RNA–Protein interactions for RNA: ENST00000622972.3

LINC00963-215, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 444 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-215ENST00000622972 GVQW2A0A096LPI5 108 aaPredicted RBP3.74□□□□□ -1.81
LINC00963-215ENST00000622972 HBDP02042 147 aa3.74□□□□□ -1.81
LINC00963-215ENST00000622972 KIAA0087Q14695 138 aa3.74□□□□□ -1.81
LINC00963-215ENST00000622972 COA6Q5JTJ3 125 aaKnown RBP3.74□□□□□ -1.81
LINC00963-215ENST00000622972 CFAP161Q6P656 301 aa3.74□□□□□ -1.81
LINC00963-215ENST00000622972 CD164L2Q6UWJ8 174 aa3.74□□□□□ -1.81
LINC00963-215ENST00000622972 ERASQ7Z444 233 aa3.74□□□□□ -1.81
LINC00963-215ENST00000622972 C5orf38Q86SI9 138 aa3.74□□□□□ -1.81
LINC00963-215ENST00000622972 CHCHD1Q96BP2 118 aaKnown RBP3.74□□□□□ -1.81
LINC00963-215ENST00000622972 SCGB3A1Q96QR1 104 aa3.74□□□□□ -1.81
LINC00963-215ENST00000622972 CST9LQ9H4G1 147 aa3.74□□□□□ -1.81
LINC00963-215ENST00000622972 SRRM2Q9UQ35 2752 aaKnown RBP3.74□□□□□ -1.81
LINC00963-215ENST00000622972 IGLV5-45A0A087WSX0 123 aa3.73□□□□□ -1.81
LINC00963-215ENST00000622972 C11orf86A6NJI1 115 aa3.73□□□□□ -1.81
LINC00963-215ENST00000622972 RAB5BP61020 215 aa3.73□□□□□ -1.81
LINC00963-215ENST00000622972 C10orf25Q5T742 122 aa3.73□□□□□ -1.81
LINC00963-215ENST00000622972 SDIM1Q6ZPB5 146 aa3.73□□□□□ -1.81
LINC00963-215ENST00000622972 BAGE3Q86Y29 109 aa3.73□□□□□ -1.81
LINC00963-215ENST00000622972 TMEM18Q96B42 140 aa3.73□□□□□ -1.81
LINC00963-215ENST00000622972 CDKN2A-AS1Q9UH64 79 aa3.73□□□□□ -1.81
LINC00963-215ENST00000622972 A0A087WZ39 114 aa3.72□□□□□ -1.81
LINC00963-215ENST00000622972 IGKV2-24A0A0C4DH68 120 aa3.72□□□□□ -1.81
LINC00963-215ENST00000622972 C1orf196B1AJZ1 125 aa3.72□□□□□ -1.81
LINC00963-215ENST00000622972 SMIM1B2RUZ4 78 aa3.72□□□□□ -1.81
LINC00963-215ENST00000622972 CHTF8P0CG12 524 aa3.72□□□□□ -1.81
LINC00963-215ENST00000622972 IGLC3P0DOY3 106 aa3.72□□□□□ -1.81
LINC00963-215ENST00000622972 ZNF22P17026 224 aaPredicted RBP3.72□□□□□ -1.81
LINC00963-215ENST00000622972 KRTAP10-4P60372 401 aaPredicted RBP3.72□□□□□ -1.81
LINC00963-215ENST00000622972 CNBPP62633 177 aaKnown RBP3.72□□□□□ -1.81
LINC00963-215ENST00000622972 PMVKQ15126 192 aa3.72□□□□□ -1.81
LINC00963-215ENST00000622972 SS18Q15532 418 aa3.72□□□□□ -1.81
LINC00963-215ENST00000622972 MAJINQ3KP22 176 aa3.72□□□□□ -1.81
LINC00963-215ENST00000622972 TEX43Q6ZNM6 134 aa3.72□□□□□ -1.81
LINC00963-215ENST00000622972 C7orf33Q8WU49 177 aa3.72□□□□□ -1.81
LINC00963-215ENST00000622972 FAT3Q8TDW7 4589 aa3.71□□□□□ -1.82
LINC00963-215ENST00000622972 A0A087WYN8 130 aa3.71□□□□□ -1.82
LINC00963-215ENST00000622972 COX7A2LO14548 114 aa3.71□□□□□ -1.82
LINC00963-215ENST00000622972 HSBP1O75506 76 aa3.71□□□□□ -1.82
LINC00963-215ENST00000622972 HNRNPA3P51991 378 aaKnown RBP3.71□□□□□ -1.82
LINC00963-215ENST00000622972 C2orf82Q6UX34 121 aa3.71□□□□□ -1.82
LINC00963-215ENST00000622972 Q6ZRU5 148 aa3.71□□□□□ -1.82
LINC00963-215ENST00000622972 PMCHL2Q9BQD1 86 aa3.71□□□□□ -1.82
LINC00963-215ENST00000622972 VCX2Q9H322 139 aa3.71□□□□□ -1.82
LINC00963-215ENST00000622972 MRPL35Q9NZE8 188 aaKnown RBP3.71□□□□□ -1.82
LINC00963-215ENST00000622972 IGHV1-58A0A0C4DH39 117 aa3.7□□□□□ -1.82
LINC00963-215ENST00000622972 IGLV5-39A0A0G2JS06 123 aa3.7□□□□□ -1.82
LINC00963-215ENST00000622972 TINCRA0A1B0GVN0 87 aa3.7□□□□□ -1.82
LINC00963-215ENST00000622972 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.7□□□□□ -1.82
LINC00963-215ENST00000622972 SPINK8P0C7L1 97 aa3.7□□□□□ -1.82
LINC00963-215ENST00000622972 FABP4P15090 132 aa3.7□□□□□ -1.82
LINC00963-215ENST00000622972 NDUFA6P56556 154 aa3.7□□□□□ -1.82
LINC00963-215ENST00000622972 TSPEAR-AS2P59090 65 aa3.7□□□□□ -1.82
LINC00963-215ENST00000622972 SPAG11BQ08648 103 aa3.7□□□□□ -1.82
LINC00963-215ENST00000622972 UNQ6190/PRO20217Q6UXQ8 127 aa3.7□□□□□ -1.82
LINC00963-215ENST00000622972 KRTAP7-1Q8IUC3 87 aa3.7□□□□□ -1.82
LINC00963-215ENST00000622972 HIST3H2BBQ8N257 126 aa3.7□□□□□ -1.82
LINC00963-215ENST00000622972 SPACA4Q8TDM5 124 aa3.7□□□□□ -1.82
LINC00963-215ENST00000622972 ORAOV1Q8WV07 137 aa3.7□□□□□ -1.82
LINC00963-215ENST00000622972 IFI27L1Q96BM0 104 aa3.7□□□□□ -1.82
LINC00963-215ENST00000622972 C6orf48Q9UBA6 75 aa3.7□□□□□ -1.82
LINC00963-215ENST00000622972 MYCBP2O75592 4640 aa3.7□□□□□ -1.82
LINC00963-215ENST00000622972 A0A096LNI7 61 aa3.69□□□□□ -1.82
LINC00963-215ENST00000622972 TRAV12-1A0A0B4J245 112 aa3.69□□□□□ -1.82
LINC00963-215ENST00000622972 ATP5LO75964 103 aa3.69□□□□□ -1.82
LINC00963-215ENST00000622972 LEPROTL1O95214 131 aa3.69□□□□□ -1.82
LINC00963-215ENST00000622972 SMAGPQ0VAQ4 97 aa3.69□□□□□ -1.82
LINC00963-215ENST00000622972 CIRBPQ14011 172 aaKnown RBP3.69□□□□□ -1.82
LINC00963-215ENST00000622972 C9orf116Q5BN46 136 aaPredicted RBP3.69□□□□□ -1.82
LINC00963-215ENST00000622972 Q6ZN92 141 aa3.69□□□□□ -1.82
LINC00963-215ENST00000622972 STPG4Q8N801 248 aa3.69□□□□□ -1.82
LINC00963-215ENST00000622972 PKIGQ9Y2B9 76 aa3.69□□□□□ -1.82
LINC00963-215ENST00000622972 LRP1Q07954 4544 aaKnown RBP3.68□□□□□ -1.82
LINC00963-215ENST00000622972 F8VRH5 84 aa3.68□□□□□ -1.82
LINC00963-215ENST00000622972 H0Y8G0 127 aa3.68□□□□□ -1.82
LINC00963-215ENST00000622972 C3orf79P0CE67 100 aa3.68□□□□□ -1.82
LINC00963-215ENST00000622972 HERVK_113P63121 156 aa3.68□□□□□ -1.82
LINC00963-215ENST00000622972 LINC00469Q8N7U9 141 aa3.68□□□□□ -1.82
LINC00963-215ENST00000622972 OR10D4PQ8NGN7 298 aa3.68□□□□□ -1.82
LINC00963-215ENST00000622972 CARD19Q96LW7 228 aa3.68□□□□□ -1.82
LINC00963-215ENST00000622972 HIST1H2BLQ99880 126 aa3.68□□□□□ -1.82
LINC00963-215ENST00000622972 C2orf88Q9BSF0 95 aa3.68□□□□□ -1.82
LINC00963-215ENST00000622972 PLAC8Q9NZF1 115 aa3.68□□□□□ -1.82
LINC00963-215ENST00000622972 CHTOPQ9Y3Y2 248 aaKnown RBP3.68□□□□□ -1.82
LINC00963-215ENST00000622972 TMEM223A0PJW6 202 aa3.67□□□□□ -1.82
LINC00963-215ENST00000622972 LINC01549A6NIU2 74 aa3.67□□□□□ -1.82
LINC00963-215ENST00000622972 SYS1-DBNDD2H3BUS1 97 aa3.67□□□□□ -1.82
LINC00963-215ENST00000622972 G0S2P27469 103 aa3.67□□□□□ -1.82
LINC00963-215ENST00000622972 SYCNQ0VAF6 134 aa3.67□□□□□ -1.82
LINC00963-215ENST00000622972 KRTAP11-1Q8IUC1 163 aa3.67□□□□□ -1.82
LINC00963-215ENST00000622972 LINC01561Q8N1V8 128 aa3.67□□□□□ -1.82
LINC00963-215ENST00000622972 Q8NDZ9 215 aa3.67□□□□□ -1.82
LINC00963-215ENST00000622972 C2orf48Q96LS8 159 aa3.67□□□□□ -1.82
LINC00963-215ENST00000622972 LINC00474Q9P2X8 69 aa3.67□□□□□ -1.82
LINC00963-215ENST00000622972 FAM168BA1KXE4 195 aa3.66□□□□□ -1.82
LINC00963-215ENST00000622972 C5orf52A6NGY3 159 aa3.66□□□□□ -1.82
LINC00963-215ENST00000622972 PRYO14603 147 aa3.66□□□□□ -1.82
LINC00963-215ENST00000622972 SNRPEP62304 92 aaKnown RBP3.66□□□□□ -1.82
LINC00963-215ENST00000622972 GAGE2BQ13066 116 aa3.66□□□□□ -1.82
LINC00963-215ENST00000622972 PAPPA-AS1Q5QFB9 102 aa3.66□□□□□ -1.82
LINC00963-215ENST00000622972 LINC01545Q5VT33 79 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms