RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 SND1-IT1Q9HBX3 110 aa5.01□□□□□ -1.61
SRGAP3-213ENST00000618999 MAP6D1Q9H9H5 199 aa5.01□□□□□ -1.61
SRGAP3-213ENST00000618999 J3KT08 172 aa5□□□□□ -1.61
SRGAP3-213ENST00000618999 K7EQD1 137 aa5□□□□□ -1.61
SRGAP3-213ENST00000618999 DEFB121Q5J5C9 76 aa5□□□□□ -1.61
SRGAP3-213ENST00000618999 LINC00242Q5T6M2 205 aa5□□□□□ -1.61
SRGAP3-213ENST00000618999 Q6ZSN1 163 aa5□□□□□ -1.61
SRGAP3-213ENST00000618999 NACAE9PAV3 2078 aa5□□□□□ -1.61
SRGAP3-213ENST00000618999 TRGV4A0A0C4DH28 118 aa5□□□□□ -1.61
SRGAP3-213ENST00000618999 RS1O15537 224 aa5□□□□□ -1.61
SRGAP3-213ENST00000618999 BEAN1Q3B7T3 259 aa5□□□□□ -1.61
SRGAP3-213ENST00000618999 CUBNO60494 3623 aa5□□□□□ -1.61
SRGAP3-213ENST00000618999 COX6A2Q02221 97 aa5□□□□□ -1.61
SRGAP3-213ENST00000618999 RBMY1FQ15415 496 aaKnown RBP5□□□□□ -1.61
SRGAP3-213ENST00000618999 CD164L2Q6UWJ8 174 aa5□□□□□ -1.61
SRGAP3-213ENST00000618999 MIR7-3HGQ8N6C7 128 aa5□□□□□ -1.61
SRGAP3-213ENST00000618999 TRBV10-1A0A0K0K1A3 114 aa4.99□□□□□ -1.61
SRGAP3-213ENST00000618999 SMIM1B2RUZ4 78 aa4.99□□□□□ -1.61
SRGAP3-213ENST00000618999 H0YGX0 51 aa4.99□□□□□ -1.61
SRGAP3-213ENST00000618999 PFN2P35080 140 aa4.99□□□□□ -1.61
SRGAP3-213ENST00000618999 HIST1H4AP62805 103 aaKnown RBP4.99□□□□□ -1.61
SRGAP3-213ENST00000618999 COX7B2Q8TF08 81 aa4.99□□□□□ -1.61
SRGAP3-213ENST00000618999 Q9UF83 564 aa4.99□□□□□ -1.61
SRGAP3-213ENST00000618999 MAST4O15021 2626 aa4.99□□□□□ -1.61
SRGAP3-213ENST00000618999 A0A0U1RQV1 116 aa4.99□□□□□ -1.61
SRGAP3-213ENST00000618999 CXCL5P42830 114 aa4.99□□□□□ -1.61
SRGAP3-213ENST00000618999 IGLV5-45A0A087WSX0 123 aa4.98□□□□□ -1.61
SRGAP3-213ENST00000618999 C6orf226Q5I0X4 101 aa4.98□□□□□ -1.61
SRGAP3-213ENST00000618999 FAM222AQ5U5X8 452 aa4.98□□□□□ -1.61
SRGAP3-213ENST00000618999 IGKV3D-7A0A0C4DH55 119 aa4.98□□□□□ -1.61
SRGAP3-213ENST00000618999 LOC107984640A0A0U1RRK4 108 aa4.98□□□□□ -1.61
SRGAP3-213ENST00000618999 S100A7L2Q5SY68 101 aa4.98□□□□□ -1.61
SRGAP3-213ENST00000618999 C11orf68Q9H3H3 251 aaKnown RBP4.98□□□□□ -1.61
SRGAP3-213ENST00000618999 C14orf132Q9NPU4 83 aa4.98□□□□□ -1.61
SRGAP3-213ENST00000618999 IGLV5-39A0A0G2JS06 123 aa4.98□□□□□ -1.61
SRGAP3-213ENST00000618999 A0A1B0GX51 115 aa4.98□□□□□ -1.61
SRGAP3-213ENST00000618999 RPL35AP18077 110 aaKnown RBP4.98□□□□□ -1.61
SRGAP3-213ENST00000618999 ODF3L2Q3SX64 289 aa4.98□□□□□ -1.61
SRGAP3-213ENST00000618999 IGLV1-51P01701 117 aa4.97□□□□□ -1.61
SRGAP3-213ENST00000618999 CMC4P56277 68 aaPredicted RBP4.97□□□□□ -1.61
SRGAP3-213ENST00000618999 HRCT1Q6UXD1 115 aa4.97□□□□□ -1.61
SRGAP3-213ENST00000618999 LECT2O14960 151 aa4.97□□□□□ -1.61
SRGAP3-213ENST00000618999 COX7CP15954 63 aa4.97□□□□□ -1.61
SRGAP3-213ENST00000618999 SDIM1Q6ZPB5 146 aa4.97□□□□□ -1.61
SRGAP3-213ENST00000618999 NOP10Q9NPE3 64 aaKnown RBP4.97□□□□□ -1.61
SRGAP3-213ENST00000618999 LINC00694P0DN24 101 aa4.97□□□□□ -1.61
SRGAP3-213ENST00000618999 LINC00526Q96FQ7 95 aa4.97□□□□□ -1.61
SRGAP3-213ENST00000618999 WFDC10AQ9H1F0 79 aa4.97□□□□□ -1.61
SRGAP3-213ENST00000618999 KRTAP24-1Q3LI83 254 aa4.96□□□□□ -1.61
SRGAP3-213ENST00000618999 Q6ZTI0 123 aa4.96□□□□□ -1.62
SRGAP3-213ENST00000618999 FAM19A5Q7Z5A7 132 aaPredicted RBP4.96□□□□□ -1.62
SRGAP3-213ENST00000618999 ORMDL1Q9P0S3 153 aa4.96□□□□□ -1.62
SRGAP3-213ENST00000618999 RPL28P46779 137 aaKnown RBP4.96□□□□□ -1.62
SRGAP3-213ENST00000618999 C9orf66Q5T8R8 295 aa4.96□□□□□ -1.62
SRGAP3-213ENST00000618999 SOSTDC1Q6X4U4 206 aa4.96□□□□□ -1.62
SRGAP3-213ENST00000618999 CDC42SE2Q9NRR3 84 aa4.96□□□□□ -1.62
SRGAP3-213ENST00000618999 C5orf38Q86SI9 138 aa4.95□□□□□ -1.62
SRGAP3-213ENST00000618999 C11orf72Q8NBR9 251 aa4.95□□□□□ -1.62
SRGAP3-213ENST00000618999 FAM104AQ969W3 186 aa4.95□□□□□ -1.62
SRGAP3-213ENST00000618999 hADV29S1A0JD25 119 aa4.94□□□□□ -1.62
SRGAP3-213ENST00000618999 RPL18AQ02543 176 aaKnown RBP4.94□□□□□ -1.62
SRGAP3-213ENST00000618999 IL17DQ8TAD2 202 aa4.94□□□□□ -1.62
SRGAP3-213ENST00000618999 SMIM11BQ8TCY0 68 aa4.94□□□□□ -1.62
SRGAP3-213ENST00000618999 MRAPQ8TCY5 172 aa4.94□□□□□ -1.62
SRGAP3-213ENST00000618999 SPATA3Q8NHX4 192 aa4.94□□□□□ -1.62
SRGAP3-213ENST00000618999 SMCR5Q8TEV8 140 aa4.94□□□□□ -1.62
SRGAP3-213ENST00000618999 FAM218AQ96MZ4 157 aa4.94□□□□□ -1.62
SRGAP3-213ENST00000618999 SS18Q15532 418 aa4.94□□□□□ -1.62
SRGAP3-213ENST00000618999 COL6A5A8TX70 2615 aa4.94□□□□□ -1.62
SRGAP3-213ENST00000618999 STAB1Q9NY15 2570 aa4.93□□□□□ -1.62
SRGAP3-213ENST00000618999 IBA57-AS1B1ANH7 110 aa4.93□□□□□ -1.62
SRGAP3-213ENST00000618999 TENM1Q9UKZ4 2725 aa4.93□□□□□ -1.62
SRGAP3-213ENST00000618999 UBL5Q9BZL1 73 aa4.93□□□□□ -1.62
SRGAP3-213ENST00000618999 NCR3O14931 201 aa4.93□□□□□ -1.62
SRGAP3-213ENST00000618999 C16orf74Q96GX8 76 aa4.93□□□□□ -1.62
SRGAP3-213ENST00000618999 A0A087WYN8 130 aa4.92□□□□□ -1.62
SRGAP3-213ENST00000618999 Q6JHZ5 121 aa4.92□□□□□ -1.62
SRGAP3-213ENST00000618999 LINC00337Q8N6G1 96 aa4.92□□□□□ -1.62
SRGAP3-213ENST00000618999 SERP2Q8N6R1 65 aa4.92□□□□□ -1.62
SRGAP3-213ENST00000618999 KLK5Q9Y337 293 aaPredicted RBP4.92□□□□□ -1.62
SRGAP3-213ENST00000618999 JMJD7-PLA2G4BH0Y9G9 81 aa4.92□□□□□ -1.62
SRGAP3-213ENST00000618999 SLPIP03973 132 aa4.92□□□□□ -1.62
SRGAP3-213ENST00000618999 XCL1P47992 114 aa4.92□□□□□ -1.62
SRGAP3-213ENST00000618999 CCL18P55774 89 aa4.92□□□□□ -1.62
SRGAP3-213ENST00000618999 FAM30AQ9NZY2 134 aa4.92□□□□□ -1.62
SRGAP3-213ENST00000618999 C1orf195Q5TG92 126 aa4.92□□□□□ -1.62
SRGAP3-213ENST00000618999 LCE2BO14633 110 aa4.91□□□□□ -1.62
SRGAP3-213ENST00000618999 DEFB130BP0DP73 79 aa4.91□□□□□ -1.62
SRGAP3-213ENST00000618999 DEFB130AP0DP74 79 aa4.91□□□□□ -1.62
SRGAP3-213ENST00000618999 NTM-AS1Q6ZSK4 140 aa4.91□□□□□ -1.62
SRGAP3-213ENST00000618999 A8MTW9 85 aa4.91□□□□□ -1.62
SRGAP3-213ENST00000618999 C1orf158Q8N1D5 194 aa4.91□□□□□ -1.62
SRGAP3-213ENST00000618999 TMEM258P61165 79 aa4.91□□□□□ -1.62
SRGAP3-213ENST00000618999 BRK1Q8WUW1 75 aa4.91□□□□□ -1.62
SRGAP3-213ENST00000618999 LAMTOR3Q9UHA4 124 aa4.91□□□□□ -1.62
SRGAP3-213ENST00000618999 VWFP04275 2813 aa4.9□□□□□ -1.62
SRGAP3-213ENST00000618999 TRBV6-4A0A1B0GX49 114 aa4.9□□□□□ -1.62
SRGAP3-213ENST00000618999 CRYGAP11844 174 aa4.9□□□□□ -1.62
SRGAP3-213ENST00000618999 LINC00846Q9NV44 126 aa4.9□□□□□ -1.62
SRGAP3-213ENST00000618999 A0A087WVE0 104 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms