RNA–Protein interactions for RNA: ENST00000617271.4

PCDH15-231, Transcript of protocadherin related 15, human

APPRIS P3 TSL 5 BASIC

Gene PCDH15, Length 6,425 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCDH15-231	ENST00000617271	RAI1	Q7Z5J4	1906 aa	Predicted RBP	5.13	□□□□□ -1.59
PCDH15-231	ENST00000617271	C16orf90	A8MZG2	172 aa		5.13	□□□□□ -1.59
PCDH15-231	ENST00000617271		J3QL48	77 aa		5.13	□□□□□ -1.59
PCDH15-231	ENST00000617271	TMEM254	Q8TBM7	123 aa		5.12	□□□□□ -1.59
PCDH15-231	ENST00000617271	BCE1	O60756	84 aa		5.12	□□□□□ -1.59
PCDH15-231	ENST00000617271	IGLV5-39	A0A0G2JS06	123 aa		5.12	□□□□□ -1.59
PCDH15-231	ENST00000617271		A0A1W2PPR1	153 aa		5.12	□□□□□ -1.59
PCDH15-231	ENST00000617271	PMAIP1	Q13794	54 aa		5.12	□□□□□ -1.59
PCDH15-231	ENST00000617271	KIAA0087	Q14695	138 aa		5.12	□□□□□ -1.59
PCDH15-231	ENST00000617271	CEP250	Q9BV73	2442 aa		5.12	□□□□□ -1.59
PCDH15-231	ENST00000617271		A0A1B0GU69	56 aa		5.12	□□□□□ -1.59
PCDH15-231	ENST00000617271	LINC00167	Q96N53	147 aa		5.12	□□□□□ -1.59
PCDH15-231	ENST00000617271	URB1-AS1	Q96HZ7	61 aa		5.12	□□□□□ -1.59
PCDH15-231	ENST00000617271	PKDREJ	Q9NTG1	2253 aa		5.11	□□□□□ -1.59
PCDH15-231	ENST00000617271	C8orf87	E5RJ46	101 aa		5.11	□□□□□ -1.59
PCDH15-231	ENST00000617271	LINC00313	P59037	77 aa		5.11	□□□□□ -1.59
PCDH15-231	ENST00000617271	DEFB116	Q30KQ4	102 aa		5.11	□□□□□ -1.59
PCDH15-231	ENST00000617271		A0A087WVE0	104 aa		5.11	□□□□□ -1.59
PCDH15-231	ENST00000617271	PCDH15	Q96QU1	1955 aa		5.11	□□□□□ -1.59
PCDH15-231	ENST00000617271	EP300	Q09472	2414 aa	Predicted RBP	5.1	□□□□□ -1.59
PCDH15-231	ENST00000617271	ELOF1	P60002	83 aa	Known RBP	5.1	□□□□□ -1.59
PCDH15-231	ENST00000617271	ATP11AUN	Q6ZP68	121 aa		5.1	□□□□□ -1.59
PCDH15-231	ENST00000617271	RPL37A	P61513	92 aa	Known RBP	5.1	□□□□□ -1.59
PCDH15-231	ENST00000617271	NCOA6	Q14686	2063 aa	Predicted RBP	5.1	□□□□□ -1.59
PCDH15-231	ENST00000617271	FAM19A4	Q96LR4	140 aa		5.1	□□□□□ -1.59
PCDH15-231	ENST00000617271	LINC00315	P59091	139 aa		5.1	□□□□□ -1.59
PCDH15-231	ENST00000617271	SOSTDC1	Q6X4U4	206 aa		5.1	□□□□□ -1.59
PCDH15-231	ENST00000617271	C6orf48	Q9UBA6	75 aa		5.09	□□□□□ -1.59
PCDH15-231	ENST00000617271	CPAMD8	Q8IZJ3	1885 aa		5.09	□□□□□ -1.59
PCDH15-231	ENST00000617271	SMIM29	Q86T20	159 aa		5.09	□□□□□ -1.59
PCDH15-231	ENST00000617271	KIAA1549	Q9HCM3	1950 aa		5.09	□□□□□ -1.6
PCDH15-231	ENST00000617271	COL4A2	P08572	1712 aa		5.09	□□□□□ -1.6
PCDH15-231	ENST00000617271	KRTAP24-1	Q3LI83	254 aa		5.08	□□□□□ -1.6
PCDH15-231	ENST00000617271	PTPRS	Q13332	1948 aa		5.08	□□□□□ -1.6
PCDH15-231	ENST00000617271	POLE	Q07864	2286 aa		5.08	□□□□□ -1.6
PCDH15-231	ENST00000617271	SPATA3	Q8NHX4	192 aa		5.08	□□□□□ -1.6
PCDH15-231	ENST00000617271	PCNX2	A6NKB5	2137 aa		5.08	□□□□□ -1.6
PCDH15-231	ENST00000617271	GVQW2	A0A096LPI5	108 aa	Predicted RBP	5.08	□□□□□ -1.6
PCDH15-231	ENST00000617271	AKAP6	Q13023	2319 aa		5.08	□□□□□ -1.6
PCDH15-231	ENST00000617271		Q6ZRX8	168 aa		5.08	□□□□□ -1.6
PCDH15-231	ENST00000617271	CEP290	O15078	2479 aa		5.08	□□□□□ -1.6
PCDH15-231	ENST00000617271	TRAV22	A0A0B4J277	110 aa		5.07	□□□□□ -1.6
PCDH15-231	ENST00000617271	SPTBN1	Q01082	2364 aa	Known RBP	5.07	□□□□□ -1.6
PCDH15-231	ENST00000617271	PHF5A	Q7RTV0	110 aa	Known RBP	5.07	□□□□□ -1.6
PCDH15-231	ENST00000617271	IGLV5-45	A0A087WSX0	123 aa		5.07	□□□□□ -1.6
PCDH15-231	ENST00000617271	HIVEP2	P31629	2446 aa		5.07	□□□□□ -1.6
PCDH15-231	ENST00000617271	IGHV3OR16-9	A0A0B4J2B5	98 aa		5.06	□□□□□ -1.6
PCDH15-231	ENST00000617271	PSPHP1	O15172	72 aa		5.06	□□□□□ -1.6
PCDH15-231	ENST00000617271	WNK2	Q9Y3S1	2297 aa		5.06	□□□□□ -1.6
PCDH15-231	ENST00000617271	LOC110117498	A0A087WWA1	95 aa		5.06	□□□□□ -1.6
PCDH15-231	ENST00000617271	EPM2A	B3EWF7	344 aa		5.06	□□□□□ -1.6
PCDH15-231	ENST00000617271	MED12L	Q86YW9	2145 aa		5.06	□□□□□ -1.6
PCDH15-231	ENST00000617271	LINC00846	Q9NV44	126 aa		5.06	□□□□□ -1.6
PCDH15-231	ENST00000617271	LINC00310	P59036	64 aa		5.06	□□□□□ -1.6
PCDH15-231	ENST00000617271	LOC101927531	A0A1B0GV80	90 aa		5.05	□□□□□ -1.6
PCDH15-231	ENST00000617271	LINC00476	Q8WZB0	136 aa		5.05	□□□□□ -1.6
PCDH15-231	ENST00000617271		A0A096LNJ9	63 aa		5.05	□□□□□ -1.6
PCDH15-231	ENST00000617271		A8MTW9	85 aa		5.05	□□□□□ -1.6
PCDH15-231	ENST00000617271	LINC00588	Q9Y4M8	146 aa		5.05	□□□□□ -1.6
PCDH15-231	ENST00000617271		Q96NJ1	140 aa		5.04	□□□□□ -1.6
PCDH15-231	ENST00000617271	SPAG11A	Q6PDA7	123 aa		5.04	□□□□□ -1.6
PCDH15-231	ENST00000617271	CNOT1	A5YKK6	2376 aa	Known RBP	5.04	□□□□□ -1.6
PCDH15-231	ENST00000617271		Q8NAQ8	132 aa		5.03	□□□□□ -1.6
PCDH15-231	ENST00000617271	DNAH10OS	P0CZ25	163 aa		5.03	□□□□□ -1.6
PCDH15-231	ENST00000617271	COX6B2	Q6YFQ2	88 aa		5.03	□□□□□ -1.6
PCDH15-231	ENST00000617271	TET2	Q6N021	2002 aa	Predicted RBP	5.03	□□□□□ -1.6
PCDH15-231	ENST00000617271	NCOR1	O75376	2440 aa		5.02	□□□□□ -1.61
PCDH15-231	ENST00000617271	CAD	P27708	2225 aa		5.01	□□□□□ -1.61
PCDH15-231	ENST00000617271		Q6ZQT0	140 aa		5.01	□□□□□ -1.61
PCDH15-231	ENST00000617271	TRBV7-4	A0A0J9YYF1	115 aa		5.01	□□□□□ -1.61
PCDH15-231	ENST00000617271	CHTF8	P0CG12	524 aa		5.01	□□□□□ -1.61
PCDH15-231	ENST00000617271	ST20-AS1	Q8NBB2	130 aa		5.01	□□□□□ -1.61
PCDH15-231	ENST00000617271	LINC00336	Q6ZUF6	198 aa		5	□□□□□ -1.61
PCDH15-231	ENST00000617271	GPR179	Q6PRD1	2367 aa		5	□□□□□ -1.61
PCDH15-231	ENST00000617271		A8MWP4	228 aa		5	□□□□□ -1.61
PCDH15-231	ENST00000617271	LINC00304	Q8N9R0	145 aa		4.99	□□□□□ -1.61
PCDH15-231	ENST00000617271	MRPL34	Q9BQ48	92 aa	Known RBP	4.98	□□□□□ -1.61
PCDH15-231	ENST00000617271	KLK9	Q2XQG4	91 aa		4.98	□□□□□ -1.61
PCDH15-231	ENST00000617271	SPTBN2	O15020	2390 aa		4.98	□□□□□ -1.61
PCDH15-231	ENST00000617271		Q9UF83	564 aa		4.97	□□□□□ -1.61
PCDH15-231	ENST00000617271	ROS1	P08922	2347 aa		4.97	□□□□□ -1.61
PCDH15-231	ENST00000617271	SHANK1	Q9Y566	2161 aa		4.97	□□□□□ -1.61
PCDH15-231	ENST00000617271	SSBP3-AS1	Q7Z2R9	100 aa		4.96	□□□□□ -1.61
PCDH15-231	ENST00000617271	TANC2	Q9HCD6	1990 aa		4.96	□□□□□ -1.62
PCDH15-231	ENST00000617271	IGLV1-50	A0A075B6I6	118 aa		4.96	□□□□□ -1.62
PCDH15-231	ENST00000617271	HCFC1	P51610	2035 aa		4.96	□□□□□ -1.62
PCDH15-231	ENST00000617271	EML5	Q05BV3	1969 aa		4.96	□□□□□ -1.62
PCDH15-231	ENST00000617271	EXPH5	Q8NEV8	1989 aa		4.95	□□□□□ -1.62
PCDH15-231	ENST00000617271	IGLV6-57	P01721	117 aa		4.95	□□□□□ -1.62
PCDH15-231	ENST00000617271	FREM1	Q5H8C1	2179 aa		4.95	□□□□□ -1.62
PCDH15-231	ENST00000617271	RBM12B-AS1	Q9P1G2	102 aa		4.95	□□□□□ -1.62
PCDH15-231	ENST00000617271	ABCA1	O95477	2261 aa		4.95	□□□□□ -1.62
PCDH15-231	ENST00000617271	ERC2-IT1	O76042	136 aa		4.95	□□□□□ -1.62
PCDH15-231	ENST00000617271	VPREB1	P12018	145 aa		4.95	□□□□□ -1.62
PCDH15-231	ENST00000617271	FAM218A	Q96MZ4	157 aa		4.94	□□□□□ -1.62
PCDH15-231	ENST00000617271	PRO0628	Q9UI54	55 aa		4.94	□□□□□ -1.62
PCDH15-231	ENST00000617271	C19orf73	Q9NVV2	129 aa		4.94	□□□□□ -1.62
PCDH15-231	ENST00000617271	SPINT4	Q6UDR6	99 aa		4.93	□□□□□ -1.62
PCDH15-231	ENST00000617271	KCNQ1DN	Q9H478	68 aa		4.93	□□□□□ -1.62
PCDH15-231	ENST00000617271	PLA2G2D	Q9UNK4	145 aa		4.93	□□□□□ -1.62

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