RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 MGPP08493 103 aa1.75□□□□□ -2.13
VIM-210ENST00000637053 PLNP26678 52 aa1.75□□□□□ -2.13
VIM-210ENST00000637053 SPATA8Q6RVD6 105 aa1.75□□□□□ -2.13
VIM-210ENST00000637053 ZCCHC13Q8WW36 166 aaKnown RBP1.75□□□□□ -2.13
VIM-210ENST00000637053 SPRR4Q96PI1 79 aa1.75□□□□□ -2.13
VIM-210ENST00000637053 UBL5Q9BZL1 73 aa1.75□□□□□ -2.13
VIM-210ENST00000637053 ABCA4P78363 2273 aa1.75□□□□□ -2.13
VIM-210ENST00000637053 CACNA1DQ01668 2161 aa1.75□□□□□ -2.13
VIM-210ENST00000637053 NCOA6Q14686 2063 aaPredicted RBP1.75□□□□□ -2.13
VIM-210ENST00000637053 LY75O60449 1722 aa1.74□□□□□ -2.13
VIM-210ENST00000637053 ZFHX2Q9C0A1 2572 aaPredicted RBP1.74□□□□□ -2.13
VIM-210ENST00000637053 RP1P56715 2156 aa1.74□□□□□ -2.13
VIM-210ENST00000637053 ARFGEF3Q5TH69 2177 aa1.74□□□□□ -2.13
VIM-210ENST00000637053 A0A087WTM6 91 aa1.74□□□□□ -2.13
VIM-210ENST00000637053 TRBV6-1A0A0K0K1D8 114 aa1.74□□□□□ -2.13
VIM-210ENST00000637053 TRBV6-4A0A1B0GX49 114 aa1.74□□□□□ -2.13
VIM-210ENST00000637053 JMJD7-PLA2G4BH0Y9G9 81 aa1.74□□□□□ -2.13
VIM-210ENST00000637053 RNASE3P12724 160 aaKnown RBP1.74□□□□□ -2.13
VIM-210ENST00000637053 NDPQ00604 133 aa1.74□□□□□ -2.13
VIM-210ENST00000637053 LINC00322Q6ZN03 302 aaPredicted RBP1.74□□□□□ -2.13
VIM-210ENST00000637053 WFDC9Q8NEX5 89 aa1.74□□□□□ -2.13
VIM-210ENST00000637053 BCORQ6W2J9 1755 aa1.74□□□□□ -2.13
VIM-210ENST00000637053 DEPDC5O75140 1603 aa1.73□□□□□ -2.13
VIM-210ENST00000637053 UNC13CQ8NB66 2214 aa1.73□□□□□ -2.13
VIM-210ENST00000637053 LINC01546A6NGU7 62 aa1.73□□□□□ -2.13
VIM-210ENST00000637053 SPINK4O60575 86 aa1.73□□□□□ -2.13
VIM-210ENST00000637053 COX6B1P14854 86 aa1.73□□□□□ -2.13
VIM-210ENST00000637053 LY6EQ16553 131 aa1.73□□□□□ -2.13
VIM-210ENST00000637053 C10orf113Q5VZT2 155 aa1.73□□□□□ -2.13
VIM-210ENST00000637053 DEFB132Q7Z7B7 95 aa1.73□□□□□ -2.13
VIM-210ENST00000637053 WFDC10AQ9H1F0 79 aa1.73□□□□□ -2.13
VIM-210ENST00000637053 TMEM14CQ9P0S9 112 aa1.73□□□□□ -2.13
VIM-210ENST00000637053 CCL26Q9Y258 94 aa1.73□□□□□ -2.13
VIM-210ENST00000637053 DDX60LQ5H9U9 1706 aaKnown RBP1.73□□□□□ -2.13
VIM-210ENST00000637053 ARHGAP32A7KAX9 2087 aa1.73□□□□□ -2.13
VIM-210ENST00000637053 SDK1Q7Z5N4 2213 aa1.72□□□□□ -2.13
VIM-210ENST00000637053 SAMD9LQ8IVG5 1584 aa1.72□□□□□ -2.13
VIM-210ENST00000637053 COL4A5P29400 1685 aa1.72□□□□□ -2.13
VIM-210ENST00000637053 IGKV2-40A0A087WW87 121 aaPredicted RBP1.72□□□□□ -2.13
VIM-210ENST00000637053 NBDYA0A0U1RRE5 68 aa1.72□□□□□ -2.13
VIM-210ENST00000637053 IGIPA6NJ69 53 aa1.72□□□□□ -2.13
VIM-210ENST00000637053 I3L3M4 83 aa1.72□□□□□ -2.13
VIM-210ENST00000637053 M0R1W7 72 aa1.72□□□□□ -2.13
VIM-210ENST00000637053 IGKV2D-40P01614 121 aaPredicted RBP1.72□□□□□ -2.13
VIM-210ENST00000637053 HRES1P13985 223 aa1.72□□□□□ -2.13
VIM-210ENST00000637053 FXYD6P3P58550 94 aa1.72□□□□□ -2.13
VIM-210ENST00000637053 KLK9Q9UKQ9 250 aa1.72□□□□□ -2.13
VIM-210ENST00000637053 NRAPQ86VF7 1730 aa1.71□□□□□ -2.13
VIM-210ENST00000637053 E9PCH4 1651 aa1.71□□□□□ -2.14
VIM-210ENST00000637053 TRAV40A0A0B4J280 105 aa1.71□□□□□ -2.14
VIM-210ENST00000637053 TRGV4A0A0C4DH28 118 aa1.71□□□□□ -2.14
VIM-210ENST00000637053 A0A0G2JQZ4 141 aa1.71□□□□□ -2.14
VIM-210ENST00000637053 A0A1W2PNN7 141 aa1.71□□□□□ -2.14
VIM-210ENST00000637053 TPRXLQ17RH7 258 aa1.71□□□□□ -2.14
VIM-210ENST00000637053 LCE1CQ5T751 118 aa1.71□□□□□ -2.14
VIM-210ENST00000637053 LCE1BQ5T7P3 118 aa1.71□□□□□ -2.14
VIM-210ENST00000637053 GAFA1Q96PS6 74 aa1.71□□□□□ -2.14
VIM-210ENST00000637053 GFRA4Q9GZZ7 299 aa1.71□□□□□ -2.14
VIM-210ENST00000637053 TIMM8BQ9Y5J9 83 aaPredicted RBP1.71□□□□□ -2.14
VIM-210ENST00000637053 COL27A1Q8IZC6 1860 aaPredicted RBP1.71□□□□□ -2.14
VIM-210ENST00000637053 DLEC1Q9Y238 1755 aa1.7□□□□□ -2.14
VIM-210ENST00000637053 IGLV3-19P01714 112 aa1.7□□□□□ -2.14
VIM-210ENST00000637053 ARL14EPLP0DKL9 152 aa1.7□□□□□ -2.14
VIM-210ENST00000637053 IL9P15248 144 aa1.7□□□□□ -2.14
VIM-210ENST00000637053 RPL37AP61513 92 aaKnown RBP1.7□□□□□ -2.14
VIM-210ENST00000637053 FXYD3Q14802 87 aa1.7□□□□□ -2.14
VIM-210ENST00000637053 DEFB112Q30KQ8 113 aa1.7□□□□□ -2.14
VIM-210ENST00000637053 PRR14LQ5THK1 2151 aa1.7□□□□□ -2.14
VIM-210ENST00000637053 DDX60Q8IY21 1712 aaKnown RBP1.7□□□□□ -2.14
VIM-210ENST00000637053 SPACA4Q8TDM5 124 aa1.7□□□□□ -2.14
VIM-210ENST00000637053 DOCK10Q96BY6 2186 aa1.7□□□□□ -2.14
VIM-210ENST00000637053 ZNF625Q96I27 306 aaPredicted RBP1.7□□□□□ -2.14
VIM-210ENST00000637053 LINC00472Q9H8W2 130 aa1.7□□□□□ -2.14
VIM-210ENST00000637053 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.69□□□□□ -2.14
VIM-210ENST00000637053 LINC00959A0A1B0GUT2 108 aa1.69□□□□□ -2.14
VIM-210ENST00000637053 IGKV2-29A2NJV5 120 aaPredicted RBP1.69□□□□□ -2.14
VIM-210ENST00000637053 COX17Q14061 63 aa1.69□□□□□ -2.14
VIM-210ENST00000637053 C14orf177Q52M58 125 aa1.69□□□□□ -2.14
VIM-210ENST00000637053 KRTAP7-1Q8IUC3 87 aa1.69□□□□□ -2.14
VIM-210ENST00000637053 C5orf56Q8N8D9 126 aa1.69□□□□□ -2.14
VIM-210ENST00000637053 Q96NJ1 140 aa1.69□□□□□ -2.14
VIM-210ENST00000637053 DUOX1Q9NRD9 1551 aa1.68□□□□□ -2.14
VIM-210ENST00000637053 TRGV1A0A0A0MS02 117 aa1.68□□□□□ -2.14
VIM-210ENST00000637053 NDUFA4O00483 81 aa1.68□□□□□ -2.14
VIM-210ENST00000637053 IGKV4-1P06312 121 aa1.68□□□□□ -2.14
VIM-210ENST00000637053 KRTAP10-1P60331 282 aa1.68□□□□□ -2.14
VIM-210ENST00000637053 DEFB134Q4QY38 66 aa1.68□□□□□ -2.14
VIM-210ENST00000637053 SPINK14Q6IE38 97 aa1.68□□□□□ -2.14
VIM-210ENST00000637053 LINC00304Q8N9R0 145 aa1.68□□□□□ -2.14
VIM-210ENST00000637053 NDUFA3O95167 84 aa1.67□□□□□ -2.14
VIM-210ENST00000637053 IGKV3-15P01624 115 aa1.67□□□□□ -2.14
VIM-210ENST00000637053 FXYD4P59646 89 aa1.67□□□□□ -2.14
VIM-210ENST00000637053 KRTAP12-2P59991 146 aa1.67□□□□□ -2.14
VIM-210ENST00000637053 DEFB114Q30KQ6 69 aa1.67□□□□□ -2.14
VIM-210ENST00000637053 C10orf55Q5SWW7 151 aa1.67□□□□□ -2.14
VIM-210ENST00000637053 COA5Q86WW8 74 aa1.67□□□□□ -2.14
VIM-210ENST00000637053 MAPK1IP1LQ8NDC0 245 aa1.67□□□□□ -2.14
VIM-210ENST00000637053 TRGV2A0A075B6R0 118 aa1.66□□□□□ -2.14
VIM-210ENST00000637053 PIN1P1O15428 100 aa1.66□□□□□ -2.14
VIM-210ENST00000637053 ANKRD17O75179 2603 aaKnown RBP1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms