247 aa13.97□□□□□ -0.17
CLN8-213ENST00000637156 C2orf82Q6UX34 121 aa13.97□□□□□ -0.17
CLN8-213ENST00000637156 LINC00526Q96FQ7 95 aa13.97□□□□□ -0.17
CLN8-213ENST00000637156 SMIM13P0DJ93 91 aa13.96□□□□□ -0.17
CLN8-213ENST00000637156 GCSHP23434 173 aa13.96□□□□□ -0.17
CLN8-213ENST00000637156 RMI2Q96E14 147 aa13.96□□□□□ -0.17
CLN8-213ENST00000637156 C6orf223Q8N319 242 aa13.95□□□□□ -0.18
CLN8-213ENST00000637156 C15orf56Q8N910 161 aa13.95□□□□□ -0.18
CLN8-213ENST00000637156 ADAMTSL4-AS1Q5T5F5 129 aa13.95□□□□□ -0.18
CLN8-213ENST00000637156 LITAFQ99732 161 aa13.95□□□□□ -0.18
CLN8-213ENST00000637156 SPAG11BQ08648 103 aa13.94□□□□□ -0.18
CLN8-213ENST00000637156 FXYD2P54710 66 aa13.93□□□□□ -0.18
CLN8-213ENST00000637156 HERV-K104P63124 156 aa13.93□□□□□ -0.18
CLN8-213ENST00000637156 TTC32Q5I0X7 151 aa13.93□□□□□ -0.18
CLN8-213ENST00000637156 M0R2N4 97 aa13.93□□□□□ -0.18
CLN8-213ENST00000637156 CKS1BP61024 79 aa13.93□□□□□ -0.18
CLN8-213ENST00000637156 CFAP161Q6P656 301 aa13.93□□□□□ -0.18
CLN8-213ENST00000637156 GTF2H5Q6ZYL4 71 aa13.93□□□□□ -0.18
CLN8-213ENST00000637156 HIGD2BQ4VC39 106 aa13.92□□□□□ -0.18
CLN8-213ENST00000637156 NTN5Q8WTR8 489 aaPredicted RBP13.92□□□□□ -0.18
CLN8-213ENST00000637156 HIST1H4GQ99525 98 aa13.92□□□□□ -0.18
CLN8-213ENST00000637156 LY6G6CO95867 125 aa13.91□□□□□ -0.18
CLN8-213ENST00000637156 SRSF9Q13242 221 aaKnown RBP eCLIP13.91□□□□□ -0.18
CLN8-213ENST00000637156 SPANXB1Q9NS25 103 aaPredicted RBP13.91□□□□□ -0.18
CLN8-213ENST00000637156 A0A0U1RRA0 63 aa13.9□□□□□ -0.18
CLN8-213ENST00000637156 C10orf25Q5T742 122 aa13.9□□□□□ -0.18
CLN8-213ENST00000637156 UNQ6190/PRO20217Q6UXQ8 127 aa13.9□□□□□ -0.18
CLN8-213ENST00000637156 ZNF561-AS1K7EIQ3 104 aa13.89□□□□□ -0.19
CLN8-213ENST00000637156 CXCL5P42830 114 aa13.89□□□□□ -0.19
CLN8-213ENST00000637156 SFTA2Q6UW10 78 aa13.89□□□□□ -0.19
CLN8-213ENST00000637156 LINC00476Q8WZB0 136 aa13.89□□□□□ -0.19
CLN8-213ENST00000637156 GAGE10A6NGK3 116 aa13.89□□□□□ -0.19
CLN8-213ENST00000637156 H3BUT2 72 aa13.89□□□□□ -0.19
CLN8-213ENST00000637156 TIMM17BO60830 172 aa13.89□□□□□ -0.19
CLN8-213ENST00000637156 DNAH2Q9P225 4427 aa13.88□□□□□ -0.19
CLN8-213ENST00000637156 TMEM238C9JI98 176 aa13.88□□□□□ -0.19
CLN8-213ENST00000637156 CIRBPQ14011 172 aaKnown RBP13.88□□□□□ -0.19
CLN8-213ENST00000637156 MEIG1Q5JSS6 88 aa13.88□□□□□ -0.19
CLN8-213ENST00000637156 Q6ZR54 194 aa13.88□□□□□ -0.19
CLN8-213ENST00000637156 GVQW2A0A096LPI5 108 aaPredicted RBP13.87□□□□□ -0.19
CLN8-213ENST00000637156 A0A1W2PPM0 123 aa13.87□□□□□ -0.19
CLN8-213ENST00000637156 USP17L23D6RBM5 183 aa13.87□□□□□ -0.19
CLN8-213ENST00000637156 DAND5Q8N907 189 aa13.87□□□□□ -0.19
CLN8-213ENST00000637156 A0A1B0GWB2 263 aa13.87□□□□□ -0.19
CLN8-213ENST00000637156 K7EP34 96 aa13.86□□□□□ -0.19
CLN8-213ENST00000637156 LECT2O14960 151 aa13.86□□□□□ -0.19
CLN8-213ENST00000637156 C9orf116Q5BN46 136 aaPredicted RBP13.86□□□□□ -0.19
CLN8-213ENST00000637156 NHP2Q9NX24 153 aaKnown RBP13.86□□□□□ -0.19
CLN8-213ENST00000637156 TMEM238LA0A1B0GVL6 79 aa13.85□□□□□ -0.19
CLN8-213ENST00000637156 A6NJY4 79 aa13.85□□□□□ -0.19
CLN8-213ENST00000637156 Q6ZRN7 208 aaPredicted RBP13.85□□□□□ -0.19
CLN8-213ENST00000637156 RAB37Q96AX2 223 aa13.85□□□□□ -0.19
CLN8-213ENST00000637156 FABP2P12104 132 aa13.84□□□□□ -0.19
CLN8-213ENST00000637156 PFN2P35080 140 aa13.84□□□□□ -0.19
CLN8-213ENST00000637156 MUSTN1Q8IVN3 82 aa13.84□□□□□ -0.19
CLN8-213ENST00000637156 SPANXDQ9BXN6 97 aa13.84□□□□□ -0.19
CLN8-213ENST00000637156 SPANXCQ9NY87 97 aa13.84□□□□□ -0.19
CLN8-213ENST00000637156 ERG28Q9UKR5 140 aa13.84□□□□□ -0.19
CLN8-213ENST00000637156 PSCAO43653 123 aa13.84□□□□□ -0.19
CLN8-213ENST00000637156 EIF4EBP3O60516 100 aaPredicted RBP13.84□□□□□ -0.19
CLN8-213ENST00000637156 WFDC2Q14508 124 aa13.84□□□□□ -0.19
CLN8-213ENST00000637156 C2orf48Q96LS8 159 aa13.83□□□□□ -0.2
CLN8-213ENST00000637156 SLPIP03973 132 aa13.82□□□□□ -0.2
CLN8-213ENST00000637156 LINC00158P58513 81 aa13.82□□□□□ -0.2
CLN8-213ENST00000637156 CAMK2N2Q96S95 79 aa13.82□□□□□ -0.2
CLN8-213ENST00000637156 C6orf48Q9UBA6 75 aa13.82□□□□□ -0.2
CLN8-213ENST00000637156 NPC2P61916 151 aa13.81□□□□□ -0.2
CLN8-213ENST00000637156 Q6ZRU5 148 aa13.81□□□□□ -0.2
CLN8-213ENST00000637156 MIR7-3HGQ8N6C7 128 aa13.8□□□□□ -0.2
CLN8-213ENST00000637156 SPCS1Q9Y6A9 102 aa13.8□□□□□ -0.2
CLN8-213ENST00000637156 ALMS1Q8TCU4 4167 aa13.79□□□□□ -0.2
CLN8-213ENST00000637156 COX17Q14061 63 aa13.79□□□□□ -0.2
CLN8-213ENST00000637156 SOSTDC1Q6X4U4 206 aa13.78□□□□□ -0.2
CLN8-213ENST00000637156 LINC00308Q8TCZ7 52 aa13.78□□□□□ -0.2
CLN8-213ENST00000637156 HYDINQ4G0P3 5121 aa13.78□□□□□ -0.2
CLN8-213ENST00000637156 LRCOL1A6NCL2 159 aa13.78□□□□□ -0.2
CLN8-213ENST00000637156 F8WDY8 70 aa13.78□□□□□ -0.2
CLN8-213ENST00000637156 K7ERJ3 54 aa13.78□□□□□ -0.2
CLN8-213ENST00000637156 TRBV30A0A0K0K1B3 111 aa13.77□□□□□ -0.21
CLN8-213ENST00000637156 SYCNQ0VAF6 134 aa13.77□□□□□ -0.21
CLN8-213ENST00000637156 IFITM1P13164 125 aa13.76□□□□□ -0.21
CLN8-213ENST00000637156 A4D1N5 150 aa13.75□□□□□ -0.21
CLN8-213ENST00000637156 NAA38Q9BRA0 125 aaKnown RBP13.75□□□□□ -0.21
CLN8-213ENST00000637156 DNAH6Q9C0G6 4158 aa13.75□□□□□ -0.21
CLN8-213ENST00000637156 RPL24P83731 157 aaKnown RBP13.74□□□□□ -0.21
CLN8-213ENST00000637156 SACSQ9NZJ4 4579 aa13.73□□□□□ -0.21
CLN8-213ENST00000637156 C1orf134Q5TEV5 83 aa13.72□□□□□ -0.21
CLN8-213ENST00000637156 CFC1BP0CG36 223 aa13.71□□□□□ -0.21
CLN8-213ENST00000637156 CFC1P0CG37 223 aa13.71□□□□□ -0.21
CLN8-213ENST00000637156 CARD19Q96LW7 228 aa13.71□□□□□ -0.21
CLN8-213ENST00000637156 SND1-IT1Q9HBX3 110 aa13.7□□□□□ -0.22
CLN8-213ENST00000637156 OCIAD2Q56VL3 154 aa13.7□□□□□ -0.22
CLN8-213ENST00000637156 PPDPFQ9H3Y8 114 aa13.7□□□□□ -0.22
CLN8-213ENST00000637156 LOC107984156A0A0G2JMH3 177 aa13.69□□□□□ -0.22
CLN8-213ENST00000637156 RNF151Q2KHN1 245 aa13.69□□□□□ -0.22
CLN8-213ENST00000637156 ARL17AQ8IVW1 177 aa13.69□□□□□ -0.22
CLN8-213ENST00000637156 DNAH17Q9UFH2 4485 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms