RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 IGKV2D-26A0A0A0MRZ7 120 aa6.3□□□□□ -1.4
HDAC9-229ENST00000622668 BVES-AS1Q5T3Y7 98 aa6.3□□□□□ -1.4
HDAC9-229ENST00000622668 C9orf116Q5BN46 136 aaPredicted RBP6.3□□□□□ -1.4
HDAC9-229ENST00000622668 PYY3Q5JQD4 70 aa6.3□□□□□ -1.4
HDAC9-229ENST00000622668 CSNK1G2-AS1Q8NCQ2 148 aa6.3□□□□□ -1.4
HDAC9-229ENST00000622668 PLAC8L1A1L4L8 177 aa6.3□□□□□ -1.4
HDAC9-229ENST00000622668 A4D1N5 150 aa6.29□□□□□ -1.4
HDAC9-229ENST00000622668 E9PLD3 99 aa6.29□□□□□ -1.4
HDAC9-229ENST00000622668 MRPS36P82909 103 aaKnown RBP6.29□□□□□ -1.4
HDAC9-229ENST00000622668 A0A1B0GUV1 79 aa6.29□□□□□ -1.4
HDAC9-229ENST00000622668 COX8AP10176 69 aa6.29□□□□□ -1.4
HDAC9-229ENST00000622668 C1orf137Q5JT78 98 aa6.29□□□□□ -1.4
HDAC9-229ENST00000622668 GAGE2AQ6NT46 116 aa6.29□□□□□ -1.4
HDAC9-229ENST00000622668 Q9UF83 564 aa6.29□□□□□ -1.4
HDAC9-229ENST00000622668 IBA57-AS1B1ANH7 110 aa6.29□□□□□ -1.4
HDAC9-229ENST00000622668 LINC00242Q5T6M2 205 aa6.29□□□□□ -1.4
HDAC9-229ENST00000622668 NF1P21359 2839 aa6.28□□□□□ -1.4
HDAC9-229ENST00000622668 DCHS2Q6V1P9 2916 aa6.28□□□□□ -1.4
HDAC9-229ENST00000622668 Q8N3U1 123 aa6.28□□□□□ -1.4
HDAC9-229ENST00000622668 C9JAW5 83 aa6.28□□□□□ -1.4
HDAC9-229ENST00000622668 COX7BP24311 80 aa6.28□□□□□ -1.4
HDAC9-229ENST00000622668 CASC10Q5T4H9 136 aa6.28□□□□□ -1.4
HDAC9-229ENST00000622668 LINC01545Q5VT33 79 aa6.28□□□□□ -1.4
HDAC9-229ENST00000622668 COX8CQ7Z4L0 72 aa6.28□□□□□ -1.4
HDAC9-229ENST00000622668 NPSP0C0P6 89 aa6.28□□□□□ -1.4
HDAC9-229ENST00000622668 GIG44P09565 113 aaPredicted RBP6.28□□□□□ -1.4
HDAC9-229ENST00000622668 PTH2Q96A98 100 aa6.28□□□□□ -1.4
HDAC9-229ENST00000622668 DSCR8Q96T75 97 aa6.28□□□□□ -1.4
HDAC9-229ENST00000622668 IGLC3P0DOY3 106 aa6.27□□□□□ -1.41
HDAC9-229ENST00000622668 XGP55808 180 aa6.27□□□□□ -1.41
HDAC9-229ENST00000622668 RTL8CO15255 209 aa6.27□□□□□ -1.41
HDAC9-229ENST00000622668 FAM19A4Q96LR4 140 aa6.27□□□□□ -1.41
HDAC9-229ENST00000622668 SPANXCQ9NY87 97 aa6.27□□□□□ -1.41
HDAC9-229ENST00000622668 J3QL48 77 aa6.26□□□□□ -1.41
HDAC9-229ENST00000622668 MRPL52Q86TS9 123 aaKnown RBP6.26□□□□□ -1.41
HDAC9-229ENST00000622668 Q8IZM0 81 aa6.26□□□□□ -1.41
HDAC9-229ENST00000622668 DNAH10OSP0CZ25 163 aa6.26□□□□□ -1.41
HDAC9-229ENST00000622668 Q6ZVH6 145 aa6.26□□□□□ -1.41
HDAC9-229ENST00000622668 RPL28P46779 137 aaKnown RBP6.25□□□□□ -1.41
HDAC9-229ENST00000622668 LINC00476Q8WZB0 136 aa6.25□□□□□ -1.41
HDAC9-229ENST00000622668 A0A0J9YXY3 114 aa6.25□□□□□ -1.41
HDAC9-229ENST00000622668 NTM-AS1Q6ZSK4 140 aa6.25□□□□□ -1.41
HDAC9-229ENST00000622668 FUSP35637 526 aaKnown RBP eCLIP6.25□□□□□ -1.41
HDAC9-229ENST00000622668 Q6ZRU5 148 aa6.25□□□□□ -1.41
HDAC9-229ENST00000622668 hADV29S1A0JD25 119 aa6.25□□□□□ -1.41
HDAC9-229ENST00000622668 CFC1BP0CG36 223 aa6.25□□□□□ -1.41
HDAC9-229ENST00000622668 CFC1P0CG37 223 aa6.25□□□□□ -1.41
HDAC9-229ENST00000622668 K7ERJ3 54 aa6.24□□□□□ -1.41
HDAC9-229ENST00000622668 KIF25-AS1Q9Y6Z4 181 aa6.24□□□□□ -1.41
HDAC9-229ENST00000622668 IGLV9-49A0A0B4J1Y8 123 aa6.23□□□□□ -1.41
HDAC9-229ENST00000622668 TRBV30A0A0K0K1B3 111 aa6.23□□□□□ -1.41
HDAC9-229ENST00000622668 TMEM223A0PJW6 202 aa6.23□□□□□ -1.41
HDAC9-229ENST00000622668 HAMPP81172 84 aa6.23□□□□□ -1.41
HDAC9-229ENST00000622668 ORMDL1Q9P0S3 153 aa6.23□□□□□ -1.41
HDAC9-229ENST00000622668 H0YGX0 51 aa6.23□□□□□ -1.41
HDAC9-229ENST00000622668 NDUFS5O43920 106 aa6.23□□□□□ -1.41
HDAC9-229ENST00000622668 KRTAP21-3Q3LHN1 58 aa6.23□□□□□ -1.41
HDAC9-229ENST00000622668 CEND1Q8N111 149 aa6.23□□□□□ -1.41
HDAC9-229ENST00000622668 M0R378 163 aa6.23□□□□□ -1.41
HDAC9-229ENST00000622668 MTURNQ8N3F0 131 aa6.23□□□□□ -1.41
HDAC9-229ENST00000622668 WIPF1O43516 503 aa6.22□□□□□ -1.41
HDAC9-229ENST00000622668 SMR3BP02814 79 aaPredicted RBP6.22□□□□□ -1.41
HDAC9-229ENST00000622668 C6orf99Q4VX62 202 aa6.22□□□□□ -1.41
HDAC9-229ENST00000622668 CSDC2Q9Y534 153 aaKnown RBP6.22□□□□□ -1.41
HDAC9-229ENST00000622668 NDUFC2-KCTD14E9PQ53 114 aa6.22□□□□□ -1.41
HDAC9-229ENST00000622668 SPINK6Q6UWN8 80 aa6.22□□□□□ -1.41
HDAC9-229ENST00000622668 APLNQ9ULZ1 77 aa6.22□□□□□ -1.41
HDAC9-229ENST00000622668 RELNP78509 3460 aa6.22□□□□□ -1.41
HDAC9-229ENST00000622668 TRACP01848 142 aa6.22□□□□□ -1.41
HDAC9-229ENST00000622668 LINC00336Q6ZUF6 198 aa6.22□□□□□ -1.41
HDAC9-229ENST00000622668 ZNF706Q9Y5V0 76 aaPredicted RBP6.22□□□□□ -1.41
HDAC9-229ENST00000622668 IGIPA6NJ69 53 aa6.22□□□□□ -1.41
HDAC9-229ENST00000622668 COA6Q5JTJ3 125 aaKnown RBP6.22□□□□□ -1.41
HDAC9-229ENST00000622668 HRCT1Q6UXD1 115 aa6.22□□□□□ -1.41
HDAC9-229ENST00000622668 SPANXB1Q9NS25 103 aaPredicted RBP6.22□□□□□ -1.41
HDAC9-229ENST00000622668 K7ERU9 68 aa6.21□□□□□ -1.41
HDAC9-229ENST00000622668 C2orf48Q96LS8 159 aa6.21□□□□□ -1.42
HDAC9-229ENST00000622668 TRAV23DV6A0A075B6W5 121 aa6.2□□□□□ -1.42
HDAC9-229ENST00000622668 SMIM1B2RUZ4 78 aa6.2□□□□□ -1.42
HDAC9-229ENST00000622668 HIST1H4AP62805 103 aaKnown RBP6.2□□□□□ -1.42
HDAC9-229ENST00000622668 SPANXDQ9BXN6 97 aa6.2□□□□□ -1.42
HDAC9-229ENST00000622668 MXRA5Q9NR99 2828 aa6.2□□□□□ -1.42
HDAC9-229ENST00000622668 LINC00308Q8TCZ7 52 aa6.2□□□□□ -1.42
HDAC9-229ENST00000622668 LAMA5O15230 3695 aa6.19□□□□□ -1.42
HDAC9-229ENST00000622668 ANKRD29Q8N6D5 301 aa6.19□□□□□ -1.42
HDAC9-229ENST00000622668 SIGMAR1Q99720 223 aa6.19□□□□□ -1.42
HDAC9-229ENST00000622668 NDUFB1O75438 58 aa6.19□□□□□ -1.42
HDAC9-229ENST00000622668 A8MTW9 85 aa6.19□□□□□ -1.42
HDAC9-229ENST00000622668 CHTF8P0CG12 524 aa6.19□□□□□ -1.42
HDAC9-229ENST00000622668 BAALC-AS2P0C853 105 aa6.18□□□□□ -1.42
HDAC9-229ENST00000622668 H3BMG7 143 aa6.18□□□□□ -1.42
HDAC9-229ENST00000622668 PLA2G1BP04054 148 aaKnown RBP6.18□□□□□ -1.42
HDAC9-229ENST00000622668 CIRBP-AS1Q8TBR5 109 aa6.18□□□□□ -1.42
HDAC9-229ENST00000622668 ASPMQ8IZT6 3477 aa6.18□□□□□ -1.42
HDAC9-229ENST00000622668 INAFM2P0DMQ5 153 aa6.18□□□□□ -1.42
HDAC9-229ENST00000622668 ENHOQ6UWT2 76 aa6.17□□□□□ -1.42
HDAC9-229ENST00000622668 TRBV20-1A0A075B6N2 111 aa6.17□□□□□ -1.42
HDAC9-229ENST00000622668 MRPL55Q7Z7F7 128 aaKnown RBP6.17□□□□□ -1.42
HDAC9-229ENST00000622668 COX17Q14061 63 aa6.17□□□□□ -1.42
HDAC9-229ENST00000622668 PRR3P79522 188 aaKnown RBP6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms