RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 KRTAP10-4P60372 401 aaPredicted RBP7.76□□□□□ -1.17
CBWD3-208ENST00000612050 FAT1Q14517 4588 aa7.76□□□□□ -1.17
CBWD3-208ENST00000612050 TINCRA0A1B0GVN0 87 aa7.75□□□□□ -1.17
CBWD3-208ENST00000612050 HBDP02042 147 aa7.75□□□□□ -1.17
CBWD3-208ENST00000612050 NDUFA6P56556 154 aa7.75□□□□□ -1.17
CBWD3-208ENST00000612050 C9orf116Q5BN46 136 aaPredicted RBP7.75□□□□□ -1.17
CBWD3-208ENST00000612050 C6orf48Q9UBA6 75 aa7.75□□□□□ -1.17
CBWD3-208ENST00000612050 CDKN2A-AS1Q9UH64 79 aa7.75□□□□□ -1.17
CBWD3-208ENST00000612050 NDUFC2-KCTD14E9PQ53 114 aa7.74□□□□□ -1.17
CBWD3-208ENST00000612050 ATP5LO75964 103 aa7.74□□□□□ -1.17
CBWD3-208ENST00000612050 PRR3P79522 188 aaKnown RBP7.74□□□□□ -1.17
CBWD3-208ENST00000612050 GAGE2EQ4V326 116 aa7.74□□□□□ -1.17
CBWD3-208ENST00000612050 C18orf32Q8TCD1 76 aa7.74□□□□□ -1.17
CBWD3-208ENST00000612050 GAGE2DQ9UEU5 116 aa7.74□□□□□ -1.17
CBWD3-208ENST00000612050 FLG2Q5D862 2391 aaPredicted RBP7.73□□□□□ -1.17
CBWD3-208ENST00000612050 KIAA0087Q14695 138 aa7.73□□□□□ -1.17
CBWD3-208ENST00000612050 PDZD11Q5EBL8 140 aa7.73□□□□□ -1.17
CBWD3-208ENST00000612050 C10orf25Q5T742 122 aa7.73□□□□□ -1.17
CBWD3-208ENST00000612050 C2orf82Q6UX34 121 aa7.73□□□□□ -1.17
CBWD3-208ENST00000612050 CST9LQ9H4G1 147 aa7.73□□□□□ -1.17
CBWD3-208ENST00000612050 F8VRH5 84 aa7.72□□□□□ -1.17
CBWD3-208ENST00000612050 TMEM238LA0A1B0GVL6 79 aa7.71□□□□□ -1.17
CBWD3-208ENST00000612050 REG3GQ6UW15 175 aa7.71□□□□□ -1.17
CBWD3-208ENST00000612050 A0A1W2PNN7 141 aa7.7□□□□□ -1.18
CBWD3-208ENST00000612050 SPINK6Q6UWN8 80 aa7.7□□□□□ -1.18
CBWD3-208ENST00000612050 FAM19A5Q7Z5A7 132 aaPredicted RBP7.7□□□□□ -1.18
CBWD3-208ENST00000612050 COX7B2Q8TF08 81 aa7.7□□□□□ -1.18
CBWD3-208ENST00000612050 DMBT1Q9UGM3 2413 aaPredicted RBP7.7□□□□□ -1.18
CBWD3-208ENST00000612050 UBE2BP63146 152 aa7.69□□□□□ -1.18
CBWD3-208ENST00000612050 CHCHD1Q96BP2 118 aaKnown RBP7.69□□□□□ -1.18
CBWD3-208ENST00000612050 IGLV5-45A0A087WSX0 123 aa7.69□□□□□ -1.18
CBWD3-208ENST00000612050 SMIM1B2RUZ4 78 aa7.69□□□□□ -1.18
CBWD3-208ENST00000612050 HNRNPA3P51991 378 aaKnown RBP7.69□□□□□ -1.18
CBWD3-208ENST00000612050 SERTAD4-AS1Q5TG53 156 aa7.69□□□□□ -1.18
CBWD3-208ENST00000612050 BAGE3Q86Y29 109 aa7.69□□□□□ -1.18
CBWD3-208ENST00000612050 M0QXV9 152 aa7.68□□□□□ -1.18
CBWD3-208ENST00000612050 HSBP1O75506 76 aa7.68□□□□□ -1.18
CBWD3-208ENST00000612050 SPINK8P0C7L1 97 aa7.68□□□□□ -1.18
CBWD3-208ENST00000612050 PHF5AQ7RTV0 110 aaKnown RBP7.68□□□□□ -1.18
CBWD3-208ENST00000612050 IGLC3P0DOY3 106 aa7.67□□□□□ -1.18
CBWD3-208ENST00000612050 PMCHL1Q16048 86 aa7.67□□□□□ -1.18
CBWD3-208ENST00000612050 C1orf137Q5JT78 98 aa7.67□□□□□ -1.18
CBWD3-208ENST00000612050 SFTA2Q6UW10 78 aa7.67□□□□□ -1.18
CBWD3-208ENST00000612050 LBHQ53QV2 105 aaPredicted RBP7.66□□□□□ -1.18
CBWD3-208ENST00000612050 TMEM170BQ5T4T1 132 aa7.66□□□□□ -1.18
CBWD3-208ENST00000612050 CBLN2Q8IUK8 224 aa7.66□□□□□ -1.18
CBWD3-208ENST00000612050 PSORS1C2Q9UIG4 136 aa7.66□□□□□ -1.18
CBWD3-208ENST00000612050 FAM168BA1KXE4 195 aa7.65□□□□□ -1.18
CBWD3-208ENST00000612050 CHTOPQ9Y3Y2 248 aaKnown RBP7.65□□□□□ -1.18
CBWD3-208ENST00000612050 A0A096LNJ9 63 aa7.64□□□□□ -1.19
CBWD3-208ENST00000612050 IFI27L1Q96BM0 104 aa7.64□□□□□ -1.19
CBWD3-208ENST00000612050 URB1-AS1Q96HZ7 61 aa7.64□□□□□ -1.19
CBWD3-208ENST00000612050 YPEL4Q96NS1 127 aa7.64□□□□□ -1.19
CBWD3-208ENST00000612050 SLC7A5P1Q8MH63 180 aa7.63□□□□□ -1.19
CBWD3-208ENST00000612050 XAGE1AQ9HD64 81 aa7.63□□□□□ -1.19
CBWD3-208ENST00000612050 TRGC2P03986 189 aa7.62□□□□□ -1.19
CBWD3-208ENST00000612050 ZNF22P17026 224 aaPredicted RBP7.62□□□□□ -1.19
CBWD3-208ENST00000612050 C9orf129Q5T035 196 aaKnown RBP7.62□□□□□ -1.19
CBWD3-208ENST00000612050 DIRC1Q969H9 104 aa7.62□□□□□ -1.19
CBWD3-208ENST00000612050 MYCBP2O75592 4640 aa7.61□□□□□ -1.19
CBWD3-208ENST00000612050 TRAV12-1A0A0B4J245 112 aa7.61□□□□□ -1.19
CBWD3-208ENST00000612050 NKAPP1Q8N9T2 125 aa7.61□□□□□ -1.19
CBWD3-208ENST00000612050 IGLV7-43P04211 117 aa7.61□□□□□ -1.19
CBWD3-208ENST00000612050 LINC01600Q96MT4 127 aa7.61□□□□□ -1.19
CBWD3-208ENST00000612050 IGLV5-39A0A0G2JS06 123 aa7.6□□□□□ -1.19
CBWD3-208ENST00000612050 C11orf86A6NJI1 115 aa7.6□□□□□ -1.19
CBWD3-208ENST00000612050 NUPR1O60356 82 aa7.6□□□□□ -1.19
CBWD3-208ENST00000612050 LEPROTL1O95214 131 aa7.6□□□□□ -1.19
CBWD3-208ENST00000612050 PFN2P35080 140 aa7.6□□□□□ -1.19
CBWD3-208ENST00000612050 SRSF9Q13242 221 aaKnown RBP eCLIP7.6□□□□□ -1.19
CBWD3-208ENST00000612050 COX17Q14061 63 aa7.6□□□□□ -1.19
CBWD3-208ENST00000612050 ODF1Q14990 250 aa7.6□□□□□ -1.19
CBWD3-208ENST00000612050 MRPL55Q7Z7F7 128 aaKnown RBP7.6□□□□□ -1.19
CBWD3-208ENST00000612050 TP73-AS1Q9UF72 201 aa7.6□□□□□ -1.19
CBWD3-208ENST00000612050 HSPB8Q9UJY1 196 aa7.6□□□□□ -1.19
CBWD3-208ENST00000612050 C22orf24Q9Y442 160 aa7.6□□□□□ -1.19
CBWD3-208ENST00000612050 EIF4EBP3O60516 100 aaPredicted RBP7.59□□□□□ -1.19
CBWD3-208ENST00000612050 ATP6V1G1O75348 118 aa7.59□□□□□ -1.19
CBWD3-208ENST00000612050 H0Y8G0 127 aa7.58□□□□□ -1.2
CBWD3-208ENST00000612050 RPL24P83731 157 aaKnown RBP7.58□□□□□ -1.2
CBWD3-208ENST00000612050 ERG28Q9UKR5 140 aa7.58□□□□□ -1.2
CBWD3-208ENST00000612050 PLA2G2DQ9UNK4 145 aa7.58□□□□□ -1.2
CBWD3-208ENST00000612050 FAM19A2Q8N3H0 131 aa7.57□□□□□ -1.2
CBWD3-208ENST00000612050 LINC00587B1AMM8 73 aa7.56□□□□□ -1.2
CBWD3-208ENST00000612050 SERF1AO75920 110 aa7.56□□□□□ -1.2
CBWD3-208ENST00000612050 PKHD1L1Q86WI1 4243 aa7.55□□□□□ -1.2
CBWD3-208ENST00000612050 H0Y9J4 135 aa7.55□□□□□ -1.2
CBWD3-208ENST00000612050 PLNP26678 52 aa7.55□□□□□ -1.2
CBWD3-208ENST00000612050 HERVK_113P61574 105 aa7.55□□□□□ -1.2
CBWD3-208ENST00000612050 ZNF625Q96I27 306 aaPredicted RBP7.55□□□□□ -1.2
CBWD3-208ENST00000612050 TMEM223A0PJW6 202 aa7.54□□□□□ -1.2
CBWD3-208ENST00000612050 MT1HL1P0DM35 61 aa7.54□□□□□ -1.2
CBWD3-208ENST00000612050 RPL28P46779 137 aaKnown RBP7.54□□□□□ -1.2
CBWD3-208ENST00000612050 LINC00158P58513 81 aa7.54□□□□□ -1.2
CBWD3-208ENST00000612050 HERV-K104P63124 156 aa7.54□□□□□ -1.2
CBWD3-208ENST00000612050 MEIG1Q5JSS6 88 aa7.54□□□□□ -1.2
CBWD3-208ENST00000612050 KRTAP7-1Q8IUC3 87 aa7.54□□□□□ -1.2
CBWD3-208ENST00000612050 COLCA2A8K830 154 aa7.53□□□□□ -1.2
CBWD3-208ENST00000612050 MAP1LC3CQ9BXW4 147 aa7.53□□□□□ -1.2
CBWD3-208ENST00000612050 IGLV5-37A0A075B6J1 123 aa7.52□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms