RNA–Protein interactions for RNA: ENST00000614051.1

CCL3-206, Transcript of C-C motif chemokine ligand 3, humanhuman

TSL 1 (best)

Gene CCL3, Length 1,494 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3-206ENST00000614051 VAMP8Q9BV40 100 aa10.18□□□□□ -0.78
CCL3-206ENST00000614051 ZNF561-AS1K7EIQ3 104 aa10.17□□□□□ -0.78
CCL3-206ENST00000614051 PRSS2P07478 247 aa10.17□□□□□ -0.78
CCL3-206ENST00000614051 C6orf226Q5I0X4 101 aa10.17□□□□□ -0.78
CCL3-206ENST00000614051 Q8IZM0 81 aa10.17□□□□□ -0.78
CCL3-206ENST00000614051 TTTY13Q9BZ97 58 aa10.17□□□□□ -0.78
CCL3-206ENST00000614051 J3QQQ9 107 aa10.17□□□□□ -0.78
CCL3-206ENST00000614051 SMIM6P0DI80 62 aa10.17□□□□□ -0.78
CCL3-206ENST00000614051 NMUP48645 174 aa10.17□□□□□ -0.78
CCL3-206ENST00000614051 SPATA45Q537H7 98 aa10.17□□□□□ -0.78
CCL3-206ENST00000614051 NTN5Q8WTR8 489 aaPredicted RBP10.17□□□□□ -0.78
CCL3-206ENST00000614051 PLEKHB2Q96CS7 222 aa10.17□□□□□ -0.78
CCL3-206ENST00000614051 FAT2Q9NYQ8 4349 aa10.16□□□□□ -0.78
CCL3-206ENST00000614051 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.16□□□□□ -0.78
CCL3-206ENST00000614051 SLPIP03973 132 aa10.16□□□□□ -0.78
CCL3-206ENST00000614051 LGALS3P17931 250 aaKnown RBP10.15□□□□□ -0.78
CCL3-206ENST00000614051 FUSP35637 526 aaKnown RBP eCLIP10.15□□□□□ -0.78
CCL3-206ENST00000614051 C10orf25Q5T742 122 aa10.15□□□□□ -0.78
CCL3-206ENST00000614051 PCP2Q8IVA1 136 aa10.15□□□□□ -0.78
CCL3-206ENST00000614051 UNQ6190/PRO20217Q6UXQ8 127 aa10.14□□□□□ -0.79
CCL3-206ENST00000614051 Q8N814 137 aa10.14□□□□□ -0.79
CCL3-206ENST00000614051 CKS1BP61024 79 aa10.13□□□□□ -0.79
CCL3-206ENST00000614051 C14orf177Q52M58 125 aa10.13□□□□□ -0.79
CCL3-206ENST00000614051 TP73-AS1Q9UF72 201 aa10.13□□□□□ -0.79
CCL3-206ENST00000614051 NDUFA12Q9UI09 145 aa10.13□□□□□ -0.79
CCL3-206ENST00000614051 DNAH11Q96DT5 4516 aa10.12□□□□□ -0.79
CCL3-206ENST00000614051 Q6ZRU5 148 aa10.12□□□□□ -0.79
CCL3-206ENST00000614051 ZNF625Q96I27 306 aaPredicted RBP10.12□□□□□ -0.79
CCL3-206ENST00000614051 C2orf48Q96LS8 159 aa10.12□□□□□ -0.79
CCL3-206ENST00000614051 CAMK2N2Q96S95 79 aa10.12□□□□□ -0.79
CCL3-206ENST00000614051 C14orf144Q96I85 54 aa10.11□□□□□ -0.79
CCL3-206ENST00000614051 C12orf57Q99622 126 aa10.11□□□□□ -0.79
CCL3-206ENST00000614051 NDUFA1O15239 70 aa10.1□□□□□ -0.79
CCL3-206ENST00000614051 S100A12P80511 92 aa10.1□□□□□ -0.79
CCL3-206ENST00000614051 SYCNQ0VAF6 134 aa10.1□□□□□ -0.79
CCL3-206ENST00000614051 C9orf116Q5BN46 136 aaPredicted RBP10.1□□□□□ -0.79
CCL3-206ENST00000614051 PKD1P98161 4303 aa10.1□□□□□ -0.79
CCL3-206ENST00000614051 ZNF815PA8K554 130 aa10.1□□□□□ -0.79
CCL3-206ENST00000614051 C6orf48Q9UBA6 75 aa10.1□□□□□ -0.79
CCL3-206ENST00000614051 MYMXA0A1B0GTQ4 84 aa10.09□□□□□ -0.79
CCL3-206ENST00000614051 CXCL5P42830 114 aa10.09□□□□□ -0.79
CCL3-206ENST00000614051 LINC00518Q8N0U6 118 aa10.09□□□□□ -0.79
CCL3-206ENST00000614051 CARD19Q96LW7 228 aa10.09□□□□□ -0.79
CCL3-206ENST00000614051 COX8AP10176 69 aa10.08□□□□□ -0.8
CCL3-206ENST00000614051 KRTAP10-2P60368 255 aa10.08□□□□□ -0.8
CCL3-206ENST00000614051 CNBPP62633 177 aaKnown RBP10.07□□□□□ -0.8
CCL3-206ENST00000614051 LINC01620Q4KN68 170 aa10.07□□□□□ -0.8
CCL3-206ENST00000614051 LINC00336Q6ZUF6 198 aa10.07□□□□□ -0.8
CCL3-206ENST00000614051 PRO1933Q9H354 126 aa10.07□□□□□ -0.8
CCL3-206ENST00000614051 HECTD4Q9Y4D8 3996 aa10.07□□□□□ -0.8
CCL3-206ENST00000614051 A0A0J9YXY3 114 aa10.06□□□□□ -0.8
CCL3-206ENST00000614051 F8WDY8 70 aa10.06□□□□□ -0.8
CCL3-206ENST00000614051 A0A0U1RRA0 63 aa10.05□□□□□ -0.8
CCL3-206ENST00000614051 BOD1L2Q8IYS8 172 aa10.05□□□□□ -0.8
CCL3-206ENST00000614051 TRBV30A0A0K0K1B3 111 aa10.04□□□□□ -0.8
CCL3-206ENST00000614051 PFN2P35080 140 aa10.04□□□□□ -0.8
CCL3-206ENST00000614051 HERV-K104P63124 156 aa10.04□□□□□ -0.8
CCL3-206ENST00000614051 IGLV5-52A0A0A0MRZ9 124 aa10.04□□□□□ -0.8
CCL3-206ENST00000614051 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.04□□□□□ -0.8
CCL3-206ENST00000614051 SMIM13P0DJ93 91 aa10.04□□□□□ -0.8
CCL3-206ENST00000614051 MEIG1Q5JSS6 88 aa10.04□□□□□ -0.8
CCL3-206ENST00000614051 SFTA2Q6UW10 78 aa10.04□□□□□ -0.8
CCL3-206ENST00000614051 ERG28Q9UKR5 140 aa10.04□□□□□ -0.8
CCL3-206ENST00000614051 SLC25A34Q6PIV7 304 aa10.03□□□□□ -0.8
CCL3-206ENST00000614051 SCGB1D4Q6XE38 83 aa10.03□□□□□ -0.8
CCL3-206ENST00000614051 A0A1B0GVY2 172 aa10.02□□□□□ -0.81
CCL3-206ENST00000614051 RNF151Q2KHN1 245 aa10.02□□□□□ -0.81
CCL3-206ENST00000614051 C9orf163Q8N9P6 203 aa10.02□□□□□ -0.81
CCL3-206ENST00000614051 DLEU1O43261 78 aa10.01□□□□□ -0.81
CCL3-206ENST00000614051 LINC00158P58513 81 aa10.01□□□□□ -0.81
CCL3-206ENST00000614051 ADAMTSL4-AS1Q5T5F5 129 aa10.01□□□□□ -0.81
CCL3-206ENST00000614051 DAND5Q8N907 189 aa10.01□□□□□ -0.81
CCL3-206ENST00000614051 DNAH5Q8TE73 4624 aa10.01□□□□□ -0.81
CCL3-206ENST00000614051 LITAFQ99732 161 aa10□□□□□ -0.81
CCL3-206ENST00000614051 RPL18AQ02543 176 aaKnown RBP9.99□□□□□ -0.81
CCL3-206ENST00000614051 Q6ZRP5 223 aa9.99□□□□□ -0.81
CCL3-206ENST00000614051 GAGE2EQ4V326 116 aa9.98□□□□□ -0.81
CCL3-206ENST00000614051 C2orf91Q6ZV80 131 aa9.98□□□□□ -0.81
CCL3-206ENST00000614051 UQCR10Q9UDW1 63 aa9.98□□□□□ -0.81
CCL3-206ENST00000614051 GAGE2DQ9UEU5 116 aa9.98□□□□□ -0.81
CCL3-206ENST00000614051 LOC107984640A0A0U1RRK4 108 aa9.98□□□□□ -0.81
CCL3-206ENST00000614051 NDUFC2-KCTD14E9PQ53 114 aa9.98□□□□□ -0.81
CCL3-206ENST00000614051 SDIM1Q6ZPB5 146 aa9.98□□□□□ -0.81
CCL3-206ENST00000614051 MIR7-3HGQ8N6C7 128 aa9.98□□□□□ -0.81
CCL3-206ENST00000614051 TLX1NBP0CAT3 122 aa9.97□□□□□ -0.81
CCL3-206ENST00000614051 NPC2P61916 151 aa9.97□□□□□ -0.81
CCL3-206ENST00000614051 GAGE2BQ13066 116 aa9.97□□□□□ -0.81
CCL3-206ENST00000614051 CIRBPQ14011 172 aaKnown RBP9.97□□□□□ -0.81
CCL3-206ENST00000614051 COX17Q14061 63 aa9.97□□□□□ -0.81
CCL3-206ENST00000614051 KRTAP17-1Q9BYP8 105 aa9.97□□□□□ -0.81
CCL3-206ENST00000614051 A0A096LNI7 61 aa9.96□□□□□ -0.82
CCL3-206ENST00000614051 TMEM238LA0A1B0GVL6 79 aa9.96□□□□□ -0.82
CCL3-206ENST00000614051 EIF4EBP3O60516 100 aaPredicted RBP9.96□□□□□ -0.82
CCL3-206ENST00000614051 TIMM17BO60830 172 aa9.96□□□□□ -0.82
CCL3-206ENST00000614051 MIEN1Q9BRT3 115 aa9.96□□□□□ -0.82
CCL3-206ENST00000614051 XAGE1AQ9HD64 81 aa9.96□□□□□ -0.82
CCL3-206ENST00000614051 LINC00587B1AMM8 73 aa9.95□□□□□ -0.82
CCL3-206ENST00000614051 CHTF8P0CG12 524 aa9.95□□□□□ -0.82
CCL3-206ENST00000614051 SND1-IT1Q9HBX3 110 aa9.95□□□□□ -0.82
CCL3-206ENST00000614051 PKHD1P08F94 4074 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms