RNA–Protein interactions for RNA: ENST00000629047.1

SPTAN1-216, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-216ENST00000629047 IGHV4-31P0DP07 118 aa1.41□□□□□ -2.18
SPTAN1-216ENST00000629047 CMC4P56277 68 aaPredicted RBP1.41□□□□□ -2.18
SPTAN1-216ENST00000629047 COX6A2Q02221 97 aa1.41□□□□□ -2.18
SPTAN1-216ENST00000629047 BSPH1Q075Z2 132 aa1.41□□□□□ -2.18
SPTAN1-216ENST00000629047 KLK9Q2XQG4 91 aa1.41□□□□□ -2.18
SPTAN1-216ENST00000629047 DEFB112Q30KQ8 113 aa1.41□□□□□ -2.18
SPTAN1-216ENST00000629047 C9orf129Q5T035 196 aaKnown RBP1.41□□□□□ -2.18
SPTAN1-216ENST00000629047 LCE3EQ5T5B0 92 aa1.41□□□□□ -2.18
SPTAN1-216ENST00000629047 C10orf25Q5T742 122 aa1.41□□□□□ -2.18
SPTAN1-216ENST00000629047 SPAG11AQ6PDA7 123 aa1.41□□□□□ -2.18
SPTAN1-216ENST00000629047 SMIM29Q86T20 159 aa1.41□□□□□ -2.18
SPTAN1-216ENST00000629047 Q8N9W7 124 aa1.41□□□□□ -2.18
SPTAN1-216ENST00000629047 ZNF706Q9Y5V0 76 aaPredicted RBP1.41□□□□□ -2.18
SPTAN1-216ENST00000629047 PRRC2BQ5JSZ5 2229 aaKnown RBP1.41□□□□□ -2.18
SPTAN1-216ENST00000629047 ZNF407Q9C0G0 2248 aa1.41□□□□□ -2.18
SPTAN1-216ENST00000629047 DSCAML1Q8TD84 2053 aa1.41□□□□□ -2.18
SPTAN1-216ENST00000629047 POLEQ07864 2286 aa1.41□□□□□ -2.18
SPTAN1-216ENST00000629047 KNTC1P50748 2209 aa1.4□□□□□ -2.18
SPTAN1-216ENST00000629047 PRRC2AP48634 2157 aaKnown RBP1.4□□□□□ -2.19
SPTAN1-216ENST00000629047 RP1P56715 2156 aa1.4□□□□□ -2.19
SPTAN1-216ENST00000629047 MED12Q93074 2177 aa1.4□□□□□ -2.19
SPTAN1-216ENST00000629047 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.4□□□□□ -2.19
SPTAN1-216ENST00000629047 IGHV3OR16-9A0A0B4J2B5 98 aa1.4□□□□□ -2.19
SPTAN1-216ENST00000629047 LCE6AA0A183 80 aa1.4□□□□□ -2.19
SPTAN1-216ENST00000629047 H0Y9P7 68 aa1.4□□□□□ -2.19
SPTAN1-216ENST00000629047 C3orf84H3BNL1 204 aa1.4□□□□□ -2.19
SPTAN1-216ENST00000629047 IGHV3-11P01762 117 aa1.4□□□□□ -2.19
SPTAN1-216ENST00000629047 PRB2P02812 416 aaPredicted RBP1.4□□□□□ -2.19
SPTAN1-216ENST00000629047 LINC00313P59037 77 aa1.4□□□□□ -2.19
SPTAN1-216ENST00000629047 PRR4Q16378 134 aa1.4□□□□□ -2.19
SPTAN1-216ENST00000629047 SEM1Q6ZVN7 128 aa1.4□□□□□ -2.19
SPTAN1-216ENST00000629047 PCNX2A6NKB5 2137 aa1.4□□□□□ -2.19
SPTAN1-216ENST00000629047 RTTNQ86VV8 2226 aa1.39□□□□□ -2.19
SPTAN1-216ENST00000629047 LINC00959A0A1B0GUT2 108 aa1.39□□□□□ -2.19
SPTAN1-216ENST00000629047 G3V318 75 aa1.39□□□□□ -2.19
SPTAN1-216ENST00000629047 LINC01565O15544 149 aa1.39□□□□□ -2.19
SPTAN1-216ENST00000629047 MOBPQ13875 183 aa1.39□□□□□ -2.19
SPTAN1-216ENST00000629047 FBXL19-AS1Q494R0 122 aa1.39□□□□□ -2.19
SPTAN1-216ENST00000629047 IGFL3Q6UXB1 125 aa1.39□□□□□ -2.19
SPTAN1-216ENST00000629047 COA5Q86WW8 74 aa1.39□□□□□ -2.19
SPTAN1-216ENST00000629047 C5orf56Q8N8D9 126 aa1.39□□□□□ -2.19
SPTAN1-216ENST00000629047 Q8N9L7 120 aa1.39□□□□□ -2.19
SPTAN1-216ENST00000629047 LINC01006Q8NI28 216 aa1.39□□□□□ -2.19
SPTAN1-216ENST00000629047 KCNQ1DNQ9H478 68 aa1.39□□□□□ -2.19
SPTAN1-216ENST00000629047 XAGE1AQ9HD64 81 aa1.39□□□□□ -2.19
SPTAN1-216ENST00000629047 DHRS4-AS1Q9P1J3 65 aa1.39□□□□□ -2.19
SPTAN1-216ENST00000629047 FAM215AQ9Y5M1 114 aa1.39□□□□□ -2.19
SPTAN1-216ENST00000629047 LINC01558Q9Y6Z2 57 aa1.39□□□□□ -2.19
SPTAN1-216ENST00000629047 TNCP24821 2201 aa1.39□□□□□ -2.19
SPTAN1-216ENST00000629047 SEC16AO15027 2179 aa1.38□□□□□ -2.19
SPTAN1-216ENST00000629047 FREM1Q5H8C1 2179 aa1.38□□□□□ -2.19
SPTAN1-216ENST00000629047 IGLV4-60A0A075B6I1 120 aa1.38□□□□□ -2.19
SPTAN1-216ENST00000629047 IGHV4-30-2A0A087WSY4 118 aa1.38□□□□□ -2.19
SPTAN1-216ENST00000629047 IGHV4-28A0A0C4DH34 117 aa1.38□□□□□ -2.19
SPTAN1-216ENST00000629047 IGLV6-57P01721 117 aa1.38□□□□□ -2.19
SPTAN1-216ENST00000629047 IGHV4-59P01825 116 aa1.38□□□□□ -2.19
SPTAN1-216ENST00000629047 PI4KAP42356 2102 aa1.38□□□□□ -2.19
SPTAN1-216ENST00000629047 DEFB131AP59861 70 aa1.38□□□□□ -2.19
SPTAN1-216ENST00000629047 DEFB1P60022 68 aa1.38□□□□□ -2.19
SPTAN1-216ENST00000629047 KRTAP24-1Q3LI83 254 aa1.38□□□□□ -2.19
SPTAN1-216ENST00000629047 KPRPQ5T749 579 aaPredicted RBP1.38□□□□□ -2.19
SPTAN1-216ENST00000629047 WFDC10BQ8IUB3 73 aa1.38□□□□□ -2.19
SPTAN1-216ENST00000629047 ZCCHC13Q8WW36 166 aaKnown RBP1.38□□□□□ -2.19
SPTAN1-216ENST00000629047 FAM104AQ969W3 186 aa1.38□□□□□ -2.19
SPTAN1-216ENST00000629047 C16orf74Q96GX8 76 aa1.38□□□□□ -2.19
SPTAN1-216ENST00000629047 TP53AIP1Q9HCN2 124 aa1.38□□□□□ -2.19
SPTAN1-216ENST00000629047 U3KQA8 63 aa1.38□□□□□ -2.19
SPTAN1-216ENST00000629047 PDE4DIPQ5VU43 2346 aa1.38□□□□□ -2.19
SPTAN1-216ENST00000629047 SRCAPQ6ZRS2 3230 aa1.38□□□□□ -2.19
SPTAN1-216ENST00000629047 NAV3Q8IVL0 2385 aa1.37□□□□□ -2.19
SPTAN1-216ENST00000629047 ARFGEF3Q5TH69 2177 aa1.37□□□□□ -2.19
SPTAN1-216ENST00000629047 IGLV7-46A0A075B6I9 117 aa1.37□□□□□ -2.19
SPTAN1-216ENST00000629047 IGHV6-1A0A0B4J1U7 121 aa1.37□□□□□ -2.19
SPTAN1-216ENST00000629047 A0A1B0GUV1 79 aa1.37□□□□□ -2.19
SPTAN1-216ENST00000629047 CDK2AP2O75956 126 aa1.37□□□□□ -2.19
SPTAN1-216ENST00000629047 DEFB109BQ30KR1 87 aa1.37□□□□□ -2.19
SPTAN1-216ENST00000629047 C1orf137Q5JT78 98 aa1.37□□□□□ -2.19
SPTAN1-216ENST00000629047 DEFB132Q7Z7B7 95 aa1.37□□□□□ -2.19
SPTAN1-216ENST00000629047 DEFB105AQ8NG35 78 aa1.37□□□□□ -2.19
SPTAN1-216ENST00000629047 ZNF702PQ9H963 129 aa1.37□□□□□ -2.19
SPTAN1-216ENST00000629047 KLK12Q9UKR0 248 aa1.37□□□□□ -2.19
SPTAN1-216ENST00000629047 ZGRF1Q86YA3 2104 aa1.37□□□□□ -2.19
SPTAN1-216ENST00000629047 COL27A1Q8IZC6 1860 aaPredicted RBP1.37□□□□□ -2.19
SPTAN1-216ENST00000629047 CNTRLQ7Z7A1 2325 aa1.37□□□□□ -2.19
SPTAN1-216ENST00000629047 GVQW2A0A096LPI5 108 aaPredicted RBP1.36□□□□□ -2.19
SPTAN1-216ENST00000629047 IGHV4-61A0A0C4DH41 118 aa1.36□□□□□ -2.19
SPTAN1-216ENST00000629047 A0A1B0GU69 56 aa1.36□□□□□ -2.19
SPTAN1-216ENST00000629047 LYNX1G3V0Z9 82 aa1.36□□□□□ -2.19
SPTAN1-216ENST00000629047 H3BUX3 64 aa1.36□□□□□ -2.19
SPTAN1-216ENST00000629047 K7ERS5 55 aa1.36□□□□□ -2.19
SPTAN1-216ENST00000629047 UQCR11O14957 56 aa1.36□□□□□ -2.19
SPTAN1-216ENST00000629047 ANGP03950 147 aaKnown RBP1.36□□□□□ -2.19
SPTAN1-216ENST00000629047 LYNX1P0DP58 116 aa1.36□□□□□ -2.19
SPTAN1-216ENST00000629047 LMO4P61968 165 aa1.36□□□□□ -2.19
SPTAN1-216ENST00000629047 PRR3P79522 188 aaKnown RBP1.36□□□□□ -2.19
SPTAN1-216ENST00000629047 LY6EQ16553 131 aa1.36□□□□□ -2.19
SPTAN1-216ENST00000629047 ATP1A1-AS1Q5TC04 95 aa1.36□□□□□ -2.19
SPTAN1-216ENST00000629047 NOTCH2NLQ7Z3S9 236 aa1.36□□□□□ -2.19
SPTAN1-216ENST00000629047 WFDC13Q8IUB5 93 aa1.36□□□□□ -2.19
SPTAN1-216ENST00000629047 Q8NBF4 154 aa1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms