RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 ORMDL1Q9P0S3 153 aa4.51□□□□□ -1.69
SNX13-213ENST00000611725 CAMK2N2Q96S95 79 aa4.5□□□□□ -1.69
SNX13-213ENST00000611725 C1orf43Q9BWL3 253 aa4.5□□□□□ -1.69
SNX13-213ENST00000611725 FAM240AA0A1B0GVK7 77 aa4.5□□□□□ -1.69
SNX13-213ENST00000611725 KRTAP1-3Q8IUG1 177 aa4.49□□□□□ -1.69
SNX13-213ENST00000611725 DEFB121Q5J5C9 76 aa4.49□□□□□ -1.69
SNX13-213ENST00000611725 LINC00643Q86TS7 51 aa4.49□□□□□ -1.69
SNX13-213ENST00000611725 Q8IZM0 81 aa4.49□□□□□ -1.69
SNX13-213ENST00000611725 GIG44P09565 113 aaPredicted RBP4.49□□□□□ -1.69
SNX13-213ENST00000611725 HIST1H4AP62805 103 aaKnown RBP4.49□□□□□ -1.69
SNX13-213ENST00000611725 RPL18AQ02543 176 aaKnown RBP4.49□□□□□ -1.69
SNX13-213ENST00000611725 Q6Q795 121 aa4.49□□□□□ -1.69
SNX13-213ENST00000611725 IGKV2D-24A0A075B6R9 120 aa4.48□□□□□ -1.69
SNX13-213ENST00000611725 A0A1B0GUV1 79 aa4.48□□□□□ -1.69
SNX13-213ENST00000611725 B5MCH6 92 aa4.48□□□□□ -1.69
SNX13-213ENST00000611725 EIF4EBP3O60516 100 aaPredicted RBP4.48□□□□□ -1.69
SNX13-213ENST00000611725 SOSTDC1Q6X4U4 206 aa4.48□□□□□ -1.69
SNX13-213ENST00000611725 UBL5Q9BZL1 73 aa4.48□□□□□ -1.69
SNX13-213ENST00000611725 C19orf73Q9NVV2 129 aa4.48□□□□□ -1.69
SNX13-213ENST00000611725 HIVEP1P15822 2718 aa4.48□□□□□ -1.69
SNX13-213ENST00000611725 RPL28P46779 137 aaKnown RBP4.48□□□□□ -1.69
SNX13-213ENST00000611725 SHISA2Q6UWI4 295 aa4.48□□□□□ -1.69
SNX13-213ENST00000611725 C14orf132Q9NPU4 83 aa4.48□□□□□ -1.69
SNX13-213ENST00000611725 JMJD7-PLA2G4BH0Y9G9 81 aa4.47□□□□□ -1.69
SNX13-213ENST00000611725 IGHV4-30-4P0DP06 118 aa4.47□□□□□ -1.69
SNX13-213ENST00000611725 LINC00337Q8N6G1 96 aa4.47□□□□□ -1.69
SNX13-213ENST00000611725 X6R8D5 127 aa4.47□□□□□ -1.69
SNX13-213ENST00000611725 C6orf99Q4VX62 202 aa4.47□□□□□ -1.69
SNX13-213ENST00000611725 LINC00526Q96FQ7 95 aa4.47□□□□□ -1.69
SNX13-213ENST00000611725 XAGE1AQ9HD64 81 aa4.47□□□□□ -1.69
SNX13-213ENST00000611725 DCHS2Q6V1P9 2916 aa4.47□□□□□ -1.69
SNX13-213ENST00000611725 LELP1Q5T871 98 aa4.47□□□□□ -1.69
SNX13-213ENST00000611725 FAM236AA0A1B0GUQ0 79 aa4.46□□□□□ -1.69
SNX13-213ENST00000611725 FAM236BA0A1B0GV22 79 aa4.46□□□□□ -1.69
SNX13-213ENST00000611725 OXLD1Q5BKU9 147 aa4.46□□□□□ -1.69
SNX13-213ENST00000611725 SMIM11BQ8TCY0 68 aa4.46□□□□□ -1.69
SNX13-213ENST00000611725 KRTAP1-1Q07627 177 aa4.46□□□□□ -1.7
SNX13-213ENST00000611725 CITED1Q99966 193 aa4.46□□□□□ -1.7
SNX13-213ENST00000611725 DCHS1Q96JQ0 3298 aa4.46□□□□□ -1.7
SNX13-213ENST00000611725 HAMPP81172 84 aa4.46□□□□□ -1.7
SNX13-213ENST00000611725 PLAC8L1A1L4L8 177 aa4.46□□□□□ -1.7
SNX13-213ENST00000611725 NDUFV3P56181 108 aaKnown RBP4.46□□□□□ -1.7
SNX13-213ENST00000611725 CSNK1G2-AS1Q8NCQ2 148 aa4.45□□□□□ -1.7
SNX13-213ENST00000611725 CELSR2Q9HCU4 2923 aa4.45□□□□□ -1.7
SNX13-213ENST00000611725 NCR3O14931 201 aa4.45□□□□□ -1.7
SNX13-213ENST00000611725 SLPIP03973 132 aa4.45□□□□□ -1.7
SNX13-213ENST00000611725 UNQ6190/PRO20217Q6UXQ8 127 aa4.45□□□□□ -1.7
SNX13-213ENST00000611725 NKAPP1Q8N9T2 125 aa4.45□□□□□ -1.7
SNX13-213ENST00000611725 IL17DQ8TAD2 202 aa4.45□□□□□ -1.7
SNX13-213ENST00000611725 FAM104AQ969W3 186 aa4.45□□□□□ -1.7
SNX13-213ENST00000611725 HIGD2BQ4VC39 106 aa4.45□□□□□ -1.7
SNX13-213ENST00000611725 FBN2P35556 2912 aa4.45□□□□□ -1.7
SNX13-213ENST00000611725 CYSRT1A8MQ03 144 aa4.45□□□□□ -1.7
SNX13-213ENST00000611725 C9orf153Q5TBE3 101 aa4.44□□□□□ -1.7
SNX13-213ENST00000611725 IGKV3D-7A0A0C4DH55 119 aa4.44□□□□□ -1.7
SNX13-213ENST00000611725 KPRPQ5T749 579 aaPredicted RBP4.44□□□□□ -1.7
SNX13-213ENST00000611725 IMUPQ9GZP8 106 aa4.44□□□□□ -1.7
SNX13-213ENST00000611725 PPDPFQ9H3Y8 114 aa4.44□□□□□ -1.7
SNX13-213ENST00000611725 C11orf45Q8TAV5 145 aa4.43□□□□□ -1.7
SNX13-213ENST00000611725 TMEM256-PLSCR3K7ERE1 68 aa4.43□□□□□ -1.7
SNX13-213ENST00000611725 C9orf116Q5BN46 136 aaPredicted RBP4.43□□□□□ -1.7
SNX13-213ENST00000611725 MUC7Q8TAX7 377 aa4.43□□□□□ -1.7
SNX13-213ENST00000611725 DIRC1Q969H9 104 aa4.43□□□□□ -1.7
SNX13-213ENST00000611725 DEFB131BA0A096LNP1 70 aa4.43□□□□□ -1.7
SNX13-213ENST00000611725 A0A1B0GX51 115 aa4.43□□□□□ -1.7
SNX13-213ENST00000611725 Q6ZQY7 126 aa4.43□□□□□ -1.7
SNX13-213ENST00000611725 RMI2Q96E14 147 aa4.43□□□□□ -1.7
SNX13-213ENST00000611725 PRR3P79522 188 aaKnown RBP4.42□□□□□ -1.7
SNX13-213ENST00000611725 RBM3P98179 157 aaKnown RBP4.42□□□□□ -1.7
SNX13-213ENST00000611725 FAM19A3Q7Z5A8 133 aa4.42□□□□□ -1.7
SNX13-213ENST00000611725 DSCR8Q96T75 97 aa4.42□□□□□ -1.7
SNX13-213ENST00000611725 COX17Q14061 63 aa4.42□□□□□ -1.7
SNX13-213ENST00000611725 WFDC9Q8NEX5 89 aa4.42□□□□□ -1.7
SNX13-213ENST00000611725 MRAPQ8TCY5 172 aa4.42□□□□□ -1.7
SNX13-213ENST00000611725 NHLRC4P0CG21 123 aaPredicted RBP4.41□□□□□ -1.7
SNX13-213ENST00000611725 CELA1Q9UNI1 258 aa4.41□□□□□ -1.7
SNX13-213ENST00000611725 A0A087WYN8 130 aa4.41□□□□□ -1.7
SNX13-213ENST00000611725 hADV29S1A0JD25 119 aa4.41□□□□□ -1.7
SNX13-213ENST00000611725 NDUFC2O95298 119 aa4.41□□□□□ -1.7
SNX13-213ENST00000611725 SYCNQ0VAF6 134 aa4.41□□□□□ -1.7
SNX13-213ENST00000611725 PDE6GP18545 87 aa4.41□□□□□ -1.7
SNX13-213ENST00000611725 Q6ZTC4 211 aa4.41□□□□□ -1.7
SNX13-213ENST00000611725 LINC00612Q8N6U2 182 aa4.41□□□□□ -1.7
SNX13-213ENST00000611725 BAHCC1Q9P281 2608 aa4.41□□□□□ -1.7
SNX13-213ENST00000611725 LINC01561Q8N1V8 128 aa4.41□□□□□ -1.7
SNX13-213ENST00000611725 ATOX1O00244 68 aa4.41□□□□□ -1.7
SNX13-213ENST00000611725 COX7BP24311 80 aa4.41□□□□□ -1.7
SNX13-213ENST00000611725 UBE2DNLQ8IWF7 75 aa4.41□□□□□ -1.7
SNX13-213ENST00000611725 DPH3Q96FX2 82 aa4.41□□□□□ -1.7
SNX13-213ENST00000611725 FAM218AQ96MZ4 157 aa4.4□□□□□ -1.7
SNX13-213ENST00000611725 TRBV7-7A0A0K0K1E9 115 aa4.4□□□□□ -1.7
SNX13-213ENST00000611725 PSCAO43653 123 aa4.4□□□□□ -1.7
SNX13-213ENST00000611725 RETNQ9HD89 108 aa4.4□□□□□ -1.7
SNX13-213ENST00000611725 KLK5Q9Y337 293 aaPredicted RBP4.4□□□□□ -1.71
SNX13-213ENST00000611725 CRYBG3Q68DQ2 2970 aa4.4□□□□□ -1.71
SNX13-213ENST00000611725 SS18L2Q9UHA2 77 aa4.4□□□□□ -1.71
SNX13-213ENST00000611725 KMT2BQ9UMN6 2715 aaPredicted RBP4.4□□□□□ -1.71
SNX13-213ENST00000611725 ZNF73O43830 326 aaPredicted RBP4.4□□□□□ -1.71
SNX13-213ENST00000611725 EGFEM1PQ0D2K5 195 aa4.4□□□□□ -1.71
SNX13-213ENST00000611725 IGKV2-28A0A075B6P5 120 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 124.4 ms