RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 NOTCH3Q9UM47 2321 aa9.86□□□□□ -0.83
LDB3-209ENST00000623056 J3QLI3 93 aa9.86□□□□□ -0.83
LDB3-209ENST00000623056 DSCR9P59020 149 aa9.86□□□□□ -0.83
LDB3-209ENST00000623056 A0A096LNT2 108 aa9.85□□□□□ -0.83
LDB3-209ENST00000623056 C11orf68Q9H3H3 251 aaKnown RBP9.85□□□□□ -0.83
LDB3-209ENST00000623056 MYO9AB2RTY4 2548 aa9.85□□□□□ -0.83
LDB3-209ENST00000623056 S100A7L2Q5SY68 101 aa9.85□□□□□ -0.83
LDB3-209ENST00000623056 WFDC9Q8NEX5 89 aa9.85□□□□□ -0.83
LDB3-209ENST00000623056 LINC00167Q96N53 147 aa9.85□□□□□ -0.83
LDB3-209ENST00000623056 TRGV2A0A075B6R0 118 aa9.84□□□□□ -0.83
LDB3-209ENST00000623056 FHL2Q14192 279 aa9.84□□□□□ -0.83
LDB3-209ENST00000623056 APCP25054 2843 aa9.84□□□□□ -0.83
LDB3-209ENST00000623056 HECTD1Q9ULT8 2610 aa9.84□□□□□ -0.83
LDB3-209ENST00000623056 CUBNO60494 3623 aa9.84□□□□□ -0.83
LDB3-209ENST00000623056 ZNF469Q96JG9 3925 aaPredicted RBP9.84□□□□□ -0.83
LDB3-209ENST00000623056 GHRHP01286 108 aa9.84□□□□□ -0.83
LDB3-209ENST00000623056 JMJD7-PLA2G4BH0Y9G9 81 aa9.83□□□□□ -0.84
LDB3-209ENST00000623056 ATP5EP2Q5VTU8 51 aa9.83□□□□□ -0.84
LDB3-209ENST00000623056 TRAV23DV6A0A075B6W5 121 aa9.83□□□□□ -0.84
LDB3-209ENST00000623056 TRBV6-8A0A0A6YYG3 113 aa9.83□□□□□ -0.84
LDB3-209ENST00000623056 FSHBP01225 129 aa9.83□□□□□ -0.84
LDB3-209ENST00000623056 C6orf226Q5I0X4 101 aa9.83□□□□□ -0.84
LDB3-209ENST00000623056 PLAC8L1A1L4L8 177 aa9.82□□□□□ -0.84
LDB3-209ENST00000623056 FAM19A1Q7Z5A9 133 aa9.82□□□□□ -0.84
LDB3-209ENST00000623056 MAST4O15021 2626 aa9.82□□□□□ -0.84
LDB3-209ENST00000623056 NANOS2P60321 138 aaKnown RBP9.82□□□□□ -0.84
LDB3-209ENST00000623056 Q8N814 137 aa9.82□□□□□ -0.84
LDB3-209ENST00000623056 TRGV4A0A0C4DH28 118 aa9.81□□□□□ -0.84
LDB3-209ENST00000623056 DEFB113Q30KQ7 82 aa9.81□□□□□ -0.84
LDB3-209ENST00000623056 ENHOQ6UWT2 76 aa9.81□□□□□ -0.84
LDB3-209ENST00000623056 TRAV25A0A0B4J276 109 aa9.81□□□□□ -0.84
LDB3-209ENST00000623056 LINC00959A0A1B0GUT2 108 aa9.81□□□□□ -0.84
LDB3-209ENST00000623056 C4orf26Q17RF5 130 aa9.81□□□□□ -0.84
LDB3-209ENST00000623056 WIPF1O43516 503 aa9.8□□□□□ -0.84
LDB3-209ENST00000623056 GIG44P09565 113 aaPredicted RBP9.8□□□□□ -0.84
LDB3-209ENST00000623056 Q5XG85 94 aa9.8□□□□□ -0.84
LDB3-209ENST00000623056 LYPD5Q6UWN5 251 aa9.8□□□□□ -0.84
LDB3-209ENST00000623056 TMEM86BQ8N661 226 aa9.8□□□□□ -0.84
LDB3-209ENST00000623056 C16orf74Q96GX8 76 aa9.8□□□□□ -0.84
LDB3-209ENST00000623056 WNK1Q9H4A3 2382 aa9.8□□□□□ -0.84
LDB3-209ENST00000623056 AKAP9Q99996 3911 aa9.8□□□□□ -0.84
LDB3-209ENST00000623056 CYSRT1A8MQ03 144 aa9.79□□□□□ -0.84
LDB3-209ENST00000623056 TMEM256-PLSCR3K7ERE1 68 aa9.79□□□□□ -0.84
LDB3-209ENST00000623056 PRR3P79522 188 aaKnown RBP9.79□□□□□ -0.84
LDB3-209ENST00000623056 NDUFC2O95298 119 aa9.78□□□□□ -0.84
LDB3-209ENST00000623056 IGHV4-31P0DP07 118 aa9.78□□□□□ -0.84
LDB3-209ENST00000623056 NDUFC2-KCTD14E9PQ53 114 aa9.78□□□□□ -0.84
LDB3-209ENST00000623056 TEX15Q9BXT5 2789 aa9.77□□□□□ -0.84
LDB3-209ENST00000623056 XCL1P47992 114 aa9.77□□□□□ -0.85
LDB3-209ENST00000623056 CR1P17927 2039 aa9.77□□□□□ -0.85
LDB3-209ENST00000623056 UBL5Q9BZL1 73 aa9.77□□□□□ -0.85
LDB3-209ENST00000623056 JMJD1CQ15652 2540 aa9.76□□□□□ -0.85
LDB3-209ENST00000623056 TRBV10-3A0A0K0K1G6 114 aa9.76□□□□□ -0.85
LDB3-209ENST00000623056 HRCT1Q6UXD1 115 aa9.76□□□□□ -0.85
LDB3-209ENST00000623056 Q8IZM0 81 aa9.76□□□□□ -0.85
LDB3-209ENST00000623056 C20orf197Q8N268 126 aa9.76□□□□□ -0.85
LDB3-209ENST00000623056 KRTAP1-3Q8IUG1 177 aa9.76□□□□□ -0.85
LDB3-209ENST00000623056 TLN2Q9Y4G6 2542 aa9.75□□□□□ -0.85
LDB3-209ENST00000623056 CCDC168Q8NDH2 2452 aa9.75□□□□□ -0.85
LDB3-209ENST00000623056 RNASE1P07998 156 aaKnown RBP9.75□□□□□ -0.85
LDB3-209ENST00000623056 A0A1W2PRX2 142 aa9.74□□□□□ -0.85
LDB3-209ENST00000623056 C11orf44Q8N8P7 122 aa9.74□□□□□ -0.85
LDB3-209ENST00000623056 WFDC10AQ9H1F0 79 aa9.74□□□□□ -0.85
LDB3-209ENST00000623056 ITPR3Q14573 2671 aa9.74□□□□□ -0.85
LDB3-209ENST00000623056 RPL35AP18077 110 aaKnown RBP9.73□□□□□ -0.85
LDB3-209ENST00000623056 CLPSL2Q6UWE3 100 aa9.72□□□□□ -0.85
LDB3-209ENST00000623056 WFDC11Q8NEX6 87 aa9.72□□□□□ -0.85
LDB3-209ENST00000623056 FAM236DA0A1B0GTK5 79 aa9.72□□□□□ -0.85
LDB3-209ENST00000623056 FAM236CP0DP71 79 aa9.72□□□□□ -0.85
LDB3-209ENST00000623056 C6orf99Q4VX62 202 aa9.71□□□□□ -0.85
LDB3-209ENST00000623056 CCL24O00175 119 aa9.71□□□□□ -0.86
LDB3-209ENST00000623056 Q6ZQT0 140 aa9.71□□□□□ -0.86
LDB3-209ENST00000623056 CSNK1G2-AS1Q8NCQ2 148 aa9.71□□□□□ -0.86
LDB3-209ENST00000623056 RBM3P98179 157 aaKnown RBP9.69□□□□□ -0.86
LDB3-209ENST00000623056 KIAA0087Q14695 138 aa9.69□□□□□ -0.86
LDB3-209ENST00000623056 Q8NDZ9 215 aa9.69□□□□□ -0.86
LDB3-209ENST00000623056 SONP18583 2426 aaKnown RBP9.69□□□□□ -0.86
LDB3-209ENST00000623056 FLNAP21333 2647 aaKnown RBP9.69□□□□□ -0.86
LDB3-209ENST00000623056 TRAV7A0A075B6U4 112 aa9.68□□□□□ -0.86
LDB3-209ENST00000623056 LINC00575Q6W349 94 aa9.68□□□□□ -0.86
LDB3-209ENST00000623056 ITPR2Q14571 2701 aa9.68□□□□□ -0.86
LDB3-209ENST00000623056 PDZD2O15018 2839 aa9.68□□□□□ -0.86
LDB3-209ENST00000623056 NIPBLQ6KC79 2804 aaeCLIP9.68□□□□□ -0.86
LDB3-209ENST00000623056 A0A1B0GUV1 79 aa9.68□□□□□ -0.86
LDB3-209ENST00000623056 H7BZZ5 65 aa9.68□□□□□ -0.86
LDB3-209ENST00000623056 M0R2N4 97 aa9.68□□□□□ -0.86
LDB3-209ENST00000623056 COX17Q14061 63 aa9.68□□□□□ -0.86
LDB3-209ENST00000623056 C9orf116Q5BN46 136 aaPredicted RBP9.68□□□□□ -0.86
LDB3-209ENST00000623056 LOC110117498A0A087WWA1 95 aa9.67□□□□□ -0.86
LDB3-209ENST00000623056 BCE1O60756 84 aa9.67□□□□□ -0.86
LDB3-209ENST00000623056 EPM2AB3EWF7 344 aa9.67□□□□□ -0.86
LDB3-209ENST00000623056 ZNF561-AS1K7EIQ3 104 aa9.67□□□□□ -0.86
LDB3-209ENST00000623056 GYPEP15421 78 aa9.67□□□□□ -0.86
LDB3-209ENST00000623056 LINC01547P58512 204 aaPredicted RBP9.67□□□□□ -0.86
LDB3-209ENST00000623056 DEFB130BP0DP73 79 aa9.66□□□□□ -0.86
LDB3-209ENST00000623056 DEFB130AP0DP74 79 aa9.66□□□□□ -0.86
LDB3-209ENST00000623056 CMC4P56277 68 aaPredicted RBP9.66□□□□□ -0.86
LDB3-209ENST00000623056 C19orf73Q9NVV2 129 aa9.66□□□□□ -0.86
LDB3-209ENST00000623056 LINC00482Q8N8I6 264 aa9.66□□□□□ -0.86
LDB3-209ENST00000623056 LAMTOR3Q9UHA4 124 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms