RNA–Protein interactions for RNA: ENST00000628118.1

CHD2-213, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best)

Gene CHD2, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-213ENST00000628118 HIST1H2BBP33778 126 aa5.17□□□□□ -1.58
CHD2-213ENST00000628118 XGP55808 180 aa5.17□□□□□ -1.58
CHD2-213ENST00000628118 NDUFA6P56556 154 aa5.17□□□□□ -1.58
CHD2-213ENST00000628118 HIST1H2BDP58876 126 aa5.17□□□□□ -1.58
CHD2-213ENST00000628118 HIST1H2BCP62807 126 aa5.17□□□□□ -1.58
CHD2-213ENST00000628118 CIRBPQ14011 172 aaKnown RBP5.17□□□□□ -1.58
CHD2-213ENST00000628118 HIST2H2BEQ16778 126 aa5.17□□□□□ -1.58
CHD2-213ENST00000628118 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.17□□□□□ -1.58
CHD2-213ENST00000628118 HIST1H2BHQ93079 126 aa5.17□□□□□ -1.58
CHD2-213ENST00000628118 HIST1H2BNQ99877 126 aa5.17□□□□□ -1.58
CHD2-213ENST00000628118 HIST1H2BMQ99879 126 aa5.17□□□□□ -1.58
CHD2-213ENST00000628118 CHAC1Q9BUX1 264 aa5.17□□□□□ -1.58
CHD2-213ENST00000628118 CDKN2A-AS1Q9UH64 79 aa5.17□□□□□ -1.58
CHD2-213ENST00000628118 HSPG2P98160 4391 aa5.16□□□□□ -1.58
CHD2-213ENST00000628118 TRBV30A0A0K0K1B3 111 aa5.16□□□□□ -1.58
CHD2-213ENST00000628118 LOC107984640A0A0U1RRK4 108 aa5.16□□□□□ -1.58
CHD2-213ENST00000628118 LINC00310P59036 64 aa5.16□□□□□ -1.58
CHD2-213ENST00000628118 KIAA0087Q14695 138 aa5.16□□□□□ -1.58
CHD2-213ENST00000628118 LINC01620Q4KN68 170 aa5.16□□□□□ -1.58
CHD2-213ENST00000628118 COA6Q5JTJ3 125 aaKnown RBP5.16□□□□□ -1.58
CHD2-213ENST00000628118 Q6ZRU5 148 aa5.16□□□□□ -1.58
CHD2-213ENST00000628118 FAM19A2Q8N3H0 131 aa5.16□□□□□ -1.58
CHD2-213ENST00000628118 FAM30AQ9NZY2 134 aa5.16□□□□□ -1.58
CHD2-213ENST00000628118 CHTOPQ9Y3Y2 248 aaKnown RBP5.16□□□□□ -1.58
CHD2-213ENST00000628118 HERC2O95714 4834 aa5.15□□□□□ -1.58
CHD2-213ENST00000628118 SMIM1B2RUZ4 78 aa5.15□□□□□ -1.59
CHD2-213ENST00000628118 F8VRH5 84 aa5.15□□□□□ -1.59
CHD2-213ENST00000628118 TLX1NBP0CAT3 122 aa5.15□□□□□ -1.59
CHD2-213ENST00000628118 CKS1BP61024 79 aa5.15□□□□□ -1.59
CHD2-213ENST00000628118 C6orf226Q5I0X4 101 aa5.15□□□□□ -1.59
CHD2-213ENST00000628118 SFTA2Q6UW10 78 aa5.15□□□□□ -1.59
CHD2-213ENST00000628118 Q8N1X5 172 aa5.15□□□□□ -1.59
CHD2-213ENST00000628118 LINC00526Q96FQ7 95 aa5.15□□□□□ -1.59
CHD2-213ENST00000628118 ZNF22P17026 224 aaPredicted RBP5.14□□□□□ -1.59
CHD2-213ENST00000628118 SCXQ7RTU7 201 aa5.14□□□□□ -1.59
CHD2-213ENST00000628118 SPACA4Q8TDM5 124 aa5.14□□□□□ -1.59
CHD2-213ENST00000628118 MAP1LC3CQ9BXW4 147 aa5.14□□□□□ -1.59
CHD2-213ENST00000628118 TOMM7Q9P0U1 55 aa5.14□□□□□ -1.59
CHD2-213ENST00000628118 IGLV5-39A0A0G2JS06 123 aa5.13□□□□□ -1.59
CHD2-213ENST00000628118 C11orf86A6NJI1 115 aa5.13□□□□□ -1.59
CHD2-213ENST00000628118 NUPR1O60356 82 aa5.13□□□□□ -1.59
CHD2-213ENST00000628118 PTTG1IPP53801 180 aa5.13□□□□□ -1.59
CHD2-213ENST00000628118 TMEM170BQ5T4T1 132 aa5.13□□□□□ -1.59
CHD2-213ENST00000628118 CIRBP-AS1Q8TBR5 109 aa5.13□□□□□ -1.59
CHD2-213ENST00000628118 COX7B2Q8TF08 81 aa5.13□□□□□ -1.59
CHD2-213ENST00000628118 DPH3Q96FX2 82 aa5.13□□□□□ -1.59
CHD2-213ENST00000628118 KRTAP4-9Q9BYQ8 210 aa5.13□□□□□ -1.59
CHD2-213ENST00000628118 C6orf48Q9UBA6 75 aa5.13□□□□□ -1.59
CHD2-213ENST00000628118 SPINK8P0C7L1 97 aa5.12□□□□□ -1.59
CHD2-213ENST00000628118 PLNP26678 52 aa5.12□□□□□ -1.59
CHD2-213ENST00000628118 ODF1Q14990 250 aa5.12□□□□□ -1.59
CHD2-213ENST00000628118 UNQ6190/PRO20217Q6UXQ8 127 aa5.12□□□□□ -1.59
CHD2-213ENST00000628118 PLAC8Q9NZF1 115 aa5.12□□□□□ -1.59
CHD2-213ENST00000628118 A0A087WYN8 130 aa5.11□□□□□ -1.59
CHD2-213ENST00000628118 A0A096LNI7 61 aa5.11□□□□□ -1.59
CHD2-213ENST00000628118 IGKV2-24A0A0C4DH68 120 aa5.11□□□□□ -1.59
CHD2-213ENST00000628118 TMEM223A0PJW6 202 aa5.11□□□□□ -1.59
CHD2-213ENST00000628118 EPM2AB3EWF7 344 aa5.11□□□□□ -1.59
CHD2-213ENST00000628118 NDUFC2-KCTD14E9PQ53 114 aa5.11□□□□□ -1.59
CHD2-213ENST00000628118 PLA2G1BP04054 148 aaKnown RBP5.11□□□□□ -1.59
CHD2-213ENST00000628118 FABP4P15090 132 aa5.11□□□□□ -1.59
CHD2-213ENST00000628118 RPL18AQ02543 176 aaKnown RBP5.11□□□□□ -1.59
CHD2-213ENST00000628118 GAGE2BQ13066 116 aa5.11□□□□□ -1.59
CHD2-213ENST00000628118 MAJINQ3KP22 176 aa5.11□□□□□ -1.59
CHD2-213ENST00000628118 C10orf25Q5T742 122 aa5.11□□□□□ -1.59
CHD2-213ENST00000628118 DPM2O94777 84 aa5.1□□□□□ -1.59
CHD2-213ENST00000628118 CHTF8P0CG12 524 aa5.1□□□□□ -1.59
CHD2-213ENST00000628118 AKR1D1P51857 326 aa5.1□□□□□ -1.59
CHD2-213ENST00000628118 PET117Q6UWS5 81 aa5.1□□□□□ -1.59
CHD2-213ENST00000628118 C2orf82Q6UX34 121 aa5.1□□□□□ -1.59
CHD2-213ENST00000628118 STPG4Q8N801 248 aa5.1□□□□□ -1.59
CHD2-213ENST00000628118 KRTAP4-2Q9BYR5 136 aa5.1□□□□□ -1.59
CHD2-213ENST00000628118 H0Y8G0 127 aa5.09□□□□□ -1.59
CHD2-213ENST00000628118 SYS1-DBNDD2H3BUS1 97 aa5.09□□□□□ -1.59
CHD2-213ENST00000628118 PANO1I0J062 215 aa5.09□□□□□ -1.59
CHD2-213ENST00000628118 IGKCP01834 107 aa5.09□□□□□ -1.59
CHD2-213ENST00000628118 HERVK_113P61574 105 aa5.09□□□□□ -1.59
CHD2-213ENST00000628118 COX17Q14061 63 aa5.09□□□□□ -1.59
CHD2-213ENST00000628118 Q5VSD8 79 aa5.09□□□□□ -1.59
CHD2-213ENST00000628118 Q6ZRP5 223 aa5.09□□□□□ -1.59
CHD2-213ENST00000628118 C7orf33Q8WU49 177 aa5.09□□□□□ -1.59
CHD2-213ENST00000628118 LINC00587B1AMM8 73 aa5.08□□□□□ -1.6
CHD2-213ENST00000628118 SMR3BP02814 79 aaPredicted RBP5.08□□□□□ -1.6
CHD2-213ENST00000628118 S100A6P06703 90 aa5.08□□□□□ -1.6
CHD2-213ENST00000628118 HAMPP81172 84 aa5.08□□□□□ -1.6
CHD2-213ENST00000628118 PLEKHB2Q96CS7 222 aa5.08□□□□□ -1.6
CHD2-213ENST00000628118 FAT1Q14517 4588 aa5.07□□□□□ -1.6
CHD2-213ENST00000628118 C20orf202A1L168 122 aa5.07□□□□□ -1.6
CHD2-213ENST00000628118 LEPROTO15243 131 aa5.07□□□□□ -1.6
CHD2-213ENST00000628118 HERV-K104P63124 156 aa5.07□□□□□ -1.6
CHD2-213ENST00000628118 GAGE2EQ4V326 116 aa5.07□□□□□ -1.6
CHD2-213ENST00000628118 C9orf116Q5BN46 136 aaPredicted RBP5.07□□□□□ -1.6
CHD2-213ENST00000628118 LINC01545Q5VT33 79 aa5.07□□□□□ -1.6
CHD2-213ENST00000628118 GAGE2DQ9UEU5 116 aa5.07□□□□□ -1.6
CHD2-213ENST00000628118 S100A2P29034 98 aa5.06□□□□□ -1.6
CHD2-213ENST00000628118 NMUP48645 174 aa5.06□□□□□ -1.6
CHD2-213ENST00000628118 RPL37AP61513 92 aaKnown RBP5.06□□□□□ -1.6
CHD2-213ENST00000628118 ZNF625Q96I27 306 aaPredicted RBP5.06□□□□□ -1.6
CHD2-213ENST00000628118 VPS13BQ7Z7G8 4022 aa5.05□□□□□ -1.6
CHD2-213ENST00000628118 MYMXA0A1B0GTQ4 84 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 1784.2 ms