RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 DEFB135Q30KP9 77 aa6.51□□□□□ -1.37
PDPN-212ENST00000621990 TRAV8-4A0A0B4J246 113 aa6.5□□□□□ -1.37
PDPN-212ENST00000621990 IGHV4-28A0A0C4DH34 117 aa6.5□□□□□ -1.37
PDPN-212ENST00000621990 CRPP02741 224 aa6.5□□□□□ -1.37
PDPN-212ENST00000621990 Q8NAQ8 132 aa6.5□□□□□ -1.37
PDPN-212ENST00000621990 A0A1B0GV72 72 aa6.5□□□□□ -1.37
PDPN-212ENST00000621990 MIFP14174 115 aa6.5□□□□□ -1.37
PDPN-212ENST00000621990 LINC00158P58513 81 aa6.5□□□□□ -1.37
PDPN-212ENST00000621990 XCL1P47992 114 aa6.49□□□□□ -1.37
PDPN-212ENST00000621990 WFDC9Q8NEX5 89 aa6.49□□□□□ -1.37
PDPN-212ENST00000621990 FAM218AQ96MZ4 157 aa6.49□□□□□ -1.37
PDPN-212ENST00000621990 NOTCH2Q04721 2471 aa6.49□□□□□ -1.37
PDPN-212ENST00000621990 HIVEP1P15822 2718 aa6.49□□□□□ -1.37
PDPN-212ENST00000621990 C6orf226Q5I0X4 101 aa6.48□□□□□ -1.37
PDPN-212ENST00000621990 CD164L2Q6UWJ8 174 aa6.48□□□□□ -1.37
PDPN-212ENST00000621990 C22orf24Q9Y442 160 aa6.48□□□□□ -1.37
PDPN-212ENST00000621990 TEP1Q99973 2627 aaKnown RBP6.48□□□□□ -1.37
PDPN-212ENST00000621990 DAD1P61803 113 aa6.48□□□□□ -1.37
PDPN-212ENST00000621990 MRPL23Q16540 153 aaKnown RBP6.48□□□□□ -1.37
PDPN-212ENST00000621990 A0A096LPF7 62 aa6.47□□□□□ -1.37
PDPN-212ENST00000621990 DEFB4AO15263 64 aa6.47□□□□□ -1.37
PDPN-212ENST00000621990 ATP5G1P05496 136 aa6.47□□□□□ -1.37
PDPN-212ENST00000621990 KIAA0087Q14695 138 aa6.47□□□□□ -1.37
PDPN-212ENST00000621990 LINC00269Q8N2A0 174 aa6.47□□□□□ -1.37
PDPN-212ENST00000621990 SMIM11BQ8TCY0 68 aa6.47□□□□□ -1.37
PDPN-212ENST00000621990 CELA1Q9UNI1 258 aa6.47□□□□□ -1.37
PDPN-212ENST00000621990 PFN2P35080 140 aa6.47□□□□□ -1.37
PDPN-212ENST00000621990 CKS1BP61024 79 aa6.46□□□□□ -1.38
PDPN-212ENST00000621990 COX17Q14061 63 aa6.46□□□□□ -1.38
PDPN-212ENST00000621990 Q6Q795 121 aa6.46□□□□□ -1.38
PDPN-212ENST00000621990 SNCGO76070 127 aa6.46□□□□□ -1.38
PDPN-212ENST00000621990 CXCL5P42830 114 aa6.46□□□□□ -1.38
PDPN-212ENST00000621990 CLPSL2Q6UWE3 100 aa6.46□□□□□ -1.38
PDPN-212ENST00000621990 ATRQ13535 2644 aa6.45□□□□□ -1.38
PDPN-212ENST00000621990 H0YGX0 51 aa6.45□□□□□ -1.38
PDPN-212ENST00000621990 BAALC-AS2P0C853 105 aa6.45□□□□□ -1.38
PDPN-212ENST00000621990 SPART-AS1P0CW21 52 aa6.45□□□□□ -1.38
PDPN-212ENST00000621990 REG3AQ06141 175 aa6.45□□□□□ -1.38
PDPN-212ENST00000621990 CHCHD10Q8WYQ3 142 aaPredicted RBP6.45□□□□□ -1.38
PDPN-212ENST00000621990 ACYP1P07311 99 aa6.45□□□□□ -1.38
PDPN-212ENST00000621990 IGHV4-30-4P0DP06 118 aa6.45□□□□□ -1.38
PDPN-212ENST00000621990 Q8N3U1 123 aa6.44□□□□□ -1.38
PDPN-212ENST00000621990 ANGP03950 147 aaKnown RBP6.44□□□□□ -1.38
PDPN-212ENST00000621990 LELP1Q5T871 98 aa6.44□□□□□ -1.38
PDPN-212ENST00000621990 C11orf68Q9H3H3 251 aaKnown RBP6.44□□□□□ -1.38
PDPN-212ENST00000621990 NDUFC2O95298 119 aa6.43□□□□□ -1.38
PDPN-212ENST00000621990 C15orf53Q8NAA6 179 aa6.43□□□□□ -1.38
PDPN-212ENST00000621990 ANK2Q01484 3957 aa6.43□□□□□ -1.38
PDPN-212ENST00000621990 A0A087WYN8 130 aa6.43□□□□□ -1.38
PDPN-212ENST00000621990 SDIM1Q6ZPB5 146 aa6.43□□□□□ -1.38
PDPN-212ENST00000621990 PRR34Q9NV39 138 aa6.43□□□□□ -1.38
PDPN-212ENST00000621990 CMYA5Q8N3K9 4069 aa6.43□□□□□ -1.38
PDPN-212ENST00000621990 MALP21145 153 aa6.42□□□□□ -1.38
PDPN-212ENST00000621990 GAGE2BQ13066 116 aa6.42□□□□□ -1.38
PDPN-212ENST00000621990 GAGE2EQ4V326 116 aa6.42□□□□□ -1.38
PDPN-212ENST00000621990 GAGE2DQ9UEU5 116 aa6.42□□□□□ -1.38
PDPN-212ENST00000621990 Q9HAA7 133 aa6.42□□□□□ -1.38
PDPN-212ENST00000621990 KLK5Q9Y337 293 aaPredicted RBP6.42□□□□□ -1.38
PDPN-212ENST00000621990 OBSCN-AS1Q96MR7 158 aa6.41□□□□□ -1.38
PDPN-212ENST00000621990 INAFM2P0DMQ5 153 aa6.41□□□□□ -1.38
PDPN-212ENST00000621990 NANOS2P60321 138 aaKnown RBP6.41□□□□□ -1.38
PDPN-212ENST00000621990 MUC7Q8TAX7 377 aa6.41□□□□□ -1.38
PDPN-212ENST00000621990 IGLV10-54A0A075B6I4 117 aa6.41□□□□□ -1.38
PDPN-212ENST00000621990 TRBV7-7A0A0K0K1E9 115 aa6.41□□□□□ -1.38
PDPN-212ENST00000621990 DNAL4O96015 105 aa6.4□□□□□ -1.38
PDPN-212ENST00000621990 DNAH3Q8TD57 4116 aa6.4□□□□□ -1.39
PDPN-212ENST00000621990 LINC00167Q96N53 147 aa6.4□□□□□ -1.39
PDPN-212ENST00000621990 H3BNG1 76 aa6.39□□□□□ -1.39
PDPN-212ENST00000621990 TTC32Q5I0X7 151 aa6.39□□□□□ -1.39
PDPN-212ENST00000621990 OR13C6PQ8NH95 151 aa6.39□□□□□ -1.39
PDPN-212ENST00000621990 A0A0J9YWU9 116 aa6.39□□□□□ -1.39
PDPN-212ENST00000621990 A0A1B0GX51 115 aa6.39□□□□□ -1.39
PDPN-212ENST00000621990 NHLRC4P0CG21 123 aaPredicted RBP6.39□□□□□ -1.39
PDPN-212ENST00000621990 NDUFV3P56181 108 aaKnown RBP6.39□□□□□ -1.39
PDPN-212ENST00000621990 LECT2O14960 151 aa6.38□□□□□ -1.39
PDPN-212ENST00000621990 LYPD5Q6UWN5 251 aa6.38□□□□□ -1.39
PDPN-212ENST00000621990 ENHOQ6UWT2 76 aa6.38□□□□□ -1.39
PDPN-212ENST00000621990 ANAPC13Q9BS18 74 aa6.38□□□□□ -1.39
PDPN-212ENST00000621990 HTN3P15516 51 aa6.38□□□□□ -1.39
PDPN-212ENST00000621990 SMCR5Q8TEV8 140 aa6.38□□□□□ -1.39
PDPN-212ENST00000621990 TMEM126AQ9H061 195 aa6.38□□□□□ -1.39
PDPN-212ENST00000621990 GVQW2A0A096LPI5 108 aaPredicted RBP6.37□□□□□ -1.39
PDPN-212ENST00000621990 C9orf116Q5BN46 136 aaPredicted RBP6.37□□□□□ -1.39
PDPN-212ENST00000621990 IMUPQ9GZP8 106 aa6.37□□□□□ -1.39
PDPN-212ENST00000621990 PRR3P79522 188 aaKnown RBP6.37□□□□□ -1.39
PDPN-212ENST00000621990 SPAG11BQ08648 103 aa6.37□□□□□ -1.39
PDPN-212ENST00000621990 LINC00643Q86TS7 51 aa6.37□□□□□ -1.39
PDPN-212ENST00000621990 Q8NDZ9 215 aa6.37□□□□□ -1.39
PDPN-212ENST00000621990 KRTAP10-11P60412 298 aa6.36□□□□□ -1.39
PDPN-212ENST00000621990 EGFEM1PQ0D2K5 195 aa6.36□□□□□ -1.39
PDPN-212ENST00000621990 C9orf129Q5T035 196 aaKnown RBP6.36□□□□□ -1.39
PDPN-212ENST00000621990 C10orf25Q5T742 122 aa6.36□□□□□ -1.39
PDPN-212ENST00000621990 KLK12Q9UKR0 248 aa6.36□□□□□ -1.39
PDPN-212ENST00000621990 UNQ6190/PRO20217Q6UXQ8 127 aa6.35□□□□□ -1.39
PDPN-212ENST00000621990 C6orf223Q8N319 242 aa6.35□□□□□ -1.39
PDPN-212ENST00000621990 CYSRT1A8MQ03 144 aa6.35□□□□□ -1.39
PDPN-212ENST00000621990 Q8N814 137 aa6.35□□□□□ -1.39
PDPN-212ENST00000621990 ORMDL1Q9P0S3 153 aa6.35□□□□□ -1.39
PDPN-212ENST00000621990 GAGE2AQ6NT46 116 aa6.34□□□□□ -1.4
PDPN-212ENST00000621990 PKD1L1Q8TDX9 2849 aa6.34□□□□□ -1.4
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