RNA–Protein interactions for RNA: ENST00000624953.1

CDKL5-208, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 567 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-208ENST00000624953 RPL23P62829 140 aaKnown RBP1.66□□□□□ -2.14
CDKL5-208ENST00000624953 TPRXLQ17RH7 258 aa1.66□□□□□ -2.14
CDKL5-208ENST00000624953 IQCJQ1A5X6 159 aa1.66□□□□□ -2.14
CDKL5-208ENST00000624953 C1orf137Q5JT78 98 aa1.66□□□□□ -2.14
CDKL5-208ENST00000624953 FAM74A1Q5RGS3 127 aa1.66□□□□□ -2.14
CDKL5-208ENST00000624953 COMMD7Q86VX2 200 aa1.66□□□□□ -2.14
CDKL5-208ENST00000624953 SVBPQ8N300 66 aa1.66□□□□□ -2.14
CDKL5-208ENST00000624953 C9orf62Q8N4C0 152 aa1.66□□□□□ -2.14
CDKL5-208ENST00000624953 OR5C1Q8NGR4 320 aa1.66□□□□□ -2.14
CDKL5-208ENST00000624953 PSMG3Q9BT73 122 aaPredicted RBP1.66□□□□□ -2.14
CDKL5-208ENST00000624953 WDR61Q9GZS3 305 aaKnown RBP1.66□□□□□ -2.14
CDKL5-208ENST00000624953 RPP21Q9H633 154 aaKnown RBP1.66□□□□□ -2.14
CDKL5-208ENST00000624953 SND1-IT1Q9HBX3 110 aa1.66□□□□□ -2.14
CDKL5-208ENST00000624953 BIN3Q9NQY0 253 aa1.66□□□□□ -2.14
CDKL5-208ENST00000624953 OTORQ9NRC9 128 aa1.66□□□□□ -2.14
CDKL5-208ENST00000624953 OR5AC2Q9NZP5 309 aa1.66□□□□□ -2.14
CDKL5-208ENST00000624953 ARL2-SNX15V9GYD0 113 aa1.66□□□□□ -2.14
CDKL5-208ENST00000624953 IGLV1-50A0A075B6I6 118 aa1.65□□□□□ -2.15
CDKL5-208ENST00000624953 TRAV1-1A0A0B4J248 108 aa1.65□□□□□ -2.15
CDKL5-208ENST00000624953 LINC00862A6NCI5 91 aa1.65□□□□□ -2.15
CDKL5-208ENST00000624953 B4DEV8 164 aa1.65□□□□□ -2.15
CDKL5-208ENST00000624953 M0R381 172 aa1.65□□□□□ -2.15
CDKL5-208ENST00000624953 PSPHP1O15172 72 aa1.65□□□□□ -2.15
CDKL5-208ENST00000624953 PDE6DO43924 150 aa1.65□□□□□ -2.15
CDKL5-208ENST00000624953 BCL2P10415 239 aa1.65□□□□□ -2.15
CDKL5-208ENST00000624953 SULT1A2P50226 295 aa1.65□□□□□ -2.15
CDKL5-208ENST00000624953 FLI1Q01543 452 aaPredicted RBP1.65□□□□□ -2.15
CDKL5-208ENST00000624953 PMVKQ15126 192 aa1.65□□□□□ -2.15
CDKL5-208ENST00000624953 OR10AG1Q8NH19 301 aa1.65□□□□□ -2.15
CDKL5-208ENST00000624953 GNB1LQ9BYB4 327 aa1.65□□□□□ -2.15
CDKL5-208ENST00000624953 SH3BGRL3Q9H299 93 aa1.65□□□□□ -2.15
CDKL5-208ENST00000624953 MANBALQ9NQG1 85 aa1.65□□□□□ -2.15
CDKL5-208ENST00000624953 TMEM167BQ9NRX6 74 aa1.65□□□□□ -2.15
CDKL5-208ENST00000624953 TMSB15BA0A087X1C1 80 aa1.64□□□□□ -2.15
CDKL5-208ENST00000624953 MUC21A0A140T8X8 626 aa1.64□□□□□ -2.15
CDKL5-208ENST00000624953 CTXND1A0A1B0GTU2 59 aa1.64□□□□□ -2.15
CDKL5-208ENST00000624953 NDUFC2-KCTD14E9PQ53 114 aa1.64□□□□□ -2.15
CDKL5-208ENST00000624953 TMEM250H0YL14 139 aa1.64□□□□□ -2.15
CDKL5-208ENST00000624953 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.64□□□□□ -2.15
CDKL5-208ENST00000624953 M0QY20 66 aa1.64□□□□□ -2.15
CDKL5-208ENST00000624953 SH2D1AO60880 128 aa1.64□□□□□ -2.15
CDKL5-208ENST00000624953 SIX6O95475 246 aa1.64□□□□□ -2.15
CDKL5-208ENST00000624953 CXorf1O96002 111 aa1.64□□□□□ -2.15
CDKL5-208ENST00000624953 TLX1NBP0CAT3 122 aa1.64□□□□□ -2.15
CDKL5-208ENST00000624953 ARL14EPLP0DKL9 152 aa1.64□□□□□ -2.15
CDKL5-208ENST00000624953 RAB4BP61018 213 aa1.64□□□□□ -2.15
CDKL5-208ENST00000624953 MEF2BQ02080 365 aaPredicted RBP1.64□□□□□ -2.15
CDKL5-208ENST00000624953 RHEBQ15382 184 aa1.64□□□□□ -2.15
CDKL5-208ENST00000624953 KRTAP13-2Q52LG2 175 aa1.64□□□□□ -2.15
CDKL5-208ENST00000624953 KHDC3LQ587J8 217 aa1.64□□□□□ -2.15
CDKL5-208ENST00000624953 C9orf116Q5BN46 136 aaPredicted RBP1.64□□□□□ -2.15
CDKL5-208ENST00000624953 FAM162BQ5T6X4 162 aa1.64□□□□□ -2.15
CDKL5-208ENST00000624953 Q86TA4 180 aa1.64□□□□□ -2.15
CDKL5-208ENST00000624953 FER1L6-AS1Q8NA97 138 aa1.64□□□□□ -2.15
CDKL5-208ENST00000624953 C5orf17Q8NAS9 161 aa1.64□□□□□ -2.15
CDKL5-208ENST00000624953 CMTM2Q8TAZ6 248 aa1.64□□□□□ -2.15
CDKL5-208ENST00000624953 DIRC1Q969H9 104 aa1.64□□□□□ -2.15
CDKL5-208ENST00000624953 SMIM12Q96EX1 92 aa1.64□□□□□ -2.15
CDKL5-208ENST00000624953 CARD19Q96LW7 228 aa1.64□□□□□ -2.15
CDKL5-208ENST00000624953 DERL1Q9BUN8 251 aa1.64□□□□□ -2.15
CDKL5-208ENST00000624953 SEC11CQ9BY50 192 aa1.64□□□□□ -2.15
CDKL5-208ENST00000624953 EIF5A2Q9GZV4 153 aaKnown RBP1.64□□□□□ -2.15
CDKL5-208ENST00000624953 PRO0628Q9UI54 55 aa1.64□□□□□ -2.15
CDKL5-208ENST00000624953 PKIGQ9Y2B9 76 aa1.64□□□□□ -2.15
CDKL5-208ENST00000624953 ZNF706Q9Y5V0 76 aaPredicted RBP1.64□□□□□ -2.15
CDKL5-208ENST00000624953 SYNE2Q8WXH0 6885 aaKnown RBP1.63□□□□□ -2.15
CDKL5-208ENST00000624953 TRBV25-1A0A075B6N4 114 aa1.63□□□□□ -2.15
CDKL5-208ENST00000624953 IGHV1-24A0A0C4DH33 117 aa1.63□□□□□ -2.15
CDKL5-208ENST00000624953 IGKV3OR2-268A0A0C4DH90 116 aa1.63□□□□□ -2.15
CDKL5-208ENST00000624953 LOC389332A0A1B0GUA5 103 aa1.63□□□□□ -2.15
CDKL5-208ENST00000624953 A0A1B0GVX0 72 aa1.63□□□□□ -2.15
CDKL5-208ENST00000624953 TMEM218A2RU14 115 aa1.63□□□□□ -2.15
CDKL5-208ENST00000624953 FABP5P3A8MUU1 101 aa1.63□□□□□ -2.15
CDKL5-208ENST00000624953 MT-ND6P03923 174 aa1.63□□□□□ -2.15
CDKL5-208ENST00000624953 GZMBP10144 247 aa1.63□□□□□ -2.15
CDKL5-208ENST00000624953 S100PP25815 95 aa1.63□□□□□ -2.15
CDKL5-208ENST00000624953 S100A4P26447 101 aaKnown RBP1.63□□□□□ -2.15
CDKL5-208ENST00000624953 ATP6V0CP27449 155 aa1.63□□□□□ -2.15
CDKL5-208ENST00000624953 ZNF56Q15929 161 aa1.63□□□□□ -2.15
CDKL5-208ENST00000624953 ASB16-AS1Q495Z4 193 aa1.63□□□□□ -2.15
CDKL5-208ENST00000624953 RPL7L1Q6DKI1 246 aaKnown RBP1.63□□□□□ -2.15
CDKL5-208ENST00000624953 ALKAL2Q6UX46 152 aa1.63□□□□□ -2.15
CDKL5-208ENST00000624953 NUP35Q8NFH5 326 aa1.63□□□□□ -2.15
CDKL5-208ENST00000624953 FAM213BQ8TBF2 198 aa1.63□□□□□ -2.15
CDKL5-208ENST00000624953 SFT2D1Q8WV19 159 aa1.63□□□□□ -2.15
CDKL5-208ENST00000624953 MBD3L1Q8WWY6 194 aa1.63□□□□□ -2.15
CDKL5-208ENST00000624953 HIST1H2BAQ96A08 127 aa1.63□□□□□ -2.15
CDKL5-208ENST00000624953 TMEM242Q9NWH2 141 aa1.63□□□□□ -2.15
CDKL5-208ENST00000624953 EPDR1Q9UM22 224 aa1.63□□□□□ -2.15
CDKL5-208ENST00000624953 CARHSP1Q9Y2V2 147 aaKnown RBP1.63□□□□□ -2.15
CDKL5-208ENST00000624953 PHLDA3Q9Y5J5 127 aa1.63□□□□□ -2.15
CDKL5-208ENST00000624953 MACF1Q9UPN3 7388 aaKnown RBP1.62□□□□□ -2.15
CDKL5-208ENST00000624953 IGLV4-69A0A075B6H9 119 aa1.62□□□□□ -2.15
CDKL5-208ENST00000624953 TRAV9-1A0A075B6T8 112 aa1.62□□□□□ -2.15
CDKL5-208ENST00000624953 A0A096LNJ9 63 aa1.62□□□□□ -2.15
CDKL5-208ENST00000624953 FAM236DA0A1B0GTK5 79 aa1.62□□□□□ -2.15
CDKL5-208ENST00000624953 A0A1W2PRE2 83 aa1.62□□□□□ -2.15
CDKL5-208ENST00000624953 F8W036 122 aa1.62□□□□□ -2.15
CDKL5-208ENST00000624953 MT-ND4LP03901 98 aa1.62□□□□□ -2.15
CDKL5-208ENST00000624953 S100A8P05109 93 aa1.62□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms