RNA–Protein interactions for RNA: ENST00000616944.4

CBWD1-225, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-225ENST00000616944 C6orf226Q5I0X4 101 aa9.96□□□□□ -0.81
CBWD1-225ENST00000616944 C1orf134Q5TEV5 83 aa9.96□□□□□ -0.81
CBWD1-225ENST00000616944 NTN5Q8WTR8 489 aaPredicted RBP9.96□□□□□ -0.81
CBWD1-225ENST00000616944 LINC00526Q96FQ7 95 aa9.96□□□□□ -0.81
CBWD1-225ENST00000616944 TSTD3H0UI37 97 aa9.96□□□□□ -0.82
CBWD1-225ENST00000616944 CXCL5P42830 114 aa9.96□□□□□ -0.82
CBWD1-225ENST00000616944 C2orf82Q6UX34 121 aa9.96□□□□□ -0.82
CBWD1-225ENST00000616944 UQCR10Q9UDW1 63 aa9.96□□□□□ -0.82
CBWD1-225ENST00000616944 LECT2O14960 151 aa9.95□□□□□ -0.82
CBWD1-225ENST00000616944 SFTA2Q6UW10 78 aa9.95□□□□□ -0.82
CBWD1-225ENST00000616944 ZNF561-AS1K7EIQ3 104 aa9.94□□□□□ -0.82
CBWD1-225ENST00000616944 C2orf91Q6ZV80 131 aa9.94□□□□□ -0.82
CBWD1-225ENST00000616944 C2orf48Q96LS8 159 aa9.94□□□□□ -0.82
CBWD1-225ENST00000616944 MIEN1Q9BRT3 115 aa9.94□□□□□ -0.82
CBWD1-225ENST00000616944 A0A0J9YXY3 114 aa9.93□□□□□ -0.82
CBWD1-225ENST00000616944 CKS1BP61024 79 aa9.93□□□□□ -0.82
CBWD1-225ENST00000616944 HERV-K104P63124 156 aa9.93□□□□□ -0.82
CBWD1-225ENST00000616944 C10orf25Q5T742 122 aa9.93□□□□□ -0.82
CBWD1-225ENST00000616944 DNAH17Q9UFH2 4485 aa9.92□□□□□ -0.82
CBWD1-225ENST00000616944 F8WDY8 70 aa9.92□□□□□ -0.82
CBWD1-225ENST00000616944 SLPIP03973 132 aa9.92□□□□□ -0.82
CBWD1-225ENST00000616944 UNQ6190/PRO20217Q6UXQ8 127 aa9.92□□□□□ -0.82
CBWD1-225ENST00000616944 RTL8CO15255 209 aa9.91□□□□□ -0.82
CBWD1-225ENST00000616944 LITAFQ99732 161 aa9.91□□□□□ -0.82
CBWD1-225ENST00000616944 HIGD1BQ9P298 99 aa9.91□□□□□ -0.82
CBWD1-225ENST00000616944 SCGB1D4Q6XE38 83 aa9.9□□□□□ -0.82
CBWD1-225ENST00000616944 CAMK2N2Q96S95 79 aa9.9□□□□□ -0.82
CBWD1-225ENST00000616944 A0A087WTM6 91 aa9.89□□□□□ -0.83
CBWD1-225ENST00000616944 C14orf177Q52M58 125 aa9.89□□□□□ -0.83
CBWD1-225ENST00000616944 Q6ZRU5 148 aa9.89□□□□□ -0.83
CBWD1-225ENST00000616944 C6orf48Q9UBA6 75 aa9.89□□□□□ -0.83
CBWD1-225ENST00000616944 TRBV30A0A0K0K1B3 111 aa9.89□□□□□ -0.83
CBWD1-225ENST00000616944 HECTD4Q9Y4D8 3996 aa9.88□□□□□ -0.83
CBWD1-225ENST00000616944 TIMM17BO60830 172 aa9.88□□□□□ -0.83
CBWD1-225ENST00000616944 DDTP30046 118 aa9.88□□□□□ -0.83
CBWD1-225ENST00000616944 SYCNQ0VAF6 134 aa9.88□□□□□ -0.83
CBWD1-225ENST00000616944 HNRNPA3P51991 378 aaKnown RBP9.87□□□□□ -0.83
CBWD1-225ENST00000616944 CNBPP62633 177 aaKnown RBP9.87□□□□□ -0.83
CBWD1-225ENST00000616944 C9orf116Q5BN46 136 aaPredicted RBP9.87□□□□□ -0.83
CBWD1-225ENST00000616944 Q8N814 137 aa9.87□□□□□ -0.83
CBWD1-225ENST00000616944 ERG28Q9UKR5 140 aa9.87□□□□□ -0.83
CBWD1-225ENST00000616944 FAT2Q9NYQ8 4349 aa9.87□□□□□ -0.83
CBWD1-225ENST00000616944 ADAMTSL4-AS1Q5T5F5 129 aa9.86□□□□□ -0.83
CBWD1-225ENST00000616944 SPANXB1Q9NS25 103 aaPredicted RBP9.86□□□□□ -0.83
CBWD1-225ENST00000616944 SMIM13P0DJ93 91 aa9.85□□□□□ -0.83
CBWD1-225ENST00000616944 TNP2Q05952 138 aa9.85□□□□□ -0.83
CBWD1-225ENST00000616944 COX17Q14061 63 aa9.85□□□□□ -0.83
CBWD1-225ENST00000616944 MEIG1Q5JSS6 88 aa9.85□□□□□ -0.83
CBWD1-225ENST00000616944 CARD19Q96LW7 228 aa9.85□□□□□ -0.83
CBWD1-225ENST00000616944 TMEM238C9JI98 176 aa9.85□□□□□ -0.83
CBWD1-225ENST00000616944 RNF151Q2KHN1 245 aa9.85□□□□□ -0.83
CBWD1-225ENST00000616944 LINC00587B1AMM8 73 aa9.84□□□□□ -0.83
CBWD1-225ENST00000616944 SPANXDQ9BXN6 97 aa9.84□□□□□ -0.83
CBWD1-225ENST00000616944 SPANXCQ9NY87 97 aa9.84□□□□□ -0.83
CBWD1-225ENST00000616944 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.83□□□□□ -0.84
CBWD1-225ENST00000616944 A0A0U1RRA0 63 aa9.83□□□□□ -0.84
CBWD1-225ENST00000616944 PFN2P35080 140 aa9.83□□□□□ -0.84
CBWD1-225ENST00000616944 CIRBPQ14011 172 aaKnown RBP9.83□□□□□ -0.84
CBWD1-225ENST00000616944 DAND5Q8N907 189 aa9.82□□□□□ -0.84
CBWD1-225ENST00000616944 PCP4L1A6NKN8 68 aa9.82□□□□□ -0.84
CBWD1-225ENST00000616944 PKD1P98161 4303 aa9.81□□□□□ -0.84
CBWD1-225ENST00000616944 TLX1NBP0CAT3 122 aa9.81□□□□□ -0.84
CBWD1-225ENST00000616944 LINC00158P58513 81 aa9.81□□□□□ -0.84
CBWD1-225ENST00000616944 CTAG1AP78358 180 aa9.81□□□□□ -0.84
CBWD1-225ENST00000616944 TAL2Q16559 108 aa9.81□□□□□ -0.84
CBWD1-225ENST00000616944 Q6ZVH6 145 aa9.81□□□□□ -0.84
CBWD1-225ENST00000616944 MIR7-3HGQ8N6C7 128 aa9.81□□□□□ -0.84
CBWD1-225ENST00000616944 DNAH11Q96DT5 4516 aa9.8□□□□□ -0.84
CBWD1-225ENST00000616944 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.8□□□□□ -0.84
CBWD1-225ENST00000616944 NDUFC2-KCTD14E9PQ53 114 aa9.8□□□□□ -0.84
CBWD1-225ENST00000616944 EIF4EBP3O60516 100 aaPredicted RBP9.8□□□□□ -0.84
CBWD1-225ENST00000616944 PTTG1IPP53801 180 aa9.8□□□□□ -0.84
CBWD1-225ENST00000616944 HSD52Q0P140 79 aa9.8□□□□□ -0.84
CBWD1-225ENST00000616944 HIST1H4GQ99525 98 aa9.8□□□□□ -0.84
CBWD1-225ENST00000616944 SRSF9Q13242 221 aaKnown RBP eCLIP9.79□□□□□ -0.84
CBWD1-225ENST00000616944 C9orf163Q8N9P6 203 aa9.79□□□□□ -0.84
CBWD1-225ENST00000616944 SOSTDC1Q6X4U4 206 aa9.78□□□□□ -0.84
CBWD1-225ENST00000616944 PPDPFQ9H3Y8 114 aa9.78□□□□□ -0.84
CBWD1-225ENST00000616944 LOC107984156A0A0G2JMH3 177 aa9.78□□□□□ -0.84
CBWD1-225ENST00000616944 Q6ZRP5 223 aa9.78□□□□□ -0.84
CBWD1-225ENST00000616944 ARL17AQ8IVW1 177 aa9.78□□□□□ -0.84
CBWD1-225ENST00000616944 CEND1Q8N111 149 aa9.78□□□□□ -0.84
CBWD1-225ENST00000616944 LINC00308Q8TCZ7 52 aa9.78□□□□□ -0.84
CBWD1-225ENST00000616944 IFITM1P13164 125 aa9.77□□□□□ -0.85
CBWD1-225ENST00000616944 SND1-IT1Q9HBX3 110 aa9.77□□□□□ -0.85
CBWD1-225ENST00000616944 EREGO14944 169 aa9.76□□□□□ -0.85
CBWD1-225ENST00000616944 NPC2P61916 151 aa9.76□□□□□ -0.85
CBWD1-225ENST00000616944 MUSTN1Q8IVN3 82 aa9.76□□□□□ -0.85
CBWD1-225ENST00000616944 LOC107984640A0A0U1RRK4 108 aa9.75□□□□□ -0.85
CBWD1-225ENST00000616944 LINC00336Q6ZUF6 198 aa9.75□□□□□ -0.85
CBWD1-225ENST00000616944 GCSHP23434 173 aa9.74□□□□□ -0.85
CBWD1-225ENST00000616944 FXYD2P54710 66 aa9.74□□□□□ -0.85
CBWD1-225ENST00000616944 BVES-AS1Q5T3Y7 98 aa9.74□□□□□ -0.85
CBWD1-225ENST00000616944 FUSP35637 526 aaKnown RBP eCLIP9.74□□□□□ -0.85
CBWD1-225ENST00000616944 KRTAP10-2P60368 255 aa9.74□□□□□ -0.85
CBWD1-225ENST00000616944 RPL18AQ02543 176 aaKnown RBP9.74□□□□□ -0.85
CBWD1-225ENST00000616944 EPPK1P58107 5090 aaKnown RBP9.73□□□□□ -0.85
CBWD1-225ENST00000616944 HINT1P49773 126 aaPredicted RBP9.73□□□□□ -0.85
CBWD1-225ENST00000616944 LINC01620Q4KN68 170 aa9.73□□□□□ -0.85
CBWD1-225ENST00000616944 SDIM1Q6ZPB5 146 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms