RNA–Protein interactions for RNA: ENST00000622209.4

PMPCA-212, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

TSL 1 (best)

Gene PMPCA, Length 1,013 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-212ENST00000622209 A0A096LNI7 61 aa13.35□□□□□ -0.27
PMPCA-212ENST00000622209 IGKV2-24A0A0C4DH68 120 aa13.35□□□□□ -0.27
PMPCA-212ENST00000622209 PRSS2P07478 247 aa13.35□□□□□ -0.27
PMPCA-212ENST00000622209 UNQ6190/PRO20217Q6UXQ8 127 aa13.35□□□□□ -0.27
PMPCA-212ENST00000622209 UBR4Q5T4S7 5183 aa13.35□□□□□ -0.27
PMPCA-212ENST00000622209 A0A087WYN8 130 aa13.34□□□□□ -0.27
PMPCA-212ENST00000622209 IGLC3P0DOY3 106 aa13.34□□□□□ -0.27
PMPCA-212ENST00000622209 MAJINQ3KP22 176 aa13.34□□□□□ -0.27
PMPCA-212ENST00000622209 Q8IZM0 81 aa13.34□□□□□ -0.27
PMPCA-212ENST00000622209 SERF1AO75920 110 aa13.33□□□□□ -0.28
PMPCA-212ENST00000622209 C6orf226Q5I0X4 101 aa13.33□□□□□ -0.28
PMPCA-212ENST00000622209 C10orf25Q5T742 122 aa13.33□□□□□ -0.28
PMPCA-212ENST00000622209 FAM19A2Q8N3H0 131 aa13.33□□□□□ -0.28
PMPCA-212ENST00000622209 IFI27L1Q96BM0 104 aa13.33□□□□□ -0.28
PMPCA-212ENST00000622209 PLAC8Q9NZF1 115 aa13.33□□□□□ -0.28
PMPCA-212ENST00000622209 TOMM7Q9P0U1 55 aa13.33□□□□□ -0.28
PMPCA-212ENST00000622209 TRBV30A0A0K0K1B3 111 aa13.31□□□□□ -0.28
PMPCA-212ENST00000622209 SMIM1B2RUZ4 78 aa13.31□□□□□ -0.28
PMPCA-212ENST00000622209 H3BRM9 83 aa13.31□□□□□ -0.28
PMPCA-212ENST00000622209 S100A1P23297 94 aa13.31□□□□□ -0.28
PMPCA-212ENST00000622209 PTTG1IPP53801 180 aa13.31□□□□□ -0.28
PMPCA-212ENST00000622209 LINC00310P59036 64 aa13.31□□□□□ -0.28
PMPCA-212ENST00000622209 C6orf48Q9UBA6 75 aa13.31□□□□□ -0.28
PMPCA-212ENST00000622209 TRAV12-1A0A0B4J245 112 aa13.3□□□□□ -0.28
PMPCA-212ENST00000622209 TLX1NBP0CAT3 122 aa13.3□□□□□ -0.28
PMPCA-212ENST00000622209 CKS1BP61024 79 aa13.3□□□□□ -0.28
PMPCA-212ENST00000622209 GAGE2BQ13066 116 aa13.3□□□□□ -0.28
PMPCA-212ENST00000622209 C2orf82Q6UX34 121 aa13.3□□□□□ -0.28
PMPCA-212ENST00000622209 STPG4Q8N801 248 aa13.3□□□□□ -0.28
PMPCA-212ENST00000622209 PLA2G2DQ9UNK4 145 aa13.29□□□□□ -0.28
PMPCA-212ENST00000622209 CHTOPQ9Y3Y2 248 aaKnown RBP13.28□□□□□ -0.28
PMPCA-212ENST00000622209 NUPR1O60356 82 aa13.27□□□□□ -0.29
PMPCA-212ENST00000622209 LEPROTL1O95214 131 aa13.27□□□□□ -0.29
PMPCA-212ENST00000622209 SPINK8P0C7L1 97 aa13.27□□□□□ -0.29
PMPCA-212ENST00000622209 CXCL5P42830 114 aa13.27□□□□□ -0.29
PMPCA-212ENST00000622209 RPL18AQ02543 176 aaKnown RBP13.27□□□□□ -0.29
PMPCA-212ENST00000622209 HIST1H2BKO60814 126 aa13.26□□□□□ -0.29
PMPCA-212ENST00000622209 HIST1H2BJP06899 126 aa13.26□□□□□ -0.29
PMPCA-212ENST00000622209 ZNF22P17026 224 aaPredicted RBP13.26□□□□□ -0.29
PMPCA-212ENST00000622209 HIST1H2BOP23527 126 aa13.26□□□□□ -0.29
PMPCA-212ENST00000622209 HIST1H2BBP33778 126 aa13.26□□□□□ -0.29
PMPCA-212ENST00000622209 HIST1H2BDP58876 126 aa13.26□□□□□ -0.29
PMPCA-212ENST00000622209 HIST1H2BCP62807 126 aa13.26□□□□□ -0.29
PMPCA-212ENST00000622209 HIST2H2BEQ16778 126 aa13.26□□□□□ -0.29
PMPCA-212ENST00000622209 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.26□□□□□ -0.29
PMPCA-212ENST00000622209 COX7B2Q8TF08 81 aa13.26□□□□□ -0.29
PMPCA-212ENST00000622209 HIST1H2BHQ93079 126 aa13.26□□□□□ -0.29
PMPCA-212ENST00000622209 HIST1H2BNQ99877 126 aa13.26□□□□□ -0.29
PMPCA-212ENST00000622209 HIST1H2BMQ99879 126 aa13.26□□□□□ -0.29
PMPCA-212ENST00000622209 F8VRH5 84 aa13.25□□□□□ -0.29
PMPCA-212ENST00000622209 C11orf86A6NJI1 115 aa13.24□□□□□ -0.29
PMPCA-212ENST00000622209 Q6ZRP5 223 aa13.24□□□□□ -0.29
PMPCA-212ENST00000622209 HSPB8Q9UJY1 196 aa13.24□□□□□ -0.29
PMPCA-212ENST00000622209 IGLV5-39A0A0G2JS06 123 aa13.23□□□□□ -0.29
PMPCA-212ENST00000622209 ATP6V1G1O75348 118 aa13.23□□□□□ -0.29
PMPCA-212ENST00000622209 NDUFC2-KCTD14E9PQ53 114 aa13.22□□□□□ -0.29
PMPCA-212ENST00000622209 TMEM170BQ5T4T1 132 aa13.22□□□□□ -0.29
PMPCA-212ENST00000622209 MT1HL1P0DM35 61 aa13.21□□□□□ -0.29
PMPCA-212ENST00000622209 C9orf116Q5BN46 136 aaPredicted RBP13.21□□□□□ -0.29
PMPCA-212ENST00000622209 C7orf33Q8WU49 177 aa13.21□□□□□ -0.29
PMPCA-212ENST00000622209 FABP4P15090 132 aa13.2□□□□□ -0.3
PMPCA-212ENST00000622209 A0A1W2PNN7 141 aa13.19□□□□□ -0.3
PMPCA-212ENST00000622209 GAGE2EQ4V326 116 aa13.18□□□□□ -0.3
PMPCA-212ENST00000622209 GAGE2DQ9UEU5 116 aa13.18□□□□□ -0.3
PMPCA-212ENST00000622209 ODF1Q14990 250 aa13.17□□□□□ -0.3
PMPCA-212ENST00000622209 H0Y8G0 127 aa13.16□□□□□ -0.3
PMPCA-212ENST00000622209 TMEM223A0PJW6 202 aa13.15□□□□□ -0.3
PMPCA-212ENST00000622209 COA6Q5JTJ3 125 aaKnown RBP13.14□□□□□ -0.31
PMPCA-212ENST00000622209 MAP1LC3CQ9BXW4 147 aa13.14□□□□□ -0.31
PMPCA-212ENST00000622209 SFTA2Q6UW10 78 aa13.13□□□□□ -0.31
PMPCA-212ENST00000622209 PLNP26678 52 aa13.12□□□□□ -0.31
PMPCA-212ENST00000622209 C9orf129Q5T035 196 aaKnown RBP13.11□□□□□ -0.31
PMPCA-212ENST00000622209 FAM168BA1KXE4 195 aa13.1□□□□□ -0.31
PMPCA-212ENST00000622209 TNXBP22105 4242 aa13.09□□□□□ -0.31
PMPCA-212ENST00000622209 DPM2O94777 84 aa13.09□□□□□ -0.31
PMPCA-212ENST00000622209 FAM19A5Q7Z5A7 132 aaPredicted RBP13.08□□□□□ -0.32
PMPCA-212ENST00000622209 PRR3P79522 188 aaKnown RBP13.07□□□□□ -0.32
PMPCA-212ENST00000622209 PHF5AQ7RTV0 110 aaKnown RBP13.07□□□□□ -0.32
PMPCA-212ENST00000622209 ZNF625Q96I27 306 aaPredicted RBP13.07□□□□□ -0.32
PMPCA-212ENST00000622209 XAGE1AQ9HD64 81 aa13.07□□□□□ -0.32
PMPCA-212ENST00000622209 SYS1-DBNDD2H3BUS1 97 aa13.06□□□□□ -0.32
PMPCA-212ENST00000622209 IGKCP01834 107 aa13.06□□□□□ -0.32
PMPCA-212ENST00000622209 COX17Q14061 63 aa13.06□□□□□ -0.32
PMPCA-212ENST00000622209 KRTAP7-1Q8IUC3 87 aa13.06□□□□□ -0.32
PMPCA-212ENST00000622209 PMCHL2Q9BQD1 86 aa13.05□□□□□ -0.32
PMPCA-212ENST00000622209 ERG28Q9UKR5 140 aa13.05□□□□□ -0.32
PMPCA-212ENST00000622209 M0QXV9 152 aa13.03□□□□□ -0.32
PMPCA-212ENST00000622209 PFN2P35080 140 aa13.03□□□□□ -0.32
PMPCA-212ENST00000622209 LEPROTO15243 131 aa13.02□□□□□ -0.33
PMPCA-212ENST00000622209 HERVK_113P61574 105 aa13.02□□□□□ -0.33
PMPCA-212ENST00000622209 PET117Q6UWS5 81 aa13.02□□□□□ -0.33
PMPCA-212ENST00000622209 PLEKHB2Q96CS7 222 aa13.01□□□□□ -0.33
PMPCA-212ENST00000622209 LINC01600Q96MT4 127 aa13.01□□□□□ -0.33
PMPCA-212ENST00000622209 HERV-K104P63124 156 aa13□□□□□ -0.33
PMPCA-212ENST00000622209 LINC01545Q5VT33 79 aa13□□□□□ -0.33
PMPCA-212ENST00000622209 PSORS1C2Q9UIG4 136 aa13□□□□□ -0.33
PMPCA-212ENST00000622209 C22orf24Q9Y442 160 aa13□□□□□ -0.33
PMPCA-212ENST00000622209 NDUFA12Q9UI09 145 aa12.99□□□□□ -0.33
PMPCA-212ENST00000622209 MYMXA0A1B0GTQ4 84 aa12.98□□□□□ -0.33
PMPCA-212ENST00000622209 C3orf79P0CE67 100 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms