RNA–Protein interactions for RNA: ENST00000622186.4

SLC6A6-210, Transcript of solute carrier family 6 member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A6-210ENST00000622186 EXPH5Q8NEV8 1989 aa8.62□□□□□ -1.03
SLC6A6-210ENST00000622186 Q6ZRP5 223 aa8.62□□□□□ -1.03
SLC6A6-210ENST00000622186 TANC2Q9HCD6 1990 aa8.62□□□□□ -1.03
SLC6A6-210ENST00000622186 Q8N3U1 123 aa8.62□□□□□ -1.03
SLC6A6-210ENST00000622186 VWA8A3KMH1 1905 aa8.62□□□□□ -1.03
SLC6A6-210ENST00000622186 Q8N6K4 173 aa8.61□□□□□ -1.03
SLC6A6-210ENST00000622186 C6orf48Q9UBA6 75 aa8.61□□□□□ -1.03
SLC6A6-210ENST00000622186 BRWD1-AS2P59051 145 aa8.6□□□□□ -1.03
SLC6A6-210ENST00000622186 SIP14410 1827 aa8.6□□□□□ -1.03
SLC6A6-210ENST00000622186 A0A087WVE0 104 aa8.6□□□□□ -1.03
SLC6A6-210ENST00000622186 SMIM1B2RUZ4 78 aa8.6□□□□□ -1.03
SLC6A6-210ENST00000622186 POLR2KP53803 58 aaKnown RBP8.6□□□□□ -1.03
SLC6A6-210ENST00000622186 C11orf21Q9P2W6 132 aa8.6□□□□□ -1.03
SLC6A6-210ENST00000622186 NLRC5Q86WI3 1866 aa8.59□□□□□ -1.03
SLC6A6-210ENST00000622186 GOLGB1Q14789 3259 aaKnown RBP8.59□□□□□ -1.03
SLC6A6-210ENST00000622186 FREM1Q5H8C1 2179 aa8.59□□□□□ -1.03
SLC6A6-210ENST00000622186 TP73-AS1Q9UF72 201 aa8.59□□□□□ -1.03
SLC6A6-210ENST00000622186 C2orf16Q68DN1 1984 aa8.58□□□□□ -1.04
SLC6A6-210ENST00000622186 LINC00694P0DN24 101 aa8.58□□□□□ -1.04
SLC6A6-210ENST00000622186 EIF4EBP1Q13541 118 aaPredicted RBP8.58□□□□□ -1.04
SLC6A6-210ENST00000622186 SPATA3Q8NHX4 192 aa8.58□□□□□ -1.04
SLC6A6-210ENST00000622186 CCDC179H3BU77 68 aa8.58□□□□□ -1.04
SLC6A6-210ENST00000622186 PRR14LQ5THK1 2151 aa8.57□□□□□ -1.04
SLC6A6-210ENST00000622186 DOPEY1Q5JWR5 2465 aa8.57□□□□□ -1.04
SLC6A6-210ENST00000622186 A8MTW9 85 aa8.57□□□□□ -1.04
SLC6A6-210ENST00000622186 PHF5AQ7RTV0 110 aaKnown RBP8.57□□□□□ -1.04
SLC6A6-210ENST00000622186 SHANK1Q9Y566 2161 aa8.56□□□□□ -1.04
SLC6A6-210ENST00000622186 PTPN13Q12923 2485 aa8.56□□□□□ -1.04
SLC6A6-210ENST00000622186 SIPA1L1O43166 1804 aa8.56□□□□□ -1.04
SLC6A6-210ENST00000622186 MED12LQ86YW9 2145 aa8.56□□□□□ -1.04
SLC6A6-210ENST00000622186 CDSNQ15517 529 aa8.55□□□□□ -1.04
SLC6A6-210ENST00000622186 SSBP3-AS1Q7Z2R9 100 aa8.55□□□□□ -1.04
SLC6A6-210ENST00000622186 TP53AIP1Q9HCN2 124 aa8.55□□□□□ -1.04
SLC6A6-210ENST00000622186 Q8NBF4 154 aa8.55□□□□□ -1.04
SLC6A6-210ENST00000622186 IGLV5-37A0A075B6J1 123 aa8.54□□□□□ -1.04
SLC6A6-210ENST00000622186 KIF25-AS1Q9Y6Z4 181 aa8.54□□□□□ -1.04
SLC6A6-210ENST00000622186 LINC00315P59091 139 aa8.54□□□□□ -1.04
SLC6A6-210ENST00000622186 KRTAP24-1Q3LI83 254 aa8.54□□□□□ -1.04
SLC6A6-210ENST00000622186 OBSL1O75147 1896 aa8.53□□□□□ -1.04
SLC6A6-210ENST00000622186 NBDYA0A0U1RRE5 68 aa8.52□□□□□ -1.05
SLC6A6-210ENST00000622186 A0A1B0GUV1 79 aa8.52□□□□□ -1.05
SLC6A6-210ENST00000622186 SMIM29Q86T20 159 aa8.52□□□□□ -1.05
SLC6A6-210ENST00000622186 RBM12B-AS1Q9P1G2 102 aa8.52□□□□□ -1.05
SLC6A6-210ENST00000622186 SRCAPQ6ZRS2 3230 aa8.52□□□□□ -1.05
SLC6A6-210ENST00000622186 LINC00167Q96N53 147 aa8.51□□□□□ -1.05
SLC6A6-210ENST00000622186 PLXNA2O75051 1894 aa8.51□□□□□ -1.05
SLC6A6-210ENST00000622186 TMEM254Q8TBM7 123 aa8.51□□□□□ -1.05
SLC6A6-210ENST00000622186 FAM19A4Q96LR4 140 aa8.51□□□□□ -1.05
SLC6A6-210ENST00000622186 GAS8-AS1O95177 125 aa8.5□□□□□ -1.05
SLC6A6-210ENST00000622186 HIVEP3Q5T1R4 2406 aa8.5□□□□□ -1.05
SLC6A6-210ENST00000622186 IGLV6-57P01721 117 aa8.49□□□□□ -1.05
SLC6A6-210ENST00000622186 TANC1Q9C0D5 1861 aa8.49□□□□□ -1.05
SLC6A6-210ENST00000622186 EPM2AB3EWF7 344 aa8.49□□□□□ -1.05
SLC6A6-210ENST00000622186 CRIPTQ9P021 101 aa8.49□□□□□ -1.05
SLC6A6-210ENST00000622186 IGIPA6NJ69 53 aa8.48□□□□□ -1.05
SLC6A6-210ENST00000622186 Q6ZSN1 163 aa8.48□□□□□ -1.05
SLC6A6-210ENST00000622186 C11orf1Q9H5F2 150 aa8.48□□□□□ -1.05
SLC6A6-210ENST00000622186 CSPG4Q6UVK1 2322 aa8.48□□□□□ -1.05
SLC6A6-210ENST00000622186 CCDC168Q8NDH2 2452 aa8.47□□□□□ -1.05
SLC6A6-210ENST00000622186 ZNF106Q9H2Y7 1883 aaKnown RBP8.47□□□□□ -1.05
SLC6A6-210ENST00000622186 ZNF575Q86XF7 245 aa8.47□□□□□ -1.05
SLC6A6-210ENST00000622186 CSNK1G2-AS1Q8NCQ2 148 aa8.47□□□□□ -1.05
SLC6A6-210ENST00000622186 COL5A1P20908 1838 aaPredicted RBP8.47□□□□□ -1.05
SLC6A6-210ENST00000622186 SPG11Q96JI7 2443 aa8.47□□□□□ -1.05
SLC6A6-210ENST00000622186 TET2Q6N021 2002 aaPredicted RBP8.46□□□□□ -1.05
SLC6A6-210ENST00000622186 NUP210Q8TEM1 1887 aaPredicted RBP8.46□□□□□ -1.05
SLC6A6-210ENST00000622186 TRAV22A0A0B4J277 110 aa8.45□□□□□ -1.06
SLC6A6-210ENST00000622186 LINC01561Q8N1V8 128 aa8.45□□□□□ -1.06
SLC6A6-210ENST00000622186 ZNF295-AS1Q8N0V1 137 aa8.45□□□□□ -1.06
SLC6A6-210ENST00000622186 ATG2AQ2TAZ0 1938 aa8.45□□□□□ -1.06
SLC6A6-210ENST00000622186 RAI1Q7Z5J4 1906 aaPredicted RBP8.44□□□□□ -1.06
SLC6A6-210ENST00000622186 ARHGAP21Q5T5U3 1957 aa8.44□□□□□ -1.06
SLC6A6-210ENST00000622186 ADAMTSL4-AS1Q5T5F5 129 aa8.43□□□□□ -1.06
SLC6A6-210ENST00000622186 ACACBO00763 2458 aa8.42□□□□□ -1.06
SLC6A6-210ENST00000622186 C8orf87E5RJ46 101 aa8.42□□□□□ -1.06
SLC6A6-210ENST00000622186 LINC00304Q8N9R0 145 aa8.42□□□□□ -1.06
SLC6A6-210ENST00000622186 CUL9Q8IWT3 2517 aa8.42□□□□□ -1.06
SLC6A6-210ENST00000622186 A0A0D9SG42 100 aa8.41□□□□□ -1.06
SLC6A6-210ENST00000622186 EP400Q96L91 3159 aa8.4□□□□□ -1.06
SLC6A6-210ENST00000622186 TECTAO75443 2155 aa8.4□□□□□ -1.06
SLC6A6-210ENST00000622186 TM2D3Q9BRN9 247 aa8.4□□□□□ -1.06
SLC6A6-210ENST00000622186 ZNF580Q9UK33 172 aa8.4□□□□□ -1.07
SLC6A6-210ENST00000622186 KIAA1549Q9HCM3 1950 aa8.4□□□□□ -1.07
SLC6A6-210ENST00000622186 C9orf129Q5T035 196 aaKnown RBP8.39□□□□□ -1.07
SLC6A6-210ENST00000622186 TSPEAR-AS2P59090 65 aa8.39□□□□□ -1.07
SLC6A6-210ENST00000622186 CXCL6P80162 114 aa8.39□□□□□ -1.07
SLC6A6-210ENST00000622186 LINC00476Q8WZB0 136 aa8.38□□□□□ -1.07
SLC6A6-210ENST00000622186 LINC01600Q96MT4 127 aa8.38□□□□□ -1.07
SLC6A6-210ENST00000622186 AMELXQ99217 191 aa8.38□□□□□ -1.07
SLC6A6-210ENST00000622186 BCE1O60756 84 aa8.38□□□□□ -1.07
SLC6A6-210ENST00000622186 Q6ZPA2 131 aa8.38□□□□□ -1.07
SLC6A6-210ENST00000622186 C2orf91Q6ZV80 131 aa8.38□□□□□ -1.07
SLC6A6-210ENST00000622186 BDP1A6H8Y1 2624 aa8.38□□□□□ -1.07
SLC6A6-210ENST00000622186 OBSCN-AS1Q96MR7 158 aa8.37□□□□□ -1.07
SLC6A6-210ENST00000622186 ST20-AS1Q8NBB2 130 aa8.37□□□□□ -1.07
SLC6A6-210ENST00000622186 IGLV5-39A0A0G2JS06 123 aa8.37□□□□□ -1.07
SLC6A6-210ENST00000622186 COL4A3Q01955 1670 aa8.37□□□□□ -1.07
SLC6A6-210ENST00000622186 TTC28Q96AY4 2481 aa8.37□□□□□ -1.07
SLC6A6-210ENST00000622186 ANAPC1Q9H1A4 1944 aa8.37□□□□□ -1.07
SLC6A6-210ENST00000622186 ABCA2Q9BZC7 2435 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms