RNA–Protein interactions for RNA: ENST00000636681.1

CLN5-213, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 5

Gene CLN5, Length 1,791 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-213ENST00000636681 C9orf116Q5BN46 136 aaPredicted RBP6.95□□□□□ -1.3
CLN5-213ENST00000636681 UNQ6190/PRO20217Q6UXQ8 127 aa6.95□□□□□ -1.3
CLN5-213ENST00000636681 J3QQQ9 107 aa6.95□□□□□ -1.3
CLN5-213ENST00000636681 LEPROTO15243 131 aa6.95□□□□□ -1.3
CLN5-213ENST00000636681 SPATA45Q537H7 98 aa6.95□□□□□ -1.3
CLN5-213ENST00000636681 GVQW2A0A096LPI5 108 aaPredicted RBP6.94□□□□□ -1.3
CLN5-213ENST00000636681 APOMO95445 188 aa6.94□□□□□ -1.3
CLN5-213ENST00000636681 C6orf226Q5I0X4 101 aa6.94□□□□□ -1.3
CLN5-213ENST00000636681 Q6ZRU5 148 aa6.94□□□□□ -1.3
CLN5-213ENST00000636681 LINC01561Q8N1V8 128 aa6.94□□□□□ -1.3
CLN5-213ENST00000636681 VAMP8Q9BV40 100 aa6.94□□□□□ -1.3
CLN5-213ENST00000636681 ZNF561-AS1K7EIQ3 104 aa6.93□□□□□ -1.3
CLN5-213ENST00000636681 KRTAP10-2P60368 255 aa6.93□□□□□ -1.3
CLN5-213ENST00000636681 HERVK_113P61574 105 aa6.93□□□□□ -1.3
CLN5-213ENST00000636681 Q8IZM0 81 aa6.93□□□□□ -1.3
CLN5-213ENST00000636681 Q8N814 137 aa6.93□□□□□ -1.3
CLN5-213ENST00000636681 PLEKHB2Q96CS7 222 aa6.93□□□□□ -1.3
CLN5-213ENST00000636681 C14orf144Q96I85 54 aa6.93□□□□□ -1.3
CLN5-213ENST00000636681 C12orf57Q99622 126 aa6.92□□□□□ -1.3
CLN5-213ENST00000636681 A0A0U1RRA0 63 aa6.92□□□□□ -1.3
CLN5-213ENST00000636681 PRSS2P07478 247 aa6.92□□□□□ -1.3
CLN5-213ENST00000636681 SMIM6P0DI80 62 aa6.92□□□□□ -1.3
CLN5-213ENST00000636681 CFAP161Q6P656 301 aa6.92□□□□□ -1.3
CLN5-213ENST00000636681 PRO1933Q9H354 126 aa6.92□□□□□ -1.3
CLN5-213ENST00000636681 C6orf48Q9UBA6 75 aa6.92□□□□□ -1.3
CLN5-213ENST00000636681 NDUFA12Q9UI09 145 aa6.92□□□□□ -1.3
CLN5-213ENST00000636681 HSBP1L1C9JCN9 74 aa6.91□□□□□ -1.3
CLN5-213ENST00000636681 CAMK2N2Q96S95 79 aa6.91□□□□□ -1.3
CLN5-213ENST00000636681 LGALS3P17931 250 aaKnown RBP6.9□□□□□ -1.3
CLN5-213ENST00000636681 LINC00518Q8N0U6 118 aa6.9□□□□□ -1.3
CLN5-213ENST00000636681 ZNF815PA8K554 130 aa6.9□□□□□ -1.31
CLN5-213ENST00000636681 CKS1BP61024 79 aa6.9□□□□□ -1.31
CLN5-213ENST00000636681 SYCNQ0VAF6 134 aa6.9□□□□□ -1.31
CLN5-213ENST00000636681 DYNC1H1Q14204 4646 aaKnown RBP6.89□□□□□ -1.31
CLN5-213ENST00000636681 NDUFA1O15239 70 aa6.89□□□□□ -1.31
CLN5-213ENST00000636681 C2orf48Q96LS8 159 aa6.89□□□□□ -1.31
CLN5-213ENST00000636681 PFN2P35080 140 aa6.88□□□□□ -1.31
CLN5-213ENST00000636681 DAND5Q8N907 189 aa6.88□□□□□ -1.31
CLN5-213ENST00000636681 CARD19Q96LW7 228 aa6.88□□□□□ -1.31
CLN5-213ENST00000636681 A0A0J9YXY3 114 aa6.87□□□□□ -1.31
CLN5-213ENST00000636681 LOC100996750A0A140TA64 210 aa6.87□□□□□ -1.31
CLN5-213ENST00000636681 SMIM13P0DJ93 91 aa6.87□□□□□ -1.31
CLN5-213ENST00000636681 COX8AP10176 69 aa6.87□□□□□ -1.31
CLN5-213ENST00000636681 KRTAP4-6Q9BYQ5 205 aa6.87□□□□□ -1.31
CLN5-213ENST00000636681 DNAH8Q96JB1 4490 aa6.87□□□□□ -1.31
CLN5-213ENST00000636681 EPPK1P58107 5090 aaKnown RBP6.87□□□□□ -1.31
CLN5-213ENST00000636681 MYMXA0A1B0GTQ4 84 aa6.87□□□□□ -1.31
CLN5-213ENST00000636681 A0A1B0GVY2 172 aa6.87□□□□□ -1.31
CLN5-213ENST00000636681 EIF4EBP3O60516 100 aaPredicted RBP6.87□□□□□ -1.31
CLN5-213ENST00000636681 CNBPP62633 177 aaKnown RBP6.87□□□□□ -1.31
CLN5-213ENST00000636681 S100A12P80511 92 aa6.87□□□□□ -1.31
CLN5-213ENST00000636681 ADAMTSL4-AS1Q5T5F5 129 aa6.87□□□□□ -1.31
CLN5-213ENST00000636681 BOD1L2Q8IYS8 172 aa6.87□□□□□ -1.31
CLN5-213ENST00000636681 C14orf177Q52M58 125 aa6.86□□□□□ -1.31
CLN5-213ENST00000636681 PANO1I0J062 215 aa6.85□□□□□ -1.31
CLN5-213ENST00000636681 CHTF8P0CG12 524 aa6.85□□□□□ -1.31
CLN5-213ENST00000636681 NPC2P61916 151 aa6.85□□□□□ -1.31
CLN5-213ENST00000636681 LITAFQ99732 161 aa6.85□□□□□ -1.31
CLN5-213ENST00000636681 ERG28Q9UKR5 140 aa6.85□□□□□ -1.31
CLN5-213ENST00000636681 LRP1BQ9NZR2 4599 aa6.85□□□□□ -1.31
CLN5-213ENST00000636681 IGLV5-52A0A0A0MRZ9 124 aa6.85□□□□□ -1.31
CLN5-213ENST00000636681 MEIG1Q5JSS6 88 aa6.85□□□□□ -1.31
CLN5-213ENST00000636681 Q6ZRP5 223 aa6.85□□□□□ -1.31
CLN5-213ENST00000636681 C2orf91Q6ZV80 131 aa6.85□□□□□ -1.31
CLN5-213ENST00000636681 C9orf163Q8N9P6 203 aa6.85□□□□□ -1.31
CLN5-213ENST00000636681 CXCL5P42830 114 aa6.84□□□□□ -1.31
CLN5-213ENST00000636681 GAGE2EQ4V326 116 aa6.84□□□□□ -1.31
CLN5-213ENST00000636681 SLC25A34Q6PIV7 304 aa6.84□□□□□ -1.31
CLN5-213ENST00000636681 LINC00336Q6ZUF6 198 aa6.84□□□□□ -1.31
CLN5-213ENST00000636681 XAGE1AQ9HD64 81 aa6.84□□□□□ -1.31
CLN5-213ENST00000636681 GAGE2DQ9UEU5 116 aa6.84□□□□□ -1.31
CLN5-213ENST00000636681 A0A096LNI7 61 aa6.83□□□□□ -1.32
CLN5-213ENST00000636681 TRBV30A0A0K0K1B3 111 aa6.83□□□□□ -1.32
CLN5-213ENST00000636681 LINC00158P58513 81 aa6.83□□□□□ -1.32
CLN5-213ENST00000636681 RPL18AQ02543 176 aaKnown RBP6.83□□□□□ -1.32
CLN5-213ENST00000636681 SCGB1D4Q6XE38 83 aa6.83□□□□□ -1.32
CLN5-213ENST00000636681 IGKV2-24A0A0C4DH68 120 aa6.82□□□□□ -1.32
CLN5-213ENST00000636681 KRTAP10-1P60331 282 aa6.82□□□□□ -1.32
CLN5-213ENST00000636681 SOSTDC1Q6X4U4 206 aa6.82□□□□□ -1.32
CLN5-213ENST00000636681 SDIM1Q6ZPB5 146 aa6.82□□□□□ -1.32
CLN5-213ENST00000636681 MIR7-3HGQ8N6C7 128 aa6.82□□□□□ -1.32
CLN5-213ENST00000636681 Q8NDZ9 215 aa6.82□□□□□ -1.32
CLN5-213ENST00000636681 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.82□□□□□ -1.32
CLN5-213ENST00000636681 HERV-K104P63124 156 aa6.82□□□□□ -1.32
CLN5-213ENST00000636681 HAMPP81172 84 aa6.82□□□□□ -1.32
CLN5-213ENST00000636681 GAGE2BQ13066 116 aa6.82□□□□□ -1.32
CLN5-213ENST00000636681 FAM30AQ9NZY2 134 aa6.82□□□□□ -1.32
CLN5-213ENST00000636681 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.82□□□□□ -1.32
CLN5-213ENST00000636681 FAM168BA1KXE4 195 aa6.81□□□□□ -1.32
CLN5-213ENST00000636681 C9orf129Q5T035 196 aaKnown RBP6.81□□□□□ -1.32
CLN5-213ENST00000636681 NDUFC2-KCTD14E9PQ53 114 aa6.8□□□□□ -1.32
CLN5-213ENST00000636681 DLEU1O43261 78 aa6.8□□□□□ -1.32
CLN5-213ENST00000636681 RNF151Q2KHN1 245 aa6.8□□□□□ -1.32
CLN5-213ENST00000636681 SND1-IT1Q9HBX3 110 aa6.8□□□□□ -1.32
CLN5-213ENST00000636681 LOC107984640A0A0U1RRK4 108 aa6.8□□□□□ -1.32
CLN5-213ENST00000636681 F8WDY8 70 aa6.8□□□□□ -1.32
CLN5-213ENST00000636681 KRTAP7-1Q8IUC3 87 aa6.8□□□□□ -1.32
CLN5-213ENST00000636681 UQCR10Q9UDW1 63 aa6.8□□□□□ -1.32
CLN5-213ENST00000636681 APOBP04114 4563 aaKnown RBP6.79□□□□□ -1.32
CLN5-213ENST00000636681 MIEN1Q9BRT3 115 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms