RNA–Protein interactions for RNA: ENST00000616236.1

RFC3-203, Transcript of replication factor C subunit 3, humanhuman

TSL 3

Gene RFC3, Length 612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-203ENST00000616236 SNRPFP62306 86 aaKnown RBP1.21□□□□□ -2.22
RFC3-203ENST00000616236 TP53AIP1Q9HCN2 124 aa1.21□□□□□ -2.22
RFC3-203ENST00000616236 NMSQ5H8A3 153 aa1.2□□□□□ -2.22
RFC3-203ENST00000616236 ALKAL2Q6UX46 152 aa1.2□□□□□ -2.22
RFC3-203ENST00000616236 C6orf201Q7Z4U5 140 aa1.2□□□□□ -2.22
RFC3-203ENST00000616236 S100A13Q99584 98 aa1.2□□□□□ -2.22
RFC3-203ENST00000616236 PRO0255Q9UI72 69 aa1.2□□□□□ -2.22
RFC3-203ENST00000616236 TENM1Q9UKZ4 2725 aa1.2□□□□□ -2.22
RFC3-203ENST00000616236 PAPPAQ13219 1627 aa1.19□□□□□ -2.22
RFC3-203ENST00000616236 A0A0G2JMZ2 1700 aa1.19□□□□□ -2.22
RFC3-203ENST00000616236 A0A1B0GU69 56 aa1.19□□□□□ -2.22
RFC3-203ENST00000616236 IQCF6A8MYZ5 107 aa1.19□□□□□ -2.22
RFC3-203ENST00000616236 WFDC2Q14508 124 aa1.19□□□□□ -2.22
RFC3-203ENST00000616236 DIP2BQ9P265 1576 aa1.18□□□□□ -2.22
RFC3-203ENST00000616236 GOLGA4Q13439 2230 aaKnown RBP1.18□□□□□ -2.22
RFC3-203ENST00000616236 LINC00959A0A1B0GUT2 108 aa1.18□□□□□ -2.22
RFC3-203ENST00000616236 I3L2K1 104 aa1.18□□□□□ -2.22
RFC3-203ENST00000616236 FBN3Q75N90 2809 aa1.18□□□□□ -2.22
RFC3-203ENST00000616236 TMEM131LA2VDJ0 1609 aa1.18□□□□□ -2.22
RFC3-203ENST00000616236 ERVK-7P63135 1459 aa1.18□□□□□ -2.22
RFC3-203ENST00000616236 PLCE1Q9P212 2302 aa1.17□□□□□ -2.22
RFC3-203ENST00000616236 TULP4Q9NRJ4 1543 aa1.17□□□□□ -2.22
RFC3-203ENST00000616236 UBE2D4Q9Y2X8 147 aa1.17□□□□□ -2.22
RFC3-203ENST00000616236 TTC28Q96AY4 2481 aa1.16□□□□□ -2.22
RFC3-203ENST00000616236 TRBV7-4A0A0J9YYF1 115 aa1.16□□□□□ -2.22
RFC3-203ENST00000616236 LINC00643Q86TS7 51 aa1.16□□□□□ -2.22
RFC3-203ENST00000616236 PKD1L3Q7Z443 1732 aa1.15□□□□□ -2.22
RFC3-203ENST00000616236 FBN2P35556 2912 aa1.15□□□□□ -2.23
RFC3-203ENST00000616236 MYMXA0A1B0GTQ4 84 aa1.15□□□□□ -2.23
RFC3-203ENST00000616236 ADIRFQ15847 76 aa1.15□□□□□ -2.23
RFC3-203ENST00000616236 ST20Q9HBF5 79 aa1.15□□□□□ -2.23
RFC3-203ENST00000616236 ANKRD17O75179 2603 aaKnown RBP1.15□□□□□ -2.23
RFC3-203ENST00000616236 ALKQ9UM73 1620 aa1.15□□□□□ -2.23
RFC3-203ENST00000616236 DCAF1Q9Y4B6 1507 aa1.15□□□□□ -2.23
RFC3-203ENST00000616236 KANTRA0A1W2PQU2 76 aa1.14□□□□□ -2.23
RFC3-203ENST00000616236 KRTAP19-3Q7Z4W3 81 aa1.14□□□□□ -2.23
RFC3-203ENST00000616236 FRAS1Q86XX4 4008 aa1.14□□□□□ -2.23
RFC3-203ENST00000616236 SAMD9Q5K651 1589 aa1.13□□□□□ -2.23
RFC3-203ENST00000616236 KIF20BQ96Q89 1820 aa1.13□□□□□ -2.23
RFC3-203ENST00000616236 ACYP1P07311 99 aa1.13□□□□□ -2.23
RFC3-203ENST00000616236 IGLC2P0DOY2 106 aa1.13□□□□□ -2.23
RFC3-203ENST00000616236 IGLC3P0DOY3 106 aa1.13□□□□□ -2.23
RFC3-203ENST00000616236 PLGLAQ15195 96 aa1.13□□□□□ -2.23
RFC3-203ENST00000616236 PIGYQ3MUY2 71 aa1.13□□□□□ -2.23
RFC3-203ENST00000616236 ZNF469Q96JG9 3925 aaPredicted RBP1.12□□□□□ -2.23
RFC3-203ENST00000616236 Q8IZM0 81 aa1.12□□□□□ -2.23
RFC3-203ENST00000616236 BIVM-ERCC5R4GMW8 1640 aa1.11□□□□□ -2.23
RFC3-203ENST00000616236 CRCT1Q9UGL9 99 aa1.11□□□□□ -2.23
RFC3-203ENST00000616236 SETBP1Q9Y6X0 1596 aa1.11□□□□□ -2.23
RFC3-203ENST00000616236 KIAA0556O60303 1618 aa1.11□□□□□ -2.23
RFC3-203ENST00000616236 POLQO75417 2590 aa1.1□□□□□ -2.23
RFC3-203ENST00000616236 DOPEY2Q9Y3R5 2298 aa1.1□□□□□ -2.23
RFC3-203ENST00000616236 FXYD6-FXYD2A0A087WZ82 144 aa1.1□□□□□ -2.23
RFC3-203ENST00000616236 SLIT1O75093 1534 aa1.1□□□□□ -2.23
RFC3-203ENST00000616236 KDM5DQ9BY66 1539 aa1.1□□□□□ -2.23
RFC3-203ENST00000616236 F8P00451 2351 aa1.09□□□□□ -2.23
RFC3-203ENST00000616236 C2CD3Q4AC94 2353 aa1.09□□□□□ -2.23
RFC3-203ENST00000616236 ATP7BP35670 1465 aa1.09□□□□□ -2.24
RFC3-203ENST00000616236 URB1O60287 2271 aaKnown RBP1.09□□□□□ -2.24
RFC3-203ENST00000616236 CEBPZOSA8MTT3 80 aa1.08□□□□□ -2.24
RFC3-203ENST00000616236 DEFB123Q8N688 67 aa1.08□□□□□ -2.24
RFC3-203ENST00000616236 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP1.08□□□□□ -2.24
RFC3-203ENST00000616236 USF3Q68DE3 2245 aa1.08□□□□□ -2.24
RFC3-203ENST00000616236 RGPD1P0DJD0 1748 aa1.07□□□□□ -2.24
RFC3-203ENST00000616236 A0A1B0GUT8 65 aa1.07□□□□□ -2.24
RFC3-203ENST00000616236 NOTCH1P46531 2555 aa1.07□□□□□ -2.24
RFC3-203ENST00000616236 BDP1A6H8Y1 2624 aa1.07□□□□□ -2.24
RFC3-203ENST00000616236 APCP25054 2843 aa1.07□□□□□ -2.24
RFC3-203ENST00000616236 LRRC37AA6NMS7 1700 aa1.06□□□□□ -2.24
RFC3-203ENST00000616236 SPTBN2O15020 2390 aa1.06□□□□□ -2.24
RFC3-203ENST00000616236 H3BUT2 72 aa1.06□□□□□ -2.24
RFC3-203ENST00000616236 GPR98Q8WXG9 6306 aa1.06□□□□□ -2.24
RFC3-203ENST00000616236 RGPD2P0DJD1 1756 aa1.06□□□□□ -2.24
RFC3-203ENST00000616236 RRBP1Q9P2E9 1410 aaKnown RBP1.06□□□□□ -2.24
RFC3-203ENST00000616236 LRRC9Q6ZRR7 1453 aa1.05□□□□□ -2.24
RFC3-203ENST00000616236 DEFB112Q30KQ8 113 aa1.05□□□□□ -2.24
RFC3-203ENST00000616236 BVES-AS1Q5T3Y7 98 aa1.05□□□□□ -2.24
RFC3-203ENST00000616236 ABCA12Q86UK0 2595 aa1.05□□□□□ -2.24
RFC3-203ENST00000616236 LTN1O94822 1766 aa1.03□□□□□ -2.24
RFC3-203ENST00000616236 COL14A1Q05707 1796 aaKnown RBP1.03□□□□□ -2.24
RFC3-203ENST00000616236 K7EQZ3 153 aa1.03□□□□□ -2.24
RFC3-203ENST00000616236 SPINK6Q6UWN8 80 aa1.03□□□□□ -2.24
RFC3-203ENST00000616236 UNC79Q9P2D8 2635 aa1.03□□□□□ -2.24
RFC3-203ENST00000616236 LRRC7Q96NW7 1537 aa1.03□□□□□ -2.24
RFC3-203ENST00000616236 LRRIQ1Q96JM4 1722 aa1.03□□□□□ -2.24
RFC3-203ENST00000616236 FCGBPQ9Y6R7 5405 aaPredicted RBP1.03□□□□□ -2.25
RFC3-203ENST00000616236 KRTAP2-3P0C7H8 128 aa1.02□□□□□ -2.25
RFC3-203ENST00000616236 KRTAP2-4Q9BYR9 128 aa1.02□□□□□ -2.25
RFC3-203ENST00000616236 KRTAP2-1Q9BYU5 128 aa1.02□□□□□ -2.25
RFC3-203ENST00000616236 CELSR2Q9HCU4 2923 aa1.02□□□□□ -2.25
RFC3-203ENST00000616236 ANK2Q01484 3957 aa1.01□□□□□ -2.25
RFC3-203ENST00000616236 UBR3Q6ZT12 1888 aa1.01□□□□□ -2.25
RFC3-203ENST00000616236 FMN2Q9NZ56 1722 aa1.01□□□□□ -2.25
RFC3-203ENST00000616236 CFAP74Q9C0B2 1584 aa1.01□□□□□ -2.25
RFC3-203ENST00000616236 MAP3K1Q13233 1512 aa1.01□□□□□ -2.25
RFC3-203ENST00000616236 ZNF292O60281 2723 aa1.01□□□□□ -2.25
RFC3-203ENST00000616236 PRH1P02810 166 aa1.01□□□□□ -2.25
RFC3-203ENST00000616236 CHD9Q3L8U1 2897 aa1.01□□□□□ -2.25
RFC3-203ENST00000616236 TSC2P49815 1807 aa1.01□□□□□ -2.25
RFC3-203ENST00000616236 QSER1Q2KHR3 1735 aa1.01□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms