RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 NDUFA12Q9UI09 145 aa0.55□□□□□ -2.32
VBP1-204ENST00000625964 PRELID1Q9Y255 219 aa0.55□□□□□ -2.32
VBP1-204ENST00000625964 TRBV7-3A0A075B6L6 115 aa0.54□□□□□ -2.32
VBP1-204ENST00000625964 A0A0A6YYH2 397 aa0.54□□□□□ -2.32
VBP1-204ENST00000625964 IGHV1-58A0A0C4DH39 117 aa0.54□□□□□ -2.32
VBP1-204ENST00000625964 TRBV10-1A0A0K0K1A3 114 aa0.54□□□□□ -2.32
VBP1-204ENST00000625964 LOC100506127A0A0U1RQW1 187 aa0.54□□□□□ -2.32
VBP1-204ENST00000625964 IRGMA1A4Y4 181 aa0.54□□□□□ -2.32
VBP1-204ENST00000625964 C20orf202A1L168 122 aa0.54□□□□□ -2.32
VBP1-204ENST00000625964 A6NJ64 397 aa0.54□□□□□ -2.32
VBP1-204ENST00000625964 M0R381 172 aa0.54□□□□□ -2.32
VBP1-204ENST00000625964 NUPR1O60356 82 aa0.54□□□□□ -2.32
VBP1-204ENST00000625964 APOMO95445 188 aa0.54□□□□□ -2.32
VBP1-204ENST00000625964 SPINK1P00995 79 aa0.54□□□□□ -2.32
VBP1-204ENST00000625964 TYMSP04818 313 aa0.54□□□□□ -2.32
VBP1-204ENST00000625964 IL5P05113 134 aa0.54□□□□□ -2.32
VBP1-204ENST00000625964 IGLC2P0DOY2 106 aa0.54□□□□□ -2.32
VBP1-204ENST00000625964 BCL2P10415 239 aa0.54□□□□□ -2.32
VBP1-204ENST00000625964 MYL12AP19105 171 aa0.54□□□□□ -2.32
VBP1-204ENST00000625964 Q1T7F1 81 aa0.54□□□□□ -2.32
VBP1-204ENST00000625964 TMEM97Q5BJF2 176 aa0.54□□□□□ -2.32
VBP1-204ENST00000625964 PATE2Q6UY27 113 aa0.54□□□□□ -2.32
VBP1-204ENST00000625964 CYP2G1PQ6ZSU1 146 aa0.54□□□□□ -2.32
VBP1-204ENST00000625964 DEFB107AQ8IZN7 70 aa0.54□□□□□ -2.32
VBP1-204ENST00000625964 FAM19A2Q8N3H0 131 aa0.54□□□□□ -2.32
VBP1-204ENST00000625964 NUP35Q8NFH5 326 aa0.54□□□□□ -2.32
VBP1-204ENST00000625964 MBD3L1Q8WWY6 194 aa0.54□□□□□ -2.32
VBP1-204ENST00000625964 NPVFQ9HCQ7 196 aa0.54□□□□□ -2.32
VBP1-204ENST00000625964 UQCC1Q9NVA1 299 aa0.54□□□□□ -2.32
VBP1-204ENST00000625964 TRBV19A0A075B6N1 114 aa0.54□□□□□ -2.32
VBP1-204ENST00000625964 TRBV25-1A0A075B6N4 114 aa0.54□□□□□ -2.32
VBP1-204ENST00000625964 TRAV21A0A0B4J279 112 aa0.54□□□□□ -2.32
VBP1-204ENST00000625964 TRBV6-1A0A0K0K1D8 114 aa0.54□□□□□ -2.32
VBP1-204ENST00000625964 EFCAB10A6NFE3 127 aa0.54□□□□□ -2.32
VBP1-204ENST00000625964 IFITM5A6NNB3 132 aa0.54□□□□□ -2.32
VBP1-204ENST00000625964 BCE1O60756 84 aa0.54□□□□□ -2.32
VBP1-204ENST00000625964 PMP2P02689 132 aa0.54□□□□□ -2.32
VBP1-204ENST00000625964 S100A9P06702 114 aaKnown RBP0.54□□□□□ -2.32
VBP1-204ENST00000625964 RNASE3P12724 160 aaKnown RBP0.54□□□□□ -2.32
VBP1-204ENST00000625964 CSN1S1P47710 185 aa0.54□□□□□ -2.32
VBP1-204ENST00000625964 H2BFSP57053 126 aa0.54□□□□□ -2.32
VBP1-204ENST00000625964 RPS20P60866 119 aaKnown RBP0.54□□□□□ -2.32
VBP1-204ENST00000625964 S100A10P60903 97 aa0.54□□□□□ -2.32
VBP1-204ENST00000625964 RPL37P61927 97 aaKnown RBP0.54□□□□□ -2.32
VBP1-204ENST00000625964 RPS29P62273 56 aaKnown RBP0.54□□□□□ -2.32
VBP1-204ENST00000625964 AKR1C1Q04828 323 aa0.54□□□□□ -2.32
VBP1-204ENST00000625964 PDE6HQ13956 83 aa0.54□□□□□ -2.32
VBP1-204ENST00000625964 IQCJQ1A5X6 159 aa0.54□□□□□ -2.32
VBP1-204ENST00000625964 TMEM91Q6ZNR0 172 aa0.54□□□□□ -2.32
VBP1-204ENST00000625964 LINC00305Q7Z4B0 112 aa0.54□□□□□ -2.32
VBP1-204ENST00000625964 FAM19A5Q7Z5A7 132 aaPredicted RBP0.54□□□□□ -2.32
VBP1-204ENST00000625964 EXOC3-AS1Q8N2X6 119 aa0.54□□□□□ -2.32
VBP1-204ENST00000625964 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.54□□□□□ -2.32
VBP1-204ENST00000625964 OR5A1Q8NGJ0 315 aa0.54□□□□□ -2.32
VBP1-204ENST00000625964 STOML3Q8TAV4 291 aa0.54□□□□□ -2.32
VBP1-204ENST00000625964 ASB13Q8WXK3 278 aa0.54□□□□□ -2.32
VBP1-204ENST00000625964 DIRAS2Q96HU8 199 aa0.54□□□□□ -2.32
VBP1-204ENST00000625964 AQP10Q96PS8 301 aa0.54□□□□□ -2.32
VBP1-204ENST00000625964 TP53RKQ96S44 253 aa0.54□□□□□ -2.32
VBP1-204ENST00000625964 IMMP2LQ96T52 175 aa0.54□□□□□ -2.32
VBP1-204ENST00000625964 DERL1Q9BUN8 251 aa0.54□□□□□ -2.32
VBP1-204ENST00000625964 FXYD6Q9H0Q3 95 aa0.54□□□□□ -2.32
VBP1-204ENST00000625964 NAA60Q9H7X0 242 aa0.54□□□□□ -2.32
VBP1-204ENST00000625964 FKBP14Q9NWM8 211 aa0.54□□□□□ -2.32
VBP1-204ENST00000625964 TP73-AS1Q9UF72 201 aa0.54□□□□□ -2.32
VBP1-204ENST00000625964 LENEPQ9Y5L5 61 aa0.54□□□□□ -2.32
VBP1-204ENST00000625964 SYNE1Q8NF91 8797 aaKnown RBP0.53□□□□□ -2.32
VBP1-204ENST00000625964 IGHV1-24A0A0C4DH33 117 aa0.53□□□□□ -2.33
VBP1-204ENST00000625964 C3orf85A0A1B0GTC6 90 aa0.53□□□□□ -2.33
VBP1-204ENST00000625964 TCRBV3S1A0A5B6 114 aa0.53□□□□□ -2.33
VBP1-204ENST00000625964 C9orf92A6NGG3 77 aa0.53□□□□□ -2.33
VBP1-204ENST00000625964 PDCD5O14737 125 aa0.53□□□□□ -2.33
VBP1-204ENST00000625964 SULT1A3P0DMM9 295 aa0.53□□□□□ -2.33
VBP1-204ENST00000625964 SULT1A4P0DMN0 295 aa0.53□□□□□ -2.33
VBP1-204ENST00000625964 RAB4BP61018 213 aa0.53□□□□□ -2.33
VBP1-204ENST00000625964 SMAGPQ0VAQ4 97 aa0.53□□□□□ -2.33
VBP1-204ENST00000625964 FAM74A4Q5TZK3 123 aa0.53□□□□□ -2.33
VBP1-204ENST00000625964 C10orf113Q5VZT2 155 aa0.53□□□□□ -2.33
VBP1-204ENST00000625964 IZUMO2Q6UXV1 221 aa0.53□□□□□ -2.33
VBP1-204ENST00000625964 SPATA24Q86W54 205 aa0.53□□□□□ -2.33
VBP1-204ENST00000625964 TERB2Q8NHR7 220 aa0.53□□□□□ -2.33
VBP1-204ENST00000625964 ATP6V1G3Q96LB4 118 aa0.53□□□□□ -2.33
VBP1-204ENST00000625964 TMEM14CQ9P0S9 112 aa0.53□□□□□ -2.33
VBP1-204ENST00000625964 PAIP2BQ9ULR5 123 aaKnown RBP0.53□□□□□ -2.33
VBP1-204ENST00000625964 TRAV1-2A0A0B4J238 106 aa0.52□□□□□ -2.33
VBP1-204ENST00000625964 LOC100130705A0A1B0GUX0 176 aa0.52□□□□□ -2.33
VBP1-204ENST00000625964 H7C2G1 150 aa0.52□□□□□ -2.33
VBP1-204ENST00000625964 CCL25O15444 150 aa0.52□□□□□ -2.33
VBP1-204ENST00000625964 NBEAP1P0C6P0 100 aa0.52□□□□□ -2.33
VBP1-204ENST00000625964 LINC00614P0C842 121 aa0.52□□□□□ -2.33
VBP1-204ENST00000625964 IAPPP10997 89 aa0.52□□□□□ -2.33
VBP1-204ENST00000625964 S100A4P26447 101 aaKnown RBP0.52□□□□□ -2.33
VBP1-204ENST00000625964 ZNF80P51504 273 aaPredicted RBP0.52□□□□□ -2.33
VBP1-204ENST00000625964 SMCO1Q147U7 214 aa0.52□□□□□ -2.33
VBP1-204ENST00000625964 C12orf45Q8N5I9 185 aaPredicted RBP0.52□□□□□ -2.33
VBP1-204ENST00000625964 PLEKHB2Q96CS7 222 aa0.52□□□□□ -2.33
VBP1-204ENST00000625964 PACRGQ96M98 296 aaPredicted RBP0.52□□□□□ -2.33
VBP1-204ENST00000625964 CIB3Q96Q77 187 aaPredicted RBP0.52□□□□□ -2.33
VBP1-204ENST00000625964 TREM1Q9NP99 234 aa0.52□□□□□ -2.33
VBP1-204ENST00000625964 MRPL35Q9NZE8 188 aaKnown RBP0.52□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms