RNA–Protein interactions for RNA: ENST00000629089.1

SPTAN1-217, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 1,546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-217ENST00000629089 PAM16Q9Y3D7 125 aa11.52□□□□□ -0.57
SPTAN1-217ENST00000629089 FRAS1Q86XX4 4008 aa11.52□□□□□ -0.57
SPTAN1-217ENST00000629089 SLPIP03973 132 aa11.51□□□□□ -0.57
SPTAN1-217ENST00000629089 UNQ6190/PRO20217Q6UXQ8 127 aa11.51□□□□□ -0.57
SPTAN1-217ENST00000629089 NDUFA12Q9UI09 145 aa11.51□□□□□ -0.57
SPTAN1-217ENST00000629089 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.5□□□□□ -0.57
SPTAN1-217ENST00000629089 Q6ZRU5 148 aa11.5□□□□□ -0.57
SPTAN1-217ENST00000629089 CARD19Q96LW7 228 aa11.5□□□□□ -0.57
SPTAN1-217ENST00000629089 DNAH17Q9UFH2 4485 aa11.5□□□□□ -0.57
SPTAN1-217ENST00000629089 SMIM6P0DI80 62 aa11.5□□□□□ -0.57
SPTAN1-217ENST00000629089 CNBPP62633 177 aaKnown RBP11.5□□□□□ -0.57
SPTAN1-217ENST00000629089 SPATA45Q537H7 98 aa11.5□□□□□ -0.57
SPTAN1-217ENST00000629089 C10orf25Q5T742 122 aa11.5□□□□□ -0.57
SPTAN1-217ENST00000629089 SFTA2Q6UW10 78 aa11.5□□□□□ -0.57
SPTAN1-217ENST00000629089 MYMXA0A1B0GTQ4 84 aa11.49□□□□□ -0.57
SPTAN1-217ENST00000629089 S100A12P80511 92 aa11.49□□□□□ -0.57
SPTAN1-217ENST00000629089 FUSP35637 526 aaKnown RBP eCLIP11.48□□□□□ -0.57
SPTAN1-217ENST00000629089 ZNF625Q96I27 306 aaPredicted RBP11.48□□□□□ -0.57
SPTAN1-217ENST00000629089 TTTY13Q9BZ97 58 aa11.48□□□□□ -0.57
SPTAN1-217ENST00000629089 IGLV5-52A0A0A0MRZ9 124 aa11.47□□□□□ -0.57
SPTAN1-217ENST00000629089 C6orf48Q9UBA6 75 aa11.47□□□□□ -0.57
SPTAN1-217ENST00000629089 TRBV30A0A0K0K1B3 111 aa11.46□□□□□ -0.57
SPTAN1-217ENST00000629089 ZNF815PA8K554 130 aa11.46□□□□□ -0.57
SPTAN1-217ENST00000629089 HERV-K104P63124 156 aa11.46□□□□□ -0.57
SPTAN1-217ENST00000629089 PCP2Q8IVA1 136 aa11.46□□□□□ -0.57
SPTAN1-217ENST00000629089 KRTAP10-2P60368 255 aa11.45□□□□□ -0.58
SPTAN1-217ENST00000629089 PGPEP1Q9NXJ5 209 aa11.45□□□□□ -0.58
SPTAN1-217ENST00000629089 RYR3Q15413 4870 aa11.44□□□□□ -0.58
SPTAN1-217ENST00000629089 RNF151Q2KHN1 245 aa11.44□□□□□ -0.58
SPTAN1-217ENST00000629089 C9orf116Q5BN46 136 aaPredicted RBP11.44□□□□□ -0.58
SPTAN1-217ENST00000629089 MEIG1Q5JSS6 88 aa11.44□□□□□ -0.58
SPTAN1-217ENST00000629089 C9orf163Q8N9P6 203 aa11.44□□□□□ -0.58
SPTAN1-217ENST00000629089 C14orf144Q96I85 54 aa11.42□□□□□ -0.58
SPTAN1-217ENST00000629089 ERG28Q9UKR5 140 aa11.42□□□□□ -0.58
SPTAN1-217ENST00000629089 FAT2Q9NYQ8 4349 aa11.42□□□□□ -0.58
SPTAN1-217ENST00000629089 A0A1B0GVY2 172 aa11.41□□□□□ -0.58
SPTAN1-217ENST00000629089 COX8AP10176 69 aa11.41□□□□□ -0.58
SPTAN1-217ENST00000629089 PFN2P35080 140 aa11.41□□□□□ -0.58
SPTAN1-217ENST00000629089 LINC01620Q4KN68 170 aa11.41□□□□□ -0.58
SPTAN1-217ENST00000629089 SCGB1D4Q6XE38 83 aa11.41□□□□□ -0.58
SPTAN1-217ENST00000629089 A0A0J9YXY3 114 aa11.4□□□□□ -0.58
SPTAN1-217ENST00000629089 C12orf57Q99622 126 aa11.4□□□□□ -0.58
SPTAN1-217ENST00000629089 A0A0U1RRA0 63 aa11.4□□□□□ -0.59
SPTAN1-217ENST00000629089 LINC00587B1AMM8 73 aa11.4□□□□□ -0.59
SPTAN1-217ENST00000629089 LOC107984640A0A0U1RRK4 108 aa11.39□□□□□ -0.59
SPTAN1-217ENST00000629089 LINC00158P58513 81 aa11.39□□□□□ -0.59
SPTAN1-217ENST00000629089 RPL18AQ02543 176 aaKnown RBP11.39□□□□□ -0.59
SPTAN1-217ENST00000629089 CIRBPQ14011 172 aaKnown RBP11.39□□□□□ -0.59
SPTAN1-217ENST00000629089 COX17Q14061 63 aa11.39□□□□□ -0.59
SPTAN1-217ENST00000629089 BOD1L2Q8IYS8 172 aa11.39□□□□□ -0.59
SPTAN1-217ENST00000629089 NDUFC2-KCTD14E9PQ53 114 aa11.38□□□□□ -0.59
SPTAN1-217ENST00000629089 SMIM13P0DJ93 91 aa11.38□□□□□ -0.59
SPTAN1-217ENST00000629089 PKIGQ9Y2B9 76 aa11.38□□□□□ -0.59
SPTAN1-217ENST00000629089 TLX1NBP0CAT3 122 aa11.37□□□□□ -0.59
SPTAN1-217ENST00000629089 GCSHP23434 173 aa11.37□□□□□ -0.59
SPTAN1-217ENST00000629089 SLC25A34Q6PIV7 304 aa11.37□□□□□ -0.59
SPTAN1-217ENST00000629089 TP73-AS1Q9UF72 201 aa11.37□□□□□ -0.59
SPTAN1-217ENST00000629089 DLEU1O43261 78 aa11.35□□□□□ -0.59
SPTAN1-217ENST00000629089 GAGE2BQ13066 116 aa11.35□□□□□ -0.59
SPTAN1-217ENST00000629089 GAGE2EQ4V326 116 aa11.35□□□□□ -0.59
SPTAN1-217ENST00000629089 SDIM1Q6ZPB5 146 aa11.35□□□□□ -0.59
SPTAN1-217ENST00000629089 Q6ZRP5 223 aa11.35□□□□□ -0.59
SPTAN1-217ENST00000629089 GAGE2DQ9UEU5 116 aa11.35□□□□□ -0.59
SPTAN1-217ENST00000629089 LINC00518Q8N0U6 118 aa11.35□□□□□ -0.59
SPTAN1-217ENST00000629089 C16orf90A8MZG2 172 aa11.34□□□□□ -0.59
SPTAN1-217ENST00000629089 PKD1P98161 4303 aa11.33□□□□□ -0.6
SPTAN1-217ENST00000629089 DNAH11Q96DT5 4516 aa11.33□□□□□ -0.6
SPTAN1-217ENST00000629089 IGKV2-24A0A0C4DH68 120 aa11.33□□□□□ -0.6
SPTAN1-217ENST00000629089 TMEM238C9JI98 176 aa11.33□□□□□ -0.6
SPTAN1-217ENST00000629089 TIMM17BO60830 172 aa11.33□□□□□ -0.6
SPTAN1-217ENST00000629089 MIR7-3HGQ8N6C7 128 aa11.33□□□□□ -0.6
SPTAN1-217ENST00000629089 A0A096LNI7 61 aa11.32□□□□□ -0.6
SPTAN1-217ENST00000629089 PTTG1IPP53801 180 aa11.32□□□□□ -0.6
SPTAN1-217ENST00000629089 DAND5Q8N907 189 aa11.32□□□□□ -0.6
SPTAN1-217ENST00000629089 PRO1933Q9H354 126 aa11.32□□□□□ -0.6
SPTAN1-217ENST00000629089 ADAMTSL4-AS1Q5T5F5 129 aa11.31□□□□□ -0.6
SPTAN1-217ENST00000629089 UQCR10Q9UDW1 63 aa11.31□□□□□ -0.6
SPTAN1-217ENST00000629089 LITAFQ99732 161 aa11.3□□□□□ -0.6
SPTAN1-217ENST00000629089 XAGE1AQ9HD64 81 aa11.3□□□□□ -0.6
SPTAN1-217ENST00000629089 HECTD4Q9Y4D8 3996 aa11.3□□□□□ -0.6
SPTAN1-217ENST00000629089 CHTF8P0CG12 524 aa11.3□□□□□ -0.6
SPTAN1-217ENST00000629089 KRTAP10-1P60331 282 aa11.3□□□□□ -0.6
SPTAN1-217ENST00000629089 SND1-IT1Q9HBX3 110 aa11.3□□□□□ -0.6
SPTAN1-217ENST00000629089 NPC2P61916 151 aa11.29□□□□□ -0.6
SPTAN1-217ENST00000629089 LINC00474Q9P2X8 69 aa11.29□□□□□ -0.6
SPTAN1-217ENST00000629089 SRSF9Q13242 221 aaKnown RBP eCLIP11.28□□□□□ -0.6
SPTAN1-217ENST00000629089 DPH3Q96FX2 82 aa11.28□□□□□ -0.6
SPTAN1-217ENST00000629089 MIEN1Q9BRT3 115 aa11.28□□□□□ -0.6
SPTAN1-217ENST00000629089 TSTD3H0UI37 97 aa11.27□□□□□ -0.61
SPTAN1-217ENST00000629089 SPANXDQ9BXN6 97 aa11.27□□□□□ -0.61
SPTAN1-217ENST00000629089 SPANXCQ9NY87 97 aa11.27□□□□□ -0.61
SPTAN1-217ENST00000629089 C9orf129Q5T035 196 aaKnown RBP11.26□□□□□ -0.61
SPTAN1-217ENST00000629089 C2orf91Q6ZV80 131 aa11.26□□□□□ -0.61
SPTAN1-217ENST00000629089 SPANXB1Q9NS25 103 aaPredicted RBP11.26□□□□□ -0.61
SPTAN1-217ENST00000629089 HIGD1BQ9P298 99 aa11.26□□□□□ -0.61
SPTAN1-217ENST00000629089 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.26□□□□□ -0.61
SPTAN1-217ENST00000629089 PANO1I0J062 215 aa11.25□□□□□ -0.61
SPTAN1-217ENST00000629089 Q6ZVH6 145 aa11.25□□□□□ -0.61
SPTAN1-217ENST00000629089 SPACA4Q8TDM5 124 aa11.25□□□□□ -0.61
SPTAN1-217ENST00000629089 HIST1H4GQ99525 98 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms