RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 DNAH10OSP0CZ25 163 aa2.35□□□□□ -2.03
LPP-220ENST00000617246 CELA1Q9UNI1 258 aa2.35□□□□□ -2.03
LPP-220ENST00000617246 IGLC2P0DOY2 106 aa2.35□□□□□ -2.03
LPP-220ENST00000617246 C12orf74Q32Q52 190 aa2.35□□□□□ -2.03
LPP-220ENST00000617246 EP400Q96L91 3159 aa2.35□□□□□ -2.03
LPP-220ENST00000617246 Q6ZPA2 131 aa2.34□□□□□ -2.03
LPP-220ENST00000617246 BCE1O60756 84 aa2.34□□□□□ -2.03
LPP-220ENST00000617246 ABCA2Q9BZC7 2435 aa2.34□□□□□ -2.03
LPP-220ENST00000617246 C9orf116Q5BN46 136 aaPredicted RBP2.34□□□□□ -2.03
LPP-220ENST00000617246 CDSNQ15517 529 aa2.34□□□□□ -2.03
LPP-220ENST00000617246 TRBV24-1A0A075B6N3 115 aa2.34□□□□□ -2.03
LPP-220ENST00000617246 KLLNB2CW77 178 aa2.34□□□□□ -2.03
LPP-220ENST00000617246 ATP5EP2Q5VTU8 51 aa2.34□□□□□ -2.03
LPP-220ENST00000617246 C3orf22Q8N5N4 141 aa2.34□□□□□ -2.03
LPP-220ENST00000617246 APLNQ9ULZ1 77 aa2.34□□□□□ -2.03
LPP-220ENST00000617246 TAX1BP3O14907 124 aa2.34□□□□□ -2.04
LPP-220ENST00000617246 XAGE1AQ9HD64 81 aa2.34□□□□□ -2.04
LPP-220ENST00000617246 Q8NAQ8 132 aa2.34□□□□□ -2.04
LPP-220ENST00000617246 TP53TG3Q9ULZ0 132 aa2.33□□□□□ -2.04
LPP-220ENST00000617246 SMR3BP02814 79 aaPredicted RBP2.33□□□□□ -2.04
LPP-220ENST00000617246 ETDBQ3ZM63 59 aa2.33□□□□□ -2.04
LPP-220ENST00000617246 Q96NJ1 140 aa2.33□□□□□ -2.04
LPP-220ENST00000617246 ATP5EP56381 51 aaPredicted RBP2.33□□□□□ -2.04
LPP-220ENST00000617246 GDF5OSQ5U4N7 250 aa2.33□□□□□ -2.04
LPP-220ENST00000617246 SPINT4Q6UDR6 99 aa2.33□□□□□ -2.04
LPP-220ENST00000617246 TRBV6-5A0A0K0K1A5 114 aa2.33□□□□□ -2.04
LPP-220ENST00000617246 A0A0B4J2C4 111 aa2.33□□□□□ -2.04
LPP-220ENST00000617246 LINC00167Q96N53 147 aa2.33□□□□□ -2.04
LPP-220ENST00000617246 SSBP3-AS1Q7Z2R9 100 aa2.33□□□□□ -2.04
LPP-220ENST00000617246 TP53AIP1Q9HCN2 124 aa2.33□□□□□ -2.04
LPP-220ENST00000617246 NPYP01303 97 aa2.33□□□□□ -2.04
LPP-220ENST00000617246 IGLV6-57P01721 117 aa2.33□□□□□ -2.04
LPP-220ENST00000617246 C19orf73Q9NVV2 129 aa2.33□□□□□ -2.04
LPP-220ENST00000617246 SONP18583 2426 aaKnown RBP2.32□□□□□ -2.04
LPP-220ENST00000617246 A0A0J9YXV3 536 aa2.32□□□□□ -2.04
LPP-220ENST00000617246 LINC01554Q52M75 96 aa2.32□□□□□ -2.04
LPP-220ENST00000617246 C11orf1Q9H5F2 150 aa2.32□□□□□ -2.04
LPP-220ENST00000617246 H3BS24 57 aa2.31□□□□□ -2.04
LPP-220ENST00000617246 H3BT86 120 aa2.31□□□□□ -2.04
LPP-220ENST00000617246 F8W1H4 67 aa2.31□□□□□ -2.04
LPP-220ENST00000617246 GVQW2A0A096LPI5 108 aaPredicted RBP2.31□□□□□ -2.04
LPP-220ENST00000617246 E9PLD3 99 aa2.31□□□□□ -2.04
LPP-220ENST00000617246 FAM240AA0A1B0GVK7 77 aa2.31□□□□□ -2.04
LPP-220ENST00000617246 PHF5AQ7RTV0 110 aaKnown RBP2.31□□□□□ -2.04
LPP-220ENST00000617246 TSHBP01222 138 aa2.31□□□□□ -2.04
LPP-220ENST00000617246 SDIM1Q6ZPB5 146 aa2.31□□□□□ -2.04
LPP-220ENST00000617246 CFC1BP0CG36 223 aa2.31□□□□□ -2.04
LPP-220ENST00000617246 CFC1P0CG37 223 aa2.31□□□□□ -2.04
LPP-220ENST00000617246 HIVEP3Q5T1R4 2406 aa2.31□□□□□ -2.04
LPP-220ENST00000617246 RPL39P62891 51 aaKnown RBP2.31□□□□□ -2.04
LPP-220ENST00000617246 IGLV7-43P04211 117 aa2.3□□□□□ -2.04
LPP-220ENST00000617246 WFDC13Q8IUB5 93 aa2.3□□□□□ -2.04
LPP-220ENST00000617246 IGKV2D-30A0A075B6S6 120 aa2.3□□□□□ -2.04
LPP-220ENST00000617246 IGKV2-30P06310 120 aa2.3□□□□□ -2.04
LPP-220ENST00000617246 IGLV4-3A0A075B6K6 122 aa2.3□□□□□ -2.04
LPP-220ENST00000617246 LINC00205P59089 165 aa2.3□□□□□ -2.04
LPP-220ENST00000617246 KRTAP10-11P60412 298 aa2.3□□□□□ -2.04
LPP-220ENST00000617246 LINC00483Q53H64 154 aa2.3□□□□□ -2.04
LPP-220ENST00000617246 IGLV7-46A0A075B6I9 117 aa2.3□□□□□ -2.04
LPP-220ENST00000617246 TIMM17BO60830 172 aa2.3□□□□□ -2.04
LPP-220ENST00000617246 C22orf24Q9Y442 160 aa2.3□□□□□ -2.04
LPP-220ENST00000617246 H3BUT2 72 aa2.3□□□□□ -2.04
LPP-220ENST00000617246 FP248Q71RG6 208 aaPredicted RBP2.3□□□□□ -2.04
LPP-220ENST00000617246 A0A1B0GW54 56 aa2.3□□□□□ -2.04
LPP-220ENST00000617246 RNASE3P12724 160 aaKnown RBP2.3□□□□□ -2.04
LPP-220ENST00000617246 PRLHP81277 87 aa2.3□□□□□ -2.04
LPP-220ENST00000617246 TRBV27A0A0K0K1C4 114 aa2.3□□□□□ -2.04
LPP-220ENST00000617246 MYO9AB2RTY4 2548 aa2.29□□□□□ -2.04
LPP-220ENST00000617246 SMCR5Q8TEV8 140 aa2.29□□□□□ -2.04
LPP-220ENST00000617246 A0A087WYN8 130 aa2.29□□□□□ -2.04
LPP-220ENST00000617246 CDC42SE2Q9NRR3 84 aa2.29□□□□□ -2.04
LPP-220ENST00000617246 ZFHX2Q9C0A1 2572 aaPredicted RBP2.29□□□□□ -2.04
LPP-220ENST00000617246 CXCL6P80162 114 aa2.29□□□□□ -2.04
LPP-220ENST00000617246 FAM229BQ4G0N7 80 aa2.29□□□□□ -2.04
LPP-220ENST00000617246 K7EQZ3 153 aa2.29□□□□□ -2.04
LPP-220ENST00000617246 ANKHD1Q8IWZ3 2542 aaKnown RBP2.29□□□□□ -2.04
LPP-220ENST00000617246 PIEZO1Q92508 2521 aa2.29□□□□□ -2.04
LPP-220ENST00000617246 RSPO1Q2MKA7 263 aaPredicted RBP2.29□□□□□ -2.04
LPP-220ENST00000617246 IGLC3P0DOY3 106 aa2.29□□□□□ -2.04
LPP-220ENST00000617246 Q6ZQY7 126 aa2.29□□□□□ -2.04
LPP-220ENST00000617246 Q9UF83 564 aa2.29□□□□□ -2.04
LPP-220ENST00000617246 ZNF861PO60384 105 aa2.28□□□□□ -2.04
LPP-220ENST00000617246 A0A1W2PPR1 153 aa2.28□□□□□ -2.04
LPP-220ENST00000617246 ZNF22P17026 224 aaPredicted RBP2.28□□□□□ -2.04
LPP-220ENST00000617246 TRBV7-6A0A0J9YX20 115 aa2.28□□□□□ -2.04
LPP-220ENST00000617246 PRO0461Q9UI25 63 aa2.28□□□□□ -2.04
LPP-220ENST00000617246 C1orf195Q5TG92 126 aa2.28□□□□□ -2.04
LPP-220ENST00000617246 C18orf32Q8TCD1 76 aa2.28□□□□□ -2.04
LPP-220ENST00000617246 FAM30AQ9NZY2 134 aa2.28□□□□□ -2.04
LPP-220ENST00000617246 MYO18BQ8IUG5 2567 aa2.27□□□□□ -2.05
LPP-220ENST00000617246 CSPG4Q6UVK1 2322 aa2.27□□□□□ -2.05
LPP-220ENST00000617246 WFDC2Q14508 124 aa2.27□□□□□ -2.05
LPP-220ENST00000617246 DOPEY1Q5JWR5 2465 aa2.27□□□□□ -2.05
LPP-220ENST00000617246 M0QY20 66 aa2.27□□□□□ -2.05
LPP-220ENST00000617246 NDUFC1O43677 76 aa2.27□□□□□ -2.05
LPP-220ENST00000617246 LUZP6Q538Z0 58 aa2.27□□□□□ -2.05
LPP-220ENST00000617246 PLAC4Q8WY50 150 aa2.27□□□□□ -2.05
LPP-220ENST00000617246 RETNLBQ9BQ08 111 aa2.27□□□□□ -2.05
LPP-220ENST00000617246 C9orf118A6NHY6 69 aa2.27□□□□□ -2.05
LPP-220ENST00000617246 PMAIP1Q13794 54 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms