RNA–Protein interactions for RNA: ENST00000636306.1

CHD2-223, Transcript of chromodomain helicase DNA binding protein 2, human

TSL 5

Gene CHD2, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD2-223	ENST00000636306	ERC2-IT1	O76042	136 aa		7.61	□□□□□ -1.19
CHD2-223	ENST00000636306	IGKV2D-28	P01615	120 aa		7.61	□□□□□ -1.19
CHD2-223	ENST00000636306	IGKV3-20	P01619	116 aa		7.61	□□□□□ -1.19
CHD2-223	ENST00000636306	DEFB131A	P59861	70 aa		7.61	□□□□□ -1.19
CHD2-223	ENST00000636306	COX6A2	Q02221	97 aa		7.61	□□□□□ -1.19
CHD2-223	ENST00000636306	SS18	Q15532	418 aa		7.61	□□□□□ -1.19
CHD2-223	ENST00000636306	LINC00242	Q5T6M2	205 aa		7.61	□□□□□ -1.19
CHD2-223	ENST00000636306	WFDC9	Q8NEX5	89 aa		7.61	□□□□□ -1.19
CHD2-223	ENST00000636306	LINC00467	Q9BRT7	94 aa		7.61	□□□□□ -1.19
CHD2-223	ENST00000636306	SND1-IT1	Q9HBX3	110 aa		7.61	□□□□□ -1.19
CHD2-223	ENST00000636306	RPL36A	P83881	106 aa	Known RBP	7.61	□□□□□ -1.19
CHD2-223	ENST00000636306	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	7.61	□□□□□ -1.19
CHD2-223	ENST00000636306	RPL36AL	Q969Q0	106 aa	Known RBP	7.61	□□□□□ -1.19
CHD2-223	ENST00000636306	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	7.6	□□□□□ -1.19
CHD2-223	ENST00000636306	DGAT2L7P	Q6IED9	249 aa		7.6	□□□□□ -1.19
CHD2-223	ENST00000636306	MAP6D1	Q9H9H5	199 aa		7.6	□□□□□ -1.19
CHD2-223	ENST00000636306	FBN2	P35556	2912 aa		7.59	□□□□□ -1.19
CHD2-223	ENST00000636306	IGHV3OR16-12	A0A075B7B8	117 aa		7.59	□□□□□ -1.19
CHD2-223	ENST00000636306	TMEM256-PLSCR3	K7ERE1	68 aa		7.59	□□□□□ -1.19
CHD2-223	ENST00000636306	INS	P01308	110 aa		7.59	□□□□□ -1.19
CHD2-223	ENST00000636306	KRTAP1-1	Q07627	177 aa		7.59	□□□□□ -1.19
CHD2-223	ENST00000636306	DEFB114	Q30KQ6	69 aa		7.59	□□□□□ -1.19
CHD2-223	ENST00000636306	LCE2D	Q5TA82	110 aa	Predicted RBP	7.59	□□□□□ -1.19
CHD2-223	ENST00000636306		Q6ZRU5	148 aa		7.59	□□□□□ -1.19
CHD2-223	ENST00000636306	C18orf65	Q6ZTR6	163 aa		7.59	□□□□□ -1.19
CHD2-223	ENST00000636306	UTP20	O75691	2785 aa	Known RBP	7.59	□□□□□ -1.19
CHD2-223	ENST00000636306	CCL24	O00175	119 aa		7.59	□□□□□ -1.2
CHD2-223	ENST00000636306	MIF	P14174	115 aa		7.59	□□□□□ -1.2
CHD2-223	ENST00000636306	SNURF	Q9Y675	71 aa		7.59	□□□□□ -1.2
CHD2-223	ENST00000636306	PTPN13	Q12923	2485 aa		7.58	□□□□□ -1.2
CHD2-223	ENST00000636306	LY6G6D	O95868	133 aa		7.58	□□□□□ -1.2
CHD2-223	ENST00000636306	ESM1	Q9NQ30	184 aa		7.58	□□□□□ -1.2
CHD2-223	ENST00000636306	USP9Y	O00507	2555 aa	Predicted RBP	7.58	□□□□□ -1.2
CHD2-223	ENST00000636306	CXCL6	P80162	114 aa		7.57	□□□□□ -1.2
CHD2-223	ENST00000636306	CD164	Q04900	197 aa		7.56	□□□□□ -1.2
CHD2-223	ENST00000636306	LOC110117498	A0A087WWA1	95 aa		7.56	□□□□□ -1.2
CHD2-223	ENST00000636306	TRAV10	A0A0B4J240	114 aa		7.56	□□□□□ -1.2
CHD2-223	ENST00000636306	TRBV7-4	A0A0J9YYF1	115 aa		7.56	□□□□□ -1.2
CHD2-223	ENST00000636306	STH	Q8IWL8	128 aa		7.56	□□□□□ -1.2
CHD2-223	ENST00000636306	C11orf72	Q8NBR9	251 aa		7.56	□□□□□ -1.2
CHD2-223	ENST00000636306	LINC01006	Q8NI28	216 aa		7.56	□□□□□ -1.2
CHD2-223	ENST00000636306	IGHV3-38	A0A0C4DH36	116 aa		7.55	□□□□□ -1.2
CHD2-223	ENST00000636306	SLPI	P03973	132 aa		7.55	□□□□□ -1.2
CHD2-223	ENST00000636306	CCL18	P55774	89 aa		7.55	□□□□□ -1.2
CHD2-223	ENST00000636306	ESRG	Q1W209	222 aa		7.55	□□□□□ -1.2
CHD2-223	ENST00000636306	POLQ	O75417	2590 aa		7.54	□□□□□ -1.2
CHD2-223	ENST00000636306		A0A1W2PRX2	142 aa		7.54	□□□□□ -1.2
CHD2-223	ENST00000636306	LINC01547	P58512	204 aa	Predicted RBP	7.54	□□□□□ -1.2
CHD2-223	ENST00000636306	IGHV3-53	P01767	116 aa		7.54	□□□□□ -1.2
CHD2-223	ENST00000636306	PDE6G	P18545	87 aa		7.54	□□□□□ -1.2
CHD2-223	ENST00000636306	COX7B2	Q8TF08	81 aa		7.54	□□□□□ -1.2
CHD2-223	ENST00000636306	CRYBG3	Q68DQ2	2970 aa		7.53	□□□□□ -1.2
CHD2-223	ENST00000636306	DOPEY2	Q9Y3R5	2298 aa		7.53	□□□□□ -1.2
CHD2-223	ENST00000636306	TRBV6-4	A0A1B0GX49	114 aa		7.53	□□□□□ -1.2
CHD2-223	ENST00000636306		Q8N814	137 aa		7.53	□□□□□ -1.2
CHD2-223	ENST00000636306	IL17D	Q8TAD2	202 aa		7.53	□□□□□ -1.2
CHD2-223	ENST00000636306	ABCA12	Q86UK0	2595 aa		7.52	□□□□□ -1.21
CHD2-223	ENST00000636306	PROK1	P58294	105 aa		7.52	□□□□□ -1.21
CHD2-223	ENST00000636306		Q6ZQT0	140 aa		7.52	□□□□□ -1.21
CHD2-223	ENST00000636306	CELSR2	Q9HCU4	2923 aa		7.52	□□□□□ -1.21
CHD2-223	ENST00000636306	IGHV3-73	A0A0B4J1V6	119 aa		7.51	□□□□□ -1.21
CHD2-223	ENST00000636306		H3BQ85	93 aa		7.51	□□□□□ -1.21
CHD2-223	ENST00000636306	LINC00158	P58513	81 aa		7.51	□□□□□ -1.21
CHD2-223	ENST00000636306	ODF3L2	Q3SX64	289 aa		7.51	□□□□□ -1.21
CHD2-223	ENST00000636306	MPLKIP	Q8TAP9	179 aa		7.51	□□□□□ -1.21
CHD2-223	ENST00000636306	APC	P25054	2843 aa		7.51	□□□□□ -1.21
CHD2-223	ENST00000636306	ITPR3	Q14573	2671 aa		7.51	□□□□□ -1.21
CHD2-223	ENST00000636306		K7EQD1	137 aa		7.51	□□□□□ -1.21
CHD2-223	ENST00000636306	FAM229B	Q4G0N7	80 aa		7.51	□□□□□ -1.21
CHD2-223	ENST00000636306	C11orf44	Q8N8P7	122 aa		7.51	□□□□□ -1.21
CHD2-223	ENST00000636306	TMEM254	Q8TBM7	123 aa		7.51	□□□□□ -1.21
CHD2-223	ENST00000636306	C11orf68	Q9H3H3	251 aa	Known RBP	7.51	□□□□□ -1.21
CHD2-223	ENST00000636306	HTN1	P15515	57 aa		7.5	□□□□□ -1.21
CHD2-223	ENST00000636306	FUS	P35637	526 aa	Known RBP eCLIP	7.5	□□□□□ -1.21
CHD2-223	ENST00000636306	NREP	Q16612	68 aa		7.5	□□□□□ -1.21
CHD2-223	ENST00000636306		Q6ZVQ6	151 aa		7.5	□□□□□ -1.21
CHD2-223	ENST00000636306	TEP1	Q99973	2627 aa	Known RBP	7.49	□□□□□ -1.21
CHD2-223	ENST00000636306		Q6ZSN1	163 aa		7.49	□□□□□ -1.21
CHD2-223	ENST00000636306	C6orf223	Q8N319	242 aa		7.49	□□□□□ -1.21
CHD2-223	ENST00000636306	HECTD1	Q9ULT8	2610 aa		7.49	□□□□□ -1.21
CHD2-223	ENST00000636306	PAX4	O43316	350 aa		7.48	□□□□□ -1.21
CHD2-223	ENST00000636306	IGLV1-51	P01701	117 aa		7.48	□□□□□ -1.21
CHD2-223	ENST00000636306		Q1T7F1	81 aa		7.48	□□□□□ -1.21
CHD2-223	ENST00000636306	CDC42SE2	Q9NRR3	84 aa		7.48	□□□□□ -1.21
CHD2-223	ENST00000636306	TENM4	Q6N022	2769 aa		7.48	□□□□□ -1.21
CHD2-223	ENST00000636306	CENPE	Q02224	2701 aa		7.48	□□□□□ -1.21
CHD2-223	ENST00000636306	ZNF561-AS1	K7EIQ3	104 aa		7.48	□□□□□ -1.21
CHD2-223	ENST00000636306	PRY	O14603	147 aa		7.48	□□□□□ -1.21
CHD2-223	ENST00000636306	HAMP	P81172	84 aa		7.48	□□□□□ -1.21
CHD2-223	ENST00000636306	C9orf66	Q5T8R8	295 aa		7.48	□□□□□ -1.21
CHD2-223	ENST00000636306	TM2D3	Q9BRN9	247 aa		7.48	□□□□□ -1.21
CHD2-223	ENST00000636306	CELSR1	Q9NYQ6	3014 aa		7.48	□□□□□ -1.21
CHD2-223	ENST00000636306		Q6ZTC4	211 aa		7.47	□□□□□ -1.21
CHD2-223	ENST00000636306		Q8N3U1	123 aa		7.47	□□□□□ -1.21
CHD2-223	ENST00000636306	CSMD1	Q96PZ7	3565 aa		7.46	□□□□□ -1.21
CHD2-223	ENST00000636306		Q6ZTI0	123 aa		7.46	□□□□□ -1.22
CHD2-223	ENST00000636306	C16orf74	Q96GX8	76 aa		7.46	□□□□□ -1.22
CHD2-223	ENST00000636306		Q9UF83	564 aa		7.46	□□□□□ -1.22
CHD2-223	ENST00000636306	TEX15	Q9BXT5	2789 aa		7.46	□□□□□ -1.22
CHD2-223	ENST00000636306	ZAN	Q9Y493	2812 aa		7.45	□□□□□ -1.22

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