RNA–Protein interactions for RNA: ENST00000623364.3

CDKL5-204, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 3

Gene CDKL5, Length 483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-204ENST00000623364 RAB19A4D1S5 217 aa2.91□□□□□ -1.94
CDKL5-204ENST00000623364 LINC00862A6NCI5 91 aa2.91□□□□□ -1.94
CDKL5-204ENST00000623364 SMLR1H3BR10 107 aa2.91□□□□□ -1.94
CDKL5-204ENST00000623364 NCR2O95944 276 aa2.91□□□□□ -1.94
CDKL5-204ENST00000623364 APCSP02743 223 aa2.91□□□□□ -1.94
CDKL5-204ENST00000623364 ARL14EPLP0DKL9 152 aa2.91□□□□□ -1.94
CDKL5-204ENST00000623364 FLI1Q01543 452 aaPredicted RBP2.91□□□□□ -1.94
CDKL5-204ENST00000623364 C10orf91Q5T1B1 145 aa2.91□□□□□ -1.94
CDKL5-204ENST00000623364 AKR1C8PQ5T2L2 129 aa2.91□□□□□ -1.94
CDKL5-204ENST00000623364 KRTAP5-11Q6L8G4 156 aa2.91□□□□□ -1.94
CDKL5-204ENST00000623364 Q86TA4 180 aa2.91□□□□□ -1.94
CDKL5-204ENST00000623364 OR10AG1Q8NH19 301 aa2.91□□□□□ -1.94
CDKL5-204ENST00000623364 TIMM17AQ99595 171 aa2.91□□□□□ -1.94
CDKL5-204ENST00000623364 PSMG3Q9BT73 122 aaPredicted RBP2.91□□□□□ -1.94
CDKL5-204ENST00000623364 TMEM126AQ9H061 195 aa2.91□□□□□ -1.94
CDKL5-204ENST00000623364 NIT2Q9NQR4 276 aa2.91□□□□□ -1.94
CDKL5-204ENST00000623364 TRAV13-1A0A0B4J241 112 aa2.9□□□□□ -1.95
CDKL5-204ENST00000623364 PEA15Q15121 130 aa2.9□□□□□ -1.95
CDKL5-204ENST00000623364 SPANXN1Q5VSR9 72 aa2.9□□□□□ -1.95
CDKL5-204ENST00000623364 NKAPP1Q8N9T2 125 aa2.9□□□□□ -1.95
CDKL5-204ENST00000623364 AP1S3Q96PC3 154 aa2.9□□□□□ -1.95
CDKL5-204ENST00000623364 A0A1W2PPV4 95 aa2.89□□□□□ -1.95
CDKL5-204ENST00000623364 TMEM238C9JI98 176 aa2.89□□□□□ -1.95
CDKL5-204ENST00000623364 IFNA1P01562 189 aa2.89□□□□□ -1.95
CDKL5-204ENST00000623364 TAS2R45P59539 299 aa2.89□□□□□ -1.95
CDKL5-204ENST00000623364 IFITM2Q01629 132 aa2.89□□□□□ -1.95
CDKL5-204ENST00000623364 LINC00483Q53H64 154 aa2.89□□□□□ -1.95
CDKL5-204ENST00000623364 RPL7L1Q6DKI1 246 aaKnown RBP2.89□□□□□ -1.95
CDKL5-204ENST00000623364 C2orf82Q6UX34 121 aa2.89□□□□□ -1.95
CDKL5-204ENST00000623364 Q75L30 129 aa2.89□□□□□ -1.95
CDKL5-204ENST00000623364 FAM210AQ96ND0 272 aa2.89□□□□□ -1.95
CDKL5-204ENST00000623364 NKX6-2Q9C056 277 aaPredicted RBP2.89□□□□□ -1.95
CDKL5-204ENST00000623364 ACTR3CQ9C0K3 210 aaPredicted RBP2.89□□□□□ -1.95
CDKL5-204ENST00000623364 WDR61Q9GZS3 305 aaKnown RBP2.89□□□□□ -1.95
CDKL5-204ENST00000623364 A0A0G2JQZ4 141 aa2.88□□□□□ -1.95
CDKL5-204ENST00000623364 UBE2L5PA0A1B0GUS4 154 aa2.88□□□□□ -1.95
CDKL5-204ENST00000623364 IGSF23A1L1A6 192 aa2.88□□□□□ -1.95
CDKL5-204ENST00000623364 PRYO14603 147 aa2.88□□□□□ -1.95
CDKL5-204ENST00000623364 FOXA3P55318 350 aaPredicted RBP2.88□□□□□ -1.95
CDKL5-204ENST00000623364 SSTP61278 116 aa2.88□□□□□ -1.95
CDKL5-204ENST00000623364 ALKAL2Q6UX46 152 aa2.88□□□□□ -1.95
CDKL5-204ENST00000623364 MBD3L1Q8WWY6 194 aa2.88□□□□□ -1.95
CDKL5-204ENST00000623364 TCEAL7Q9BRU2 100 aa2.88□□□□□ -1.95
CDKL5-204ENST00000623364 MUC21A0A140T8X8 626 aa2.87□□□□□ -1.95
CDKL5-204ENST00000623364 SH2D1AO60880 128 aa2.87□□□□□ -1.95
CDKL5-204ENST00000623364 CXorf1O96002 111 aa2.87□□□□□ -1.95
CDKL5-204ENST00000623364 ATP6V0CP27449 155 aa2.87□□□□□ -1.95
CDKL5-204ENST00000623364 FAM74A3Q4VXF1 159 aa2.87□□□□□ -1.95
CDKL5-204ENST00000623364 KHDC3LQ587J8 217 aa2.87□□□□□ -1.95
CDKL5-204ENST00000623364 GAGE2AQ6NT46 116 aa2.87□□□□□ -1.95
CDKL5-204ENST00000623364 PQLC2Q6ZP29 291 aa2.87□□□□□ -1.95
CDKL5-204ENST00000623364 COMMD7Q86VX2 200 aa2.87□□□□□ -1.95
CDKL5-204ENST00000623364 SFT2D1Q8WV19 159 aa2.87□□□□□ -1.95
CDKL5-204ENST00000623364 NPCDR1Q9BY65 106 aa2.87□□□□□ -1.95
CDKL5-204ENST00000623364 SMIM3Q9BZL3 60 aa2.87□□□□□ -1.95
CDKL5-204ENST00000623364 EIF5A2Q9GZV4 153 aaKnown RBP2.87□□□□□ -1.95
CDKL5-204ENST00000623364 MANBALQ9NQG1 85 aa2.87□□□□□ -1.95
CDKL5-204ENST00000623364 TMEM167BQ9NRX6 74 aa2.87□□□□□ -1.95
CDKL5-204ENST00000623364 IGLV5-37A0A075B6J1 123 aa2.86□□□□□ -1.95
CDKL5-204ENST00000623364 CTXND1A0A1B0GTU2 59 aa2.86□□□□□ -1.95
CDKL5-204ENST00000623364 M0R378 163 aa2.86□□□□□ -1.95
CDKL5-204ENST00000623364 PDE6DO43924 150 aa2.86□□□□□ -1.95
CDKL5-204ENST00000623364 S100A9P06702 114 aaKnown RBP2.86□□□□□ -1.95
CDKL5-204ENST00000623364 FHITP49789 147 aa2.86□□□□□ -1.95
CDKL5-204ENST00000623364 C9orf153Q5TBE3 101 aa2.86□□□□□ -1.95
CDKL5-204ENST00000623364 MRPL52Q86TS9 123 aaKnown RBP2.86□□□□□ -1.95
CDKL5-204ENST00000623364 SVBPQ8N300 66 aa2.86□□□□□ -1.95
CDKL5-204ENST00000623364 C5orf17Q8NAS9 161 aa2.86□□□□□ -1.95
CDKL5-204ENST00000623364 MPLKIPQ8TAP9 179 aa2.86□□□□□ -1.95
CDKL5-204ENST00000623364 FAM213BQ8TBF2 198 aa2.86□□□□□ -1.95
CDKL5-204ENST00000623364 SEC11CQ9BY50 192 aa2.86□□□□□ -1.95
CDKL5-204ENST00000623364 LOC107984156A0A0G2JMH3 177 aa2.85□□□□□ -1.95
CDKL5-204ENST00000623364 TMEM218A2RU14 115 aa2.85□□□□□ -1.95
CDKL5-204ENST00000623364 PRSS47A8MTI9 375 aa2.85□□□□□ -1.95
CDKL5-204ENST00000623364 TMEM250H0YL14 139 aa2.85□□□□□ -1.95
CDKL5-204ENST00000623364 ATP6V1G1O75348 118 aa2.85□□□□□ -1.95
CDKL5-204ENST00000623364 SNAPINO95295 136 aa2.85□□□□□ -1.95
CDKL5-204ENST00000623364 KIAA0087Q14695 138 aa2.85□□□□□ -1.95
CDKL5-204ENST00000623364 ARL17AQ8IVW1 177 aa2.85□□□□□ -1.95
CDKL5-204ENST00000623364 SLC7A5P1Q8MH63 180 aa2.85□□□□□ -1.95
CDKL5-204ENST00000623364 MRAP2Q96G30 205 aa2.85□□□□□ -1.95
CDKL5-204ENST00000623364 A0A1W2PRE2 83 aa2.84□□□□□ -1.95
CDKL5-204ENST00000623364 MAP1LC3B2A6NCE7 125 aa2.84□□□□□ -1.95
CDKL5-204ENST00000623364 F8W036 122 aa2.84□□□□□ -1.95
CDKL5-204ENST00000623364 STAG3L2P0CL84 134 aa2.84□□□□□ -1.95
CDKL5-204ENST00000623364 STAG3L3P0CL85 134 aa2.84□□□□□ -1.95
CDKL5-204ENST00000623364 CDC34P49427 236 aaPredicted RBP2.84□□□□□ -1.95
CDKL5-204ENST00000623364 CRIP1P50238 77 aa2.84□□□□□ -1.95
CDKL5-204ENST00000623364 HRCT1Q6UXD1 115 aa2.84□□□□□ -1.95
CDKL5-204ENST00000623364 MAP1LC3BQ9GZQ8 125 aa2.84□□□□□ -1.95
CDKL5-204ENST00000623364 BIN3Q9NQY0 253 aa2.84□□□□□ -1.95
CDKL5-204ENST00000623364 IGHV3OR16-9A0A0B4J2B5 98 aa2.83□□□□□ -1.96
CDKL5-204ENST00000623364 PPP1R2P9O14990 202 aa2.83□□□□□ -1.96
CDKL5-204ENST00000623364 HRES1P13985 223 aa2.83□□□□□ -1.96
CDKL5-204ENST00000623364 PCP4P48539 62 aa2.83□□□□□ -1.96
CDKL5-204ENST00000623364 RHEBQ15382 184 aa2.83□□□□□ -1.96
CDKL5-204ENST00000623364 KRTAP19-8Q3LI54 63 aa2.83□□□□□ -1.96
CDKL5-204ENST00000623364 RNASE13Q5GAN3 156 aaKnown RBP2.83□□□□□ -1.96
CDKL5-204ENST00000623364 MTURNQ8N3F0 131 aa2.83□□□□□ -1.96
CDKL5-204ENST00000623364 HIST1H2BAQ96A08 127 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms