RNA–Protein interactions for RNA: ENST00000629570.1

LINC00550-202, long intergenic non-protein coding RNA 550, humanhuman

TSL 3

Gene LINC00550, Length 317 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-202ENST00000629570 FAM19A2Q8N3H0 131 aa3.55□□□□□ -1.84
LINC00550-202ENST00000629570 OR10D4PQ8NGN7 298 aa3.55□□□□□ -1.84
LINC00550-202ENST00000629570 CARD19Q96LW7 228 aa3.55□□□□□ -1.84
LINC00550-202ENST00000629570 CHAC1Q9BUX1 264 aa3.55□□□□□ -1.84
LINC00550-202ENST00000629570 CDKN2A-AS1Q9UH64 79 aa3.55□□□□□ -1.84
LINC00550-202ENST00000629570 FAT1Q14517 4588 aa3.54□□□□□ -1.84
LINC00550-202ENST00000629570 A0A096LNI7 61 aa3.54□□□□□ -1.84
LINC00550-202ENST00000629570 NUPR1O60356 82 aa3.54□□□□□ -1.84
LINC00550-202ENST00000629570 HIST1H2BKO60814 126 aa3.54□□□□□ -1.84
LINC00550-202ENST00000629570 HSBP1O75506 76 aa3.54□□□□□ -1.84
LINC00550-202ENST00000629570 SMR3BP02814 79 aaPredicted RBP3.54□□□□□ -1.84
LINC00550-202ENST00000629570 HIST1H2BJP06899 126 aa3.54□□□□□ -1.84
LINC00550-202ENST00000629570 HIST1H2BOP23527 126 aa3.54□□□□□ -1.84
LINC00550-202ENST00000629570 HIST1H2BBP33778 126 aa3.54□□□□□ -1.84
LINC00550-202ENST00000629570 NDUFA6P56556 154 aa3.54□□□□□ -1.84
LINC00550-202ENST00000629570 HIST1H2BDP58876 126 aa3.54□□□□□ -1.84
LINC00550-202ENST00000629570 HIST1H2BCP62807 126 aa3.54□□□□□ -1.84
LINC00550-202ENST00000629570 HERVK_113P63121 156 aa3.54□□□□□ -1.84
LINC00550-202ENST00000629570 KIAA0087Q14695 138 aa3.54□□□□□ -1.84
LINC00550-202ENST00000629570 HIST2H2BEQ16778 126 aa3.54□□□□□ -1.84
LINC00550-202ENST00000629570 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.54□□□□□ -1.84
LINC00550-202ENST00000629570 C10orf25Q5T742 122 aa3.54□□□□□ -1.84
LINC00550-202ENST00000629570 LINC00469Q8N7U9 141 aa3.54□□□□□ -1.84
LINC00550-202ENST00000629570 CIRBP-AS1Q8TBR5 109 aa3.54□□□□□ -1.84
LINC00550-202ENST00000629570 HIST1H2BHQ93079 126 aa3.54□□□□□ -1.84
LINC00550-202ENST00000629570 C2orf48Q96LS8 159 aa3.54□□□□□ -1.84
LINC00550-202ENST00000629570 CAMK2N2Q96S95 79 aa3.54□□□□□ -1.84
LINC00550-202ENST00000629570 HIST1H2BNQ99877 126 aa3.54□□□□□ -1.84
LINC00550-202ENST00000629570 HIST1H2BMQ99879 126 aa3.54□□□□□ -1.84
LINC00550-202ENST00000629570 GEMIN7Q9H840 131 aaKnown RBP3.54□□□□□ -1.84
LINC00550-202ENST00000629570 IGLV5-45A0A087WSX0 123 aa3.53□□□□□ -1.84
LINC00550-202ENST00000629570 IGKV2-24A0A0C4DH68 120 aa3.53□□□□□ -1.84
LINC00550-202ENST00000629570 TINCRA0A1B0GVN0 87 aa3.53□□□□□ -1.84
LINC00550-202ENST00000629570 ATP5LO75964 103 aa3.53□□□□□ -1.84
LINC00550-202ENST00000629570 SPINK8P0C7L1 97 aa3.53□□□□□ -1.84
LINC00550-202ENST00000629570 S100A1P23297 94 aa3.53□□□□□ -1.84
LINC00550-202ENST00000629570 SEC11AP67812 179 aa3.53□□□□□ -1.84
LINC00550-202ENST00000629570 CIRBPQ14011 172 aaKnown RBP3.53□□□□□ -1.84
LINC00550-202ENST00000629570 C2orf82Q6UX34 121 aa3.53□□□□□ -1.84
LINC00550-202ENST00000629570 UNQ6190/PRO20217Q6UXQ8 127 aa3.53□□□□□ -1.84
LINC00550-202ENST00000629570 LINC01561Q8N1V8 128 aa3.53□□□□□ -1.84
LINC00550-202ENST00000629570 SPACA4Q8TDM5 124 aa3.53□□□□□ -1.84
LINC00550-202ENST00000629570 IFI27L1Q96BM0 104 aa3.53□□□□□ -1.84
LINC00550-202ENST00000629570 TOMM7Q9P0U1 55 aa3.53□□□□□ -1.84
LINC00550-202ENST00000629570 C6orf48Q9UBA6 75 aa3.53□□□□□ -1.84
LINC00550-202ENST00000629570 SRRM2Q9UQ35 2752 aaKnown RBP3.53□□□□□ -1.84
LINC00550-202ENST00000629570 C11orf86A6NJI1 115 aa3.52□□□□□ -1.85
LINC00550-202ENST00000629570 SMIM1B2RUZ4 78 aa3.52□□□□□ -1.85
LINC00550-202ENST00000629570 NDUFA1O15239 70 aa3.52□□□□□ -1.85
LINC00550-202ENST00000629570 IGLC3P0DOY3 106 aa3.52□□□□□ -1.85
LINC00550-202ENST00000629570 Q5VSD8 79 aa3.52□□□□□ -1.85
LINC00550-202ENST00000629570 PACRGQ96M98 296 aaPredicted RBP3.52□□□□□ -1.85
LINC00550-202ENST00000629570 MRPL35Q9NZE8 188 aaKnown RBP3.52□□□□□ -1.85
LINC00550-202ENST00000629570 A0A087WYN8 130 aa3.51□□□□□ -1.85
LINC00550-202ENST00000629570 LOC107984640A0A0U1RRK4 108 aa3.51□□□□□ -1.85
LINC00550-202ENST00000629570 EPM2AB3EWF7 344 aa3.51□□□□□ -1.85
LINC00550-202ENST00000629570 H0Y8G0 127 aa3.51□□□□□ -1.85
LINC00550-202ENST00000629570 PRSS2P07478 247 aa3.51□□□□□ -1.85
LINC00550-202ENST00000629570 FABP4P15090 132 aa3.51□□□□□ -1.85
LINC00550-202ENST00000629570 ZNF22P17026 224 aaPredicted RBP3.51□□□□□ -1.85
LINC00550-202ENST00000629570 PTTG1IPP53801 180 aa3.51□□□□□ -1.85
LINC00550-202ENST00000629570 RPL18AQ02543 176 aaKnown RBP3.51□□□□□ -1.85
LINC00550-202ENST00000629570 GAGE2BQ13066 116 aa3.51□□□□□ -1.85
LINC00550-202ENST00000629570 MAJINQ3KP22 176 aa3.51□□□□□ -1.85
LINC00550-202ENST00000629570 C9orf116Q5BN46 136 aaPredicted RBP3.51□□□□□ -1.85
LINC00550-202ENST00000629570 Q8IZM0 81 aa3.51□□□□□ -1.85
LINC00550-202ENST00000629570 CHTOPQ9Y3Y2 248 aaKnown RBP3.51□□□□□ -1.85
LINC00550-202ENST00000629570 FLG2Q5D862 2391 aaPredicted RBP3.51□□□□□ -1.85
LINC00550-202ENST00000629570 TRAV12-1A0A0B4J245 112 aa3.5□□□□□ -1.85
LINC00550-202ENST00000629570 IGLV5-39A0A0G2JS06 123 aa3.5□□□□□ -1.85
LINC00550-202ENST00000629570 F8VRH5 84 aa3.5□□□□□ -1.85
LINC00550-202ENST00000629570 F8WDY8 70 aa3.5□□□□□ -1.85
LINC00550-202ENST00000629570 H3BRM9 83 aa3.5□□□□□ -1.85
LINC00550-202ENST00000629570 LEPROTL1O95214 131 aa3.5□□□□□ -1.85
LINC00550-202ENST00000629570 CKS1BP61024 79 aa3.5□□□□□ -1.85
LINC00550-202ENST00000629570 ODF1Q14990 250 aa3.5□□□□□ -1.85
LINC00550-202ENST00000629570 C6orf226Q5I0X4 101 aa3.5□□□□□ -1.85
LINC00550-202ENST00000629570 TMEM170BQ5T4T1 132 aa3.5□□□□□ -1.85
LINC00550-202ENST00000629570 Q6ZRP5 223 aa3.5□□□□□ -1.85
LINC00550-202ENST00000629570 STPG4Q8N801 248 aa3.5□□□□□ -1.85
LINC00550-202ENST00000629570 COX7B2Q8TF08 81 aa3.5□□□□□ -1.85
LINC00550-202ENST00000629570 DPH3Q96FX2 82 aa3.5□□□□□ -1.85
LINC00550-202ENST00000629570 PMCHL2Q9BQD1 86 aa3.5□□□□□ -1.85
LINC00550-202ENST00000629570 PLAC8Q9NZF1 115 aa3.5□□□□□ -1.85
LINC00550-202ENST00000629570 HSPB8Q9UJY1 196 aa3.5□□□□□ -1.85
LINC00550-202ENST00000629570 TRBV30A0A0K0K1B3 111 aa3.49□□□□□ -1.85
LINC00550-202ENST00000629570 KRTAP10-4P60372 401 aaPredicted RBP3.49□□□□□ -1.85
LINC00550-202ENST00000629570 GAGE2EQ4V326 116 aa3.49□□□□□ -1.85
LINC00550-202ENST00000629570 COA6Q5JTJ3 125 aaKnown RBP3.49□□□□□ -1.85
LINC00550-202ENST00000629570 LINC00474Q9P2X8 69 aa3.49□□□□□ -1.85
LINC00550-202ENST00000629570 GAGE2DQ9UEU5 116 aa3.49□□□□□ -1.85
LINC00550-202ENST00000629570 PKIGQ9Y2B9 76 aa3.49□□□□□ -1.85
LINC00550-202ENST00000629570 VPS13BQ7Z7G8 4022 aa3.48□□□□□ -1.85
LINC00550-202ENST00000629570 A0A1W2PNN7 141 aa3.48□□□□□ -1.85
LINC00550-202ENST00000629570 TMEM223A0PJW6 202 aa3.48□□□□□ -1.85
LINC00550-202ENST00000629570 FAM168BA1KXE4 195 aa3.48□□□□□ -1.85
LINC00550-202ENST00000629570 NDUFC2-KCTD14E9PQ53 114 aa3.48□□□□□ -1.85
LINC00550-202ENST00000629570 TLX1NBP0CAT3 122 aa3.48□□□□□ -1.85
LINC00550-202ENST00000629570 CXCL5P42830 114 aa3.48□□□□□ -1.85
LINC00550-202ENST00000629570 MYCBP2O75592 4640 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms