RNA–Protein interactions for RNA: ENST00000636012.1

CACNA1A-221, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-221ENST00000636012 PYGO1Q9Y3Y4 419 aa11.62□□□□□ -0.55
CACNA1A-221ENST00000636012 XGP55808 180 aa11.62□□□□□ -0.55
CACNA1A-221ENST00000636012 EDN2P20800 178 aa11.61□□□□□ -0.55
CACNA1A-221ENST00000636012 U3KQK5 164 aa11.61□□□□□ -0.55
CACNA1A-221ENST00000636012 FSTL3O95633 263 aa11.61□□□□□ -0.55
CACNA1A-221ENST00000636012 EIF4EBP1Q13541 118 aaPredicted RBP11.61□□□□□ -0.55
CACNA1A-221ENST00000636012 VPREB1P12018 145 aa11.6□□□□□ -0.55
CACNA1A-221ENST00000636012 PRR3P79522 188 aaKnown RBP11.6□□□□□ -0.55
CACNA1A-221ENST00000636012 GOLGB1Q14789 3259 aaKnown RBP11.6□□□□□ -0.55
CACNA1A-221ENST00000636012 SSBP3-AS1Q7Z2R9 100 aa11.59□□□□□ -0.55
CACNA1A-221ENST00000636012 CDSNQ15517 529 aa11.59□□□□□ -0.55
CACNA1A-221ENST00000636012 UNQ6190/PRO20217Q6UXQ8 127 aa11.58□□□□□ -0.56
CACNA1A-221ENST00000636012 FN1P02751 2386 aaKnown RBP11.58□□□□□ -0.56
CACNA1A-221ENST00000636012 SPACA4Q8TDM5 124 aa11.58□□□□□ -0.56
CACNA1A-221ENST00000636012 C2orf48Q96LS8 159 aa11.58□□□□□ -0.56
CACNA1A-221ENST00000636012 CDC42SE2Q9NRR3 84 aa11.57□□□□□ -0.56
CACNA1A-221ENST00000636012 F8P00451 2351 aa11.57□□□□□ -0.56
CACNA1A-221ENST00000636012 Q8IZM0 81 aa11.57□□□□□ -0.56
CACNA1A-221ENST00000636012 HCG22E2RYF7 251 aa11.57□□□□□ -0.56
CACNA1A-221ENST00000636012 MRPS36P82909 103 aaKnown RBP11.57□□□□□ -0.56
CACNA1A-221ENST00000636012 A0A1B0GU69 56 aa11.56□□□□□ -0.56
CACNA1A-221ENST00000636012 Q6ZTC4 211 aa11.56□□□□□ -0.56
CACNA1A-221ENST00000636012 hDV103S1A0JD37 113 aa11.56□□□□□ -0.56
CACNA1A-221ENST00000636012 IGLV1-40P01703 118 aa11.56□□□□□ -0.56
CACNA1A-221ENST00000636012 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.56□□□□□ -0.56
CACNA1A-221ENST00000636012 EP400Q96L91 3159 aa11.55□□□□□ -0.56
CACNA1A-221ENST00000636012 KLLNB2CW77 178 aa11.55□□□□□ -0.56
CACNA1A-221ENST00000636012 TRBV7-7A0A0K0K1E9 115 aa11.55□□□□□ -0.56
CACNA1A-221ENST00000636012 ZNF295-AS1Q8N0V1 137 aa11.55□□□□□ -0.56
CACNA1A-221ENST00000636012 C1orf134Q5TEV5 83 aa11.55□□□□□ -0.56
CACNA1A-221ENST00000636012 COX6A2Q02221 97 aa11.54□□□□□ -0.56
CACNA1A-221ENST00000636012 MUC22E2RYF6 1773 aaPredicted RBP11.54□□□□□ -0.56
CACNA1A-221ENST00000636012 KRTAP10-9P60411 292 aa11.54□□□□□ -0.56
CACNA1A-221ENST00000636012 Q9BRP9 147 aa11.54□□□□□ -0.56
CACNA1A-221ENST00000636012 AVPP01185 164 aa11.53□□□□□ -0.56
CACNA1A-221ENST00000636012 GAS8-AS1O95177 125 aa11.53□□□□□ -0.56
CACNA1A-221ENST00000636012 C11orf21Q9P2W6 132 aa11.52□□□□□ -0.57
CACNA1A-221ENST00000636012 Q8N6K4 173 aa11.51□□□□□ -0.57
CACNA1A-221ENST00000636012 SMIM26A0A096LP01 95 aa11.51□□□□□ -0.57
CACNA1A-221ENST00000636012 TRBV10-3A0A0K0K1G6 114 aa11.51□□□□□ -0.57
CACNA1A-221ENST00000636012 COX7CP15954 63 aa11.5□□□□□ -0.57
CACNA1A-221ENST00000636012 FHL2Q14192 279 aa11.49□□□□□ -0.57
CACNA1A-221ENST00000636012 LINC00575Q6W349 94 aa11.49□□□□□ -0.57
CACNA1A-221ENST00000636012 MDFIQ99750 246 aa11.49□□□□□ -0.57
CACNA1A-221ENST00000636012 CRIP3Q6Q6R5 217 aa11.48□□□□□ -0.57
CACNA1A-221ENST00000636012 Q8N814 137 aa11.48□□□□□ -0.57
CACNA1A-221ENST00000636012 PIEZO1Q92508 2521 aa11.47□□□□□ -0.57
CACNA1A-221ENST00000636012 IGLV4-60A0A075B6I1 120 aa11.47□□□□□ -0.57
CACNA1A-221ENST00000636012 A0A087WVE0 104 aa11.47□□□□□ -0.57
CACNA1A-221ENST00000636012 APLNQ9ULZ1 77 aa11.47□□□□□ -0.57
CACNA1A-221ENST00000636012 POLR2KP53803 58 aaKnown RBP11.46□□□□□ -0.58
CACNA1A-221ENST00000636012 NTM-AS1Q6ZSK4 140 aa11.46□□□□□ -0.58
CACNA1A-221ENST00000636012 A8MTW9 85 aa11.45□□□□□ -0.58
CACNA1A-221ENST00000636012 A0A087WSZ3 146 aa11.45□□□□□ -0.58
CACNA1A-221ENST00000636012 EGFEM1PQ0D2K5 195 aa11.45□□□□□ -0.58
CACNA1A-221ENST00000636012 ODF3L2Q3SX64 289 aa11.44□□□□□ -0.58
CACNA1A-221ENST00000636012 CENPFP49454 3210 aa11.44□□□□□ -0.58
CACNA1A-221ENST00000636012 A0A087WYN8 130 aa11.44□□□□□ -0.58
CACNA1A-221ENST00000636012 TRAV7A0A075B6U4 112 aa11.44□□□□□ -0.58
CACNA1A-221ENST00000636012 IMUPQ9GZP8 106 aa11.43□□□□□ -0.58
CACNA1A-221ENST00000636012 C2orf91Q6ZV80 131 aa11.43□□□□□ -0.58
CACNA1A-221ENST00000636012 IGLV1-51P01701 117 aa11.42□□□□□ -0.58
CACNA1A-221ENST00000636012 LINC00242Q5T6M2 205 aa11.42□□□□□ -0.58
CACNA1A-221ENST00000636012 COX6B2Q6YFQ2 88 aa11.41□□□□□ -0.58
CACNA1A-221ENST00000636012 ATP11AUNQ6ZP68 121 aa11.41□□□□□ -0.58
CACNA1A-221ENST00000636012 NAV2Q8IVL1 2488 aa11.41□□□□□ -0.58
CACNA1A-221ENST00000636012 MUC7Q8TAX7 377 aa11.4□□□□□ -0.58
CACNA1A-221ENST00000636012 C1orf64Q8NEQ6 169 aa11.4□□□□□ -0.58
CACNA1A-221ENST00000636012 IGF2RP11717 2491 aa11.39□□□□□ -0.59
CACNA1A-221ENST00000636012 IGIPA6NJ69 53 aa11.39□□□□□ -0.59
CACNA1A-221ENST00000636012 CHTF8P0CG12 524 aa11.38□□□□□ -0.59
CACNA1A-221ENST00000636012 TLN1Q9Y490 2541 aaKnown RBP11.38□□□□□ -0.59
CACNA1A-221ENST00000636012 SMIM1B2RUZ4 78 aa11.38□□□□□ -0.59
CACNA1A-221ENST00000636012 TMEM254Q8TBM7 123 aa11.37□□□□□ -0.59
CACNA1A-221ENST00000636012 TLN2Q9Y4G6 2542 aa11.37□□□□□ -0.59
CACNA1A-221ENST00000636012 LYPD5Q6UWN5 251 aa11.37□□□□□ -0.59
CACNA1A-221ENST00000636012 Q8N3U1 123 aa11.37□□□□□ -0.59
CACNA1A-221ENST00000636012 CHCHD7Q9BUK0 85 aa11.37□□□□□ -0.59
CACNA1A-221ENST00000636012 LIMD2Q9BT23 127 aa11.36□□□□□ -0.59
CACNA1A-221ENST00000636012 PCSK5Q92824 1860 aa11.36□□□□□ -0.59
CACNA1A-221ENST00000636012 MOBPQ13875 183 aa11.36□□□□□ -0.59
CACNA1A-221ENST00000636012 PRO3102Q9H379 93 aa11.35□□□□□ -0.59
CACNA1A-221ENST00000636012 Q6JHZ5 121 aa11.34□□□□□ -0.59
CACNA1A-221ENST00000636012 C16orf95Q9H693 158 aa11.34□□□□□ -0.59
CACNA1A-221ENST00000636012 J3QL48 77 aa11.34□□□□□ -0.59
CACNA1A-221ENST00000636012 Q6ZSN1 163 aa11.34□□□□□ -0.59
CACNA1A-221ENST00000636012 NHLRC4P0CG21 123 aaPredicted RBP11.34□□□□□ -0.59
CACNA1A-221ENST00000636012 ABCA12Q86UK0 2595 aa11.33□□□□□ -0.6
CACNA1A-221ENST00000636012 LINC01554Q52M75 96 aa11.33□□□□□ -0.6
CACNA1A-221ENST00000636012 JMJD1CQ15652 2540 aa11.33□□□□□ -0.6
CACNA1A-221ENST00000636012 FHL3Q13643 280 aa11.31□□□□□ -0.6
CACNA1A-221ENST00000636012 C6orf48Q9UBA6 75 aa11.31□□□□□ -0.6
CACNA1A-221ENST00000636012 Q6ZRU5 148 aa11.3□□□□□ -0.6
CACNA1A-221ENST00000636012 ANKRD17O75179 2603 aaKnown RBP11.3□□□□□ -0.6
CACNA1A-221ENST00000636012 ADAMTSL4-AS1Q5T5F5 129 aa11.3□□□□□ -0.6
CACNA1A-221ENST00000636012 ZNF580Q9UK33 172 aa11.3□□□□□ -0.6
CACNA1A-221ENST00000636012 CNFNQ9BYD5 112 aa11.29□□□□□ -0.6
CACNA1A-221ENST00000636012 FLG2Q5D862 2391 aaPredicted RBP11.28□□□□□ -0.6
CACNA1A-221ENST00000636012 C8orf87E5RJ46 101 aa11.27□□□□□ -0.6
CACNA1A-221ENST00000636012 TSPEAR-AS2P59090 65 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms