RNA–Protein interactions for RNA: ENST00000609099.1

LINC01396-201, Transcript of long intergenic non-protein coding RNA 1396, humanhuman

TSL 3 BASIC

Gene LINC01396, Length 527 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01396-201ENST00000609099 IGKV2-28A0A075B6P5 120 aa4.16□□□□□ -1.74
LINC01396-201ENST00000609099 TMEM238C9JI98 176 aa4.16□□□□□ -1.74
LINC01396-201ENST00000609099 IGKV2D-28P01615 120 aa4.16□□□□□ -1.74
LINC01396-201ENST00000609099 IGLV6-57P01721 117 aa4.16□□□□□ -1.74
LINC01396-201ENST00000609099 FCER1GP30273 86 aa4.16□□□□□ -1.74
LINC01396-201ENST00000609099 CTXND1A0A1B0GTU2 59 aa4.15□□□□□ -1.75
LINC01396-201ENST00000609099 SSNA1O43805 119 aa4.15□□□□□ -1.75
LINC01396-201ENST00000609099 FHITP49789 147 aa4.15□□□□□ -1.75
LINC01396-201ENST00000609099 RPL37P61927 97 aaKnown RBP4.15□□□□□ -1.75
LINC01396-201ENST00000609099 SERF2P84101 59 aa4.15□□□□□ -1.75
LINC01396-201ENST00000609099 Q5BKY6 102 aa4.15□□□□□ -1.75
LINC01396-201ENST00000609099 CST9LP1Q5W188 147 aa4.15□□□□□ -1.75
LINC01396-201ENST00000609099 Q8NDZ9 215 aa4.15□□□□□ -1.75
LINC01396-201ENST00000609099 TRBV27A0A0K0K1C4 114 aa4.14□□□□□ -1.75
LINC01396-201ENST00000609099 C6orf226Q5I0X4 101 aa4.14□□□□□ -1.75
LINC01396-201ENST00000609099 TMEM126AQ9H061 195 aa4.14□□□□□ -1.75
LINC01396-201ENST00000609099 TNFSF18Q9UNG2 199 aa4.14□□□□□ -1.75
LINC01396-201ENST00000609099 TRBV20OR9-2A0A075B6H5 130 aa4.13□□□□□ -1.75
LINC01396-201ENST00000609099 IGLV5-37A0A075B6J1 123 aa4.13□□□□□ -1.75
LINC01396-201ENST00000609099 M0R378 163 aa4.13□□□□□ -1.75
LINC01396-201ENST00000609099 PAGE4O60829 102 aa4.13□□□□□ -1.75
LINC01396-201ENST00000609099 GIPP09681 153 aaPredicted RBP4.13□□□□□ -1.75
LINC01396-201ENST00000609099 RPL39P62891 51 aaKnown RBP4.13□□□□□ -1.75
LINC01396-201ENST00000609099 FAM231DQ6ZW35 169 aa4.13□□□□□ -1.75
LINC01396-201ENST00000609099 C9orf62Q8N4C0 152 aa4.13□□□□□ -1.75
LINC01396-201ENST00000609099 TIMM21Q9BVV7 248 aa4.13□□□□□ -1.75
LINC01396-201ENST00000609099 NPSP0C0P6 89 aa4.12□□□□□ -1.75
LINC01396-201ENST00000609099 PET100P0DJ07 73 aa4.12□□□□□ -1.75
LINC01396-201ENST00000609099 HBBP68871 147 aa4.12□□□□□ -1.75
LINC01396-201ENST00000609099 MOBPQ13875 183 aa4.12□□□□□ -1.75
LINC01396-201ENST00000609099 KRTAP2-2Q9BYT5 123 aa4.12□□□□□ -1.75
LINC01396-201ENST00000609099 KRTAP2-1Q9BYU5 128 aa4.12□□□□□ -1.75
LINC01396-201ENST00000609099 TOMM7Q9P0U1 55 aa4.12□□□□□ -1.75
LINC01396-201ENST00000609099 IGLV9-49A0A0B4J1Y8 123 aa4.11□□□□□ -1.75
LINC01396-201ENST00000609099 MAP1LC3B2A6NCE7 125 aa4.11□□□□□ -1.75
LINC01396-201ENST00000609099 IFITM10A6NMD0 228 aa4.11□□□□□ -1.75
LINC01396-201ENST00000609099 SMLR1H3BR10 107 aa4.11□□□□□ -1.75
LINC01396-201ENST00000609099 VCYO14598 125 aa4.11□□□□□ -1.75
LINC01396-201ENST00000609099 RPL35P42766 123 aaKnown RBP4.11□□□□□ -1.75
LINC01396-201ENST00000609099 RPL7L1Q6DKI1 246 aaKnown RBP4.11□□□□□ -1.75
LINC01396-201ENST00000609099 MAP1LC3BQ9GZQ8 125 aa4.11□□□□□ -1.75
LINC01396-201ENST00000609099 SMKR1H3BMG3 65 aa4.1□□□□□ -1.75
LINC01396-201ENST00000609099 LINC01561Q8N1V8 128 aa4.1□□□□□ -1.75
LINC01396-201ENST00000609099 LIMD2Q9BT23 127 aa4.1□□□□□ -1.75
LINC01396-201ENST00000609099 F8VRH5 84 aa4.09□□□□□ -1.75
LINC01396-201ENST00000609099 KRTAP5-9P26371 169 aa4.09□□□□□ -1.75
LINC01396-201ENST00000609099 CENPWQ5EE01 88 aa4.09□□□□□ -1.75
LINC01396-201ENST00000609099 NRACQ8N912 160 aa4.09□□□□□ -1.75
LINC01396-201ENST00000609099 ALKBH7Q9BT30 221 aaPredicted RBP4.09□□□□□ -1.75
LINC01396-201ENST00000609099 CHTOPQ9Y3Y2 248 aaKnown RBP4.09□□□□□ -1.75
LINC01396-201ENST00000609099 TRBV20-1A0A075B6N2 111 aa4.08□□□□□ -1.76
LINC01396-201ENST00000609099 FXYD6-FXYD2A0A087WZ82 144 aa4.08□□□□□ -1.76
LINC01396-201ENST00000609099 ZC2HC1BQ5TFG8 222 aa4.08□□□□□ -1.76
LINC01396-201ENST00000609099 Q6ZN92 141 aa4.08□□□□□ -1.76
LINC01396-201ENST00000609099 TMUB2Q71RG4 321 aa4.08□□□□□ -1.76
LINC01396-201ENST00000609099 TIMM17AQ99595 171 aa4.08□□□□□ -1.76
LINC01396-201ENST00000609099 hCG_2014768A0A024R1R8 64 aa4.07□□□□□ -1.76
LINC01396-201ENST00000609099 ARPC5O15511 151 aa4.07□□□□□ -1.76
LINC01396-201ENST00000609099 PFDN1O60925 122 aa4.07□□□□□ -1.76
LINC01396-201ENST00000609099 ZNF345Q14585 488 aa4.07□□□□□ -1.76
LINC01396-201ENST00000609099 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.07□□□□□ -1.76
LINC01396-201ENST00000609099 GAGE2AQ6NT46 116 aa4.07□□□□□ -1.76
LINC01396-201ENST00000609099 AKAP14Q86UN6 197 aa4.07□□□□□ -1.76
LINC01396-201ENST00000609099 Q8IZM0 81 aa4.07□□□□□ -1.76
LINC01396-201ENST00000609099 TCTE3Q8IZS6 198 aa4.07□□□□□ -1.76
LINC01396-201ENST00000609099 C11orf52Q96A22 123 aa4.07□□□□□ -1.76
LINC01396-201ENST00000609099 A0A1B0GV50 99 aa4.06□□□□□ -1.76
LINC01396-201ENST00000609099 HMSDA8MTL9 139 aa4.06□□□□□ -1.76
LINC01396-201ENST00000609099 MRPS36P82909 103 aaKnown RBP4.06□□□□□ -1.76
LINC01396-201ENST00000609099 LINC00483Q53H64 154 aa4.06□□□□□ -1.76
LINC01396-201ENST00000609099 ATP11AUNQ6ZP68 121 aa4.06□□□□□ -1.76
LINC01396-201ENST00000609099 KCNRGQ8N5I3 272 aa4.06□□□□□ -1.76
LINC01396-201ENST00000609099 SPANXA1Q9NS26 97 aa4.06□□□□□ -1.76
LINC01396-201ENST00000609099 K7EN84 100 aa4.05□□□□□ -1.76
LINC01396-201ENST00000609099 PPP1R17O96001 155 aa4.05□□□□□ -1.76
LINC01396-201ENST00000609099 VPREB1P12018 145 aa4.05□□□□□ -1.76
LINC01396-201ENST00000609099 FAM19A3Q7Z5A8 133 aa4.05□□□□□ -1.76
LINC01396-201ENST00000609099 SMCR5Q8TEV8 140 aa4.05□□□□□ -1.76
LINC01396-201ENST00000609099 BIN3Q9NQY0 253 aa4.05□□□□□ -1.76
LINC01396-201ENST00000609099 TCAPO15273 167 aa4.04□□□□□ -1.76
LINC01396-201ENST00000609099 RAB4AP20338 218 aa4.04□□□□□ -1.76
LINC01396-201ENST00000609099 TAGLN2P37802 199 aaKnown RBP4.04□□□□□ -1.76
LINC01396-201ENST00000609099 CXCL5P42830 114 aa4.04□□□□□ -1.76
LINC01396-201ENST00000609099 CCL20P78556 96 aa4.04□□□□□ -1.76
LINC01396-201ENST00000609099 RPL24P83731 157 aaKnown RBP4.04□□□□□ -1.76
LINC01396-201ENST00000609099 AKR1C8PQ5T2L2 129 aa4.04□□□□□ -1.76
LINC01396-201ENST00000609099 C9orf153Q5TBE3 101 aa4.04□□□□□ -1.76
LINC01396-201ENST00000609099 C20orf166-AS1Q96NR2 134 aa4.04□□□□□ -1.76
LINC01396-201ENST00000609099 C6orf99Q4VX62 202 aa4.03□□□□□ -1.76
LINC01396-201ENST00000609099 AMN1Q8IY45 258 aa4.03□□□□□ -1.76
LINC01396-201ENST00000609099 IGLV4-3A0A075B6K6 122 aa4.02□□□□□ -1.77
LINC01396-201ENST00000609099 PPP1R2P9O14990 202 aa4.02□□□□□ -1.77
LINC01396-201ENST00000609099 RAB5BP61020 215 aa4.02□□□□□ -1.77
LINC01396-201ENST00000609099 MED9Q9NWA0 146 aa4.02□□□□□ -1.77
LINC01396-201ENST00000609099 BORCS7-ASMTA0A0B4J1R7 106 aa4.01□□□□□ -1.77
LINC01396-201ENST00000609099 ERC2-IT1O76042 136 aa4.01□□□□□ -1.77
LINC01396-201ENST00000609099 SUMO2P61956 95 aaKnown RBP4.01□□□□□ -1.77
LINC01396-201ENST00000609099 MBD3L1Q8WWY6 194 aa4.01□□□□□ -1.77
LINC01396-201ENST00000609099 BORCS7Q96B45 105 aa4.01□□□□□ -1.77
LINC01396-201ENST00000609099 SMIM12Q96EX1 92 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 134.3 ms