RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 RNASE13Q5GAN3 156 aaKnown RBP10.44□□□□□ -0.74
CLN6-212ENST00000636020 ORMDL3Q8N138 153 aa10.44□□□□□ -0.74
CLN6-212ENST00000636020 LINC00304Q8N9R0 145 aa10.44□□□□□ -0.74
CLN6-212ENST00000636020 ORAOV1Q8WV07 137 aa10.44□□□□□ -0.74
CLN6-212ENST00000636020 ANAPC11Q9NYG5 84 aa10.44□□□□□ -0.74
CLN6-212ENST00000636020 TMA7Q9Y2S6 64 aaKnown RBP10.44□□□□□ -0.74
CLN6-212ENST00000636020 CKS2P33552 79 aa10.43□□□□□ -0.74
CLN6-212ENST00000636020 NRACQ8N912 160 aa10.43□□□□□ -0.74
CLN6-212ENST00000636020 C18orf32Q8TCD1 76 aa10.43□□□□□ -0.74
CLN6-212ENST00000636020 PRELID3AQ96N28 172 aa10.43□□□□□ -0.74
CLN6-212ENST00000636020 CSDC2Q9Y534 153 aaKnown RBP10.43□□□□□ -0.74
CLN6-212ENST00000636020 NPYP01303 97 aa10.42□□□□□ -0.74
CLN6-212ENST00000636020 C9orf129Q5T035 196 aaKnown RBP10.42□□□□□ -0.74
CLN6-212ENST00000636020 ST20Q9HBF5 79 aa10.41□□□□□ -0.74
CLN6-212ENST00000636020 LAMTOR2Q9Y2Q5 125 aa10.41□□□□□ -0.74
CLN6-212ENST00000636020 TNFRSF6BO95407 300 aa10.4□□□□□ -0.74
CLN6-212ENST00000636020 POLR2KP53803 58 aaKnown RBP10.4□□□□□ -0.74
CLN6-212ENST00000636020 UBE2D4Q9Y2X8 147 aa10.4□□□□□ -0.74
CLN6-212ENST00000636020 TRBV27A0A0K0K1C4 114 aa10.39□□□□□ -0.75
CLN6-212ENST00000636020 RPL28P46779 137 aaKnown RBP10.39□□□□□ -0.75
CLN6-212ENST00000636020 CTAG1AP78358 180 aa10.39□□□□□ -0.75
CLN6-212ENST00000636020 COA6Q5JTJ3 125 aaKnown RBP10.39□□□□□ -0.75
CLN6-212ENST00000636020 LCE2CQ5TA81 110 aa10.39□□□□□ -0.75
CLN6-212ENST00000636020 PRSS47A8MTI9 375 aa10.38□□□□□ -0.75
CLN6-212ENST00000636020 LINC00310P59036 64 aa10.38□□□□□ -0.75
CLN6-212ENST00000636020 LINC00242Q5T6M2 205 aa10.38□□□□□ -0.75
CLN6-212ENST00000636020 IGHV3OR16-9A0A0B4J2B5 98 aa10.37□□□□□ -0.75
CLN6-212ENST00000636020 NDUFA6P56556 154 aa10.37□□□□□ -0.75
CLN6-212ENST00000636020 URB1-AS1Q96HZ7 61 aa10.37□□□□□ -0.75
CLN6-212ENST00000636020 NDUFC2-KCTD14E9PQ53 114 aa10.36□□□□□ -0.75
CLN6-212ENST00000636020 PPP1R17O96001 155 aa10.36□□□□□ -0.75
CLN6-212ENST00000636020 Q6ZUT4 128 aa10.36□□□□□ -0.75
CLN6-212ENST00000636020 C20orf78Q9BR46 151 aa10.36□□□□□ -0.75
CLN6-212ENST00000636020 MAP1LC3AQ9H492 121 aa10.36□□□□□ -0.75
CLN6-212ENST00000636020 BCE1O60756 84 aa10.35□□□□□ -0.75
CLN6-212ENST00000636020 SUMO2P61956 95 aaKnown RBP10.35□□□□□ -0.75
CLN6-212ENST00000636020 RPL32P62910 135 aaKnown RBP10.35□□□□□ -0.75
CLN6-212ENST00000636020 SMAGPQ0VAQ4 97 aa10.35□□□□□ -0.75
CLN6-212ENST00000636020 LINC00337Q8N6G1 96 aa10.35□□□□□ -0.75
CLN6-212ENST00000636020 C22orf24Q9Y442 160 aa10.35□□□□□ -0.75
CLN6-212ENST00000636020 SERF1AO75920 110 aa10.34□□□□□ -0.75
CLN6-212ENST00000636020 S100A6P06703 90 aa10.34□□□□□ -0.75
CLN6-212ENST00000636020 KIAA0087Q14695 138 aa10.34□□□□□ -0.75
CLN6-212ENST00000636020 BAGE3Q86Y29 109 aa10.34□□□□□ -0.75
CLN6-212ENST00000636020 SMIM2Q9BVW6 85 aa10.34□□□□□ -0.75
CLN6-212ENST00000636020 TRBV30A0A0K0K1B3 111 aa10.33□□□□□ -0.76
CLN6-212ENST00000636020 LOC389332A0A1B0GUA5 103 aa10.33□□□□□ -0.76
CLN6-212ENST00000636020 LINC01546A6NGU7 62 aa10.33□□□□□ -0.76
CLN6-212ENST00000636020 C5orf52A6NGY3 159 aa10.33□□□□□ -0.76
CLN6-212ENST00000636020 IFI27P40305 119 aaPredicted RBP10.33□□□□□ -0.76
CLN6-212ENST00000636020 FAM229BQ4G0N7 80 aa10.33□□□□□ -0.76
CLN6-212ENST00000636020 LBHQ53QV2 105 aaPredicted RBP10.33□□□□□ -0.76
CLN6-212ENST00000636020 Q8N8P6 123 aa10.33□□□□□ -0.76
CLN6-212ENST00000636020 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.32□□□□□ -0.76
CLN6-212ENST00000636020 SEC61BP60468 96 aaKnown RBP10.32□□□□□ -0.76
CLN6-212ENST00000636020 SNRPEP62304 92 aaKnown RBP10.32□□□□□ -0.76
CLN6-212ENST00000636020 KRTAP13-3Q3SY46 172 aa10.32□□□□□ -0.76
CLN6-212ENST00000636020 NXT2Q9NPJ8 142 aaKnown RBP10.32□□□□□ -0.76
CLN6-212ENST00000636020 LINC00614P0C842 121 aa10.31□□□□□ -0.76
CLN6-212ENST00000636020 FCER1GP30273 86 aa10.31□□□□□ -0.76
CLN6-212ENST00000636020 CHCHD1Q96BP2 118 aaKnown RBP10.31□□□□□ -0.76
CLN6-212ENST00000636020 TIMM21Q9BVV7 248 aa10.31□□□□□ -0.76
CLN6-212ENST00000636020 VCYO14598 125 aa10.3□□□□□ -0.76
CLN6-212ENST00000636020 CFC1BP0CG36 223 aa10.3□□□□□ -0.76
CLN6-212ENST00000636020 MT1HP80294 61 aa10.3□□□□□ -0.76
CLN6-212ENST00000636020 FP248Q71RG6 208 aaPredicted RBP10.3□□□□□ -0.76
CLN6-212ENST00000636020 FA2HQ7L5A8 372 aa10.3□□□□□ -0.76
CLN6-212ENST00000636020 HIST3H2BBQ8N257 126 aa10.3□□□□□ -0.76
CLN6-212ENST00000636020 IGKV2D-26A0A0A0MRZ7 120 aa10.29□□□□□ -0.76
CLN6-212ENST00000636020 C2orf82Q6UX34 121 aa10.29□□□□□ -0.76
CLN6-212ENST00000636020 FAM104AQ969W3 186 aa10.29□□□□□ -0.76
CLN6-212ENST00000636020 PACRGQ96M98 296 aaPredicted RBP10.28□□□□□ -0.76
CLN6-212ENST00000636020 IFITM10A6NMD0 228 aa10.27□□□□□ -0.77
CLN6-212ENST00000636020 K7EMI3 77 aa10.27□□□□□ -0.77
CLN6-212ENST00000636020 TCAPO15273 167 aa10.27□□□□□ -0.77
CLN6-212ENST00000636020 HSBP1O75506 76 aa10.27□□□□□ -0.77
CLN6-212ENST00000636020 PDZD11Q5EBL8 140 aa10.27□□□□□ -0.77
CLN6-212ENST00000636020 A0A096LNJ9 63 aa10.26□□□□□ -0.77
CLN6-212ENST00000636020 LORP23490 312 aaPredicted RBP10.26□□□□□ -0.77
CLN6-212ENST00000636020 KRTAP19-2Q3LHN2 52 aa10.26□□□□□ -0.77
CLN6-212ENST00000636020 TP73-AS1Q9UF72 201 aa10.26□□□□□ -0.77
CLN6-212ENST00000636020 MRPL55Q7Z7F7 128 aaKnown RBP10.25□□□□□ -0.77
CLN6-212ENST00000636020 KRTAP13-1Q8IUC0 172 aa10.25□□□□□ -0.77
CLN6-212ENST00000636020 FAM19A2Q8N3H0 131 aa10.25□□□□□ -0.77
CLN6-212ENST00000636020 LINC00469Q8N7U9 141 aa10.25□□□□□ -0.77
CLN6-212ENST00000636020 PMCHL1Q16048 86 aa10.24□□□□□ -0.77
CLN6-212ENST00000636020 TMEM18Q96B42 140 aa10.24□□□□□ -0.77
CLN6-212ENST00000636020 KIR2DL4Q99706 377 aa10.24□□□□□ -0.77
CLN6-212ENST00000636020 ORMDL2Q53FV1 153 aa10.23□□□□□ -0.77
CLN6-212ENST00000636020 HIST1H2BLQ99880 126 aa10.23□□□□□ -0.77
CLN6-212ENST00000636020 XAGE1AQ9HD64 81 aa10.23□□□□□ -0.77
CLN6-212ENST00000636020 LOC105371267A0A1B0GV96 52 aa10.22□□□□□ -0.77
CLN6-212ENST00000636020 HBDP02042 147 aa10.22□□□□□ -0.77
CLN6-212ENST00000636020 S100A2P29034 98 aa10.22□□□□□ -0.77
CLN6-212ENST00000636020 KRTAP10-6P60371 365 aaPredicted RBP10.22□□□□□ -0.77
CLN6-212ENST00000636020 RPL39P62891 51 aaKnown RBP10.21□□□□□ -0.77
CLN6-212ENST00000636020 RPL37AP8A6NKH3 93 aa10.2□□□□□ -0.78
CLN6-212ENST00000636020 FABP4P15090 132 aa10.2□□□□□ -0.78
CLN6-212ENST00000636020 LINC00167Q96N53 147 aa10.2□□□□□ -0.78
CLN6-212ENST00000636020 UBE2AP49459 152 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 185.9 ms