RNA–Protein interactions for RNA: ENST00000609024.5

CHMP4A-211, Transcript of charged multivesicular body protein 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4A, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-211ENST00000609024 GAGE10A6NGK3 116 aa10.06□□□□□ -0.8
CHMP4A-211ENST00000609024 SRP19P09132 144 aaKnown RBP10.06□□□□□ -0.8
CHMP4A-211ENST00000609024 TMEM136Q6ZRR5 245 aa10.05□□□□□ -0.8
CHMP4A-211ENST00000609024 NKAPP1Q8N9T2 125 aa10.05□□□□□ -0.8
CHMP4A-211ENST00000609024 PPDPFQ9H3Y8 114 aa10.05□□□□□ -0.8
CHMP4A-211ENST00000609024 CYSLTR1Q9Y271 337 aa10.05□□□□□ -0.8
CHMP4A-211ENST00000609024 RPL23P62829 140 aaKnown RBP10.04□□□□□ -0.8
CHMP4A-211ENST00000609024 SEC11AP67812 179 aa10.04□□□□□ -0.8
CHMP4A-211ENST00000609024 CTAG1AP78358 180 aa10.04□□□□□ -0.8
CHMP4A-211ENST00000609024 LINC00337Q8N6G1 96 aa10.04□□□□□ -0.8
CHMP4A-211ENST00000609024 PRELID3AQ96N28 172 aa10.04□□□□□ -0.8
CHMP4A-211ENST00000609024 MUC17Q685J3 4493 aa10.04□□□□□ -0.8
CHMP4A-211ENST00000609024 LOC389332A0A1B0GUA5 103 aa10.03□□□□□ -0.8
CHMP4A-211ENST00000609024 CXCL5P42830 114 aa10.03□□□□□ -0.8
CHMP4A-211ENST00000609024 HERVK_113P63121 156 aa10.03□□□□□ -0.8
CHMP4A-211ENST00000609024 GEMIN7Q9H840 131 aaKnown RBP10.03□□□□□ -0.8
CHMP4A-211ENST00000609024 ZC2HC1BQ5TFG8 222 aa10.02□□□□□ -0.81
CHMP4A-211ENST00000609024 NAT8Q9UHE5 227 aa10.02□□□□□ -0.81
CHMP4A-211ENST00000609024 FSIP2Q5CZC0 6907 aa10.02□□□□□ -0.81
CHMP4A-211ENST00000609024 C2orf66Q6UXQ4 117 aa10.01□□□□□ -0.81
CHMP4A-211ENST00000609024 MAP1LC3AQ9H492 121 aa10.01□□□□□ -0.81
CHMP4A-211ENST00000609024 PNRC1Q12796 327 aaPredicted RBP10□□□□□ -0.81
CHMP4A-211ENST00000609024 PAPPA-AS1Q5QFB9 102 aa10□□□□□ -0.81
CHMP4A-211ENST00000609024 AMELXQ99217 191 aa9.99□□□□□ -0.81
CHMP4A-211ENST00000609024 CDKN2A-AS1Q9UH64 79 aa9.99□□□□□ -0.81
CHMP4A-211ENST00000609024 ORMDL2Q53FV1 153 aa9.98□□□□□ -0.81
CHMP4A-211ENST00000609024 LAMTOR2Q9Y2Q5 125 aa9.98□□□□□ -0.81
CHMP4A-211ENST00000609024 IGKV2-28A0A075B6P5 120 aa9.97□□□□□ -0.81
CHMP4A-211ENST00000609024 A0A1B0GXF2 115 aa9.97□□□□□ -0.81
CHMP4A-211ENST00000609024 IGKV2D-28P01615 120 aa9.97□□□□□ -0.81
CHMP4A-211ENST00000609024 NPSP0C0P6 89 aa9.97□□□□□ -0.81
CHMP4A-211ENST00000609024 C4orf48Q5BLP8 95 aa9.97□□□□□ -0.81
CHMP4A-211ENST00000609024 LCE2DQ5TA82 110 aaPredicted RBP9.97□□□□□ -0.81
CHMP4A-211ENST00000609024 KRTAP13-1Q8IUC0 172 aa9.97□□□□□ -0.81
CHMP4A-211ENST00000609024 RAB5BP61020 215 aa9.96□□□□□ -0.82
CHMP4A-211ENST00000609024 SPAG11AQ6PDA7 123 aa9.96□□□□□ -0.82
CHMP4A-211ENST00000609024 FAM19A3Q7Z5A8 133 aa9.96□□□□□ -0.82
CHMP4A-211ENST00000609024 FAM19A1Q7Z5A9 133 aa9.96□□□□□ -0.82
CHMP4A-211ENST00000609024 Q8N8P6 123 aa9.96□□□□□ -0.82
CHMP4A-211ENST00000609024 PRLHP81277 87 aa9.95□□□□□ -0.82
CHMP4A-211ENST00000609024 CRCT1Q9UGL9 99 aa9.95□□□□□ -0.82
CHMP4A-211ENST00000609024 IGLV5-37A0A075B6J1 123 aa9.94□□□□□ -0.82
CHMP4A-211ENST00000609024 PRSS47A8MTI9 375 aa9.94□□□□□ -0.82
CHMP4A-211ENST00000609024 G0S2P27469 103 aa9.94□□□□□ -0.82
CHMP4A-211ENST00000609024 FP248Q71RG6 208 aaPredicted RBP9.94□□□□□ -0.82
CHMP4A-211ENST00000609024 ATP5L2Q7Z4Y8 100 aa9.94□□□□□ -0.82
CHMP4A-211ENST00000609024 COX7B2Q8TF08 81 aa9.94□□□□□ -0.82
CHMP4A-211ENST00000609024 IGIPA6NJ69 53 aa9.92□□□□□ -0.82
CHMP4A-211ENST00000609024 K7EMI3 77 aa9.92□□□□□ -0.82
CHMP4A-211ENST00000609024 PDZD11Q5EBL8 140 aa9.92□□□□□ -0.82
CHMP4A-211ENST00000609024 SEC61BP60468 96 aaKnown RBP9.91□□□□□ -0.82
CHMP4A-211ENST00000609024 PEA15Q15121 130 aa9.91□□□□□ -0.82
CHMP4A-211ENST00000609024 ASB16-AS1Q495Z4 193 aa9.9□□□□□ -0.82
CHMP4A-211ENST00000609024 AKAP14Q86UN6 197 aa9.9□□□□□ -0.82
CHMP4A-211ENST00000609024 CBLN2Q8IUK8 224 aa9.9□□□□□ -0.82
CHMP4A-211ENST00000609024 C3orf22Q8N5N4 141 aa9.9□□□□□ -0.82
CHMP4A-211ENST00000609024 SMIM1B2RUZ4 78 aa9.89□□□□□ -0.83
CHMP4A-211ENST00000609024 ATP5LO75964 103 aa9.89□□□□□ -0.83
CHMP4A-211ENST00000609024 SRSF3P84103 164 aaKnown RBP9.89□□□□□ -0.83
CHMP4A-211ENST00000609024 GNB1LQ9BYB4 327 aa9.89□□□□□ -0.83
CHMP4A-211ENST00000609024 TMEM126AQ9H061 195 aa9.89□□□□□ -0.83
CHMP4A-211ENST00000609024 SCO1O75880 301 aa9.88□□□□□ -0.83
CHMP4A-211ENST00000609024 TIMM17AQ99595 171 aa9.88□□□□□ -0.83
CHMP4A-211ENST00000609024 NXT2Q9NPJ8 142 aaKnown RBP9.88□□□□□ -0.83
CHMP4A-211ENST00000609024 RPL24P83731 157 aaKnown RBP9.87□□□□□ -0.83
CHMP4A-211ENST00000609024 PLEKHB2Q96CS7 222 aa9.87□□□□□ -0.83
CHMP4A-211ENST00000609024 HIGD2AQ9BW72 106 aa9.87□□□□□ -0.83
CHMP4A-211ENST00000609024 TMEM238C9JI98 176 aa9.86□□□□□ -0.83
CHMP4A-211ENST00000609024 PFN2P35080 140 aa9.86□□□□□ -0.83
CHMP4A-211ENST00000609024 TINCRA0A1B0GVN0 87 aa9.85□□□□□ -0.83
CHMP4A-211ENST00000609024 C9JQL5 133 aa9.85□□□□□ -0.83
CHMP4A-211ENST00000609024 KRTAP13-3Q3SY46 172 aa9.85□□□□□ -0.83
CHMP4A-211ENST00000609024 SCGB3A1Q96QR1 104 aa9.85□□□□□ -0.83
CHMP4A-211ENST00000609024 NDUFA12Q9UI09 145 aa9.85□□□□□ -0.83
CHMP4A-211ENST00000609024 A0A1B0GVG6 124 aa9.84□□□□□ -0.83
CHMP4A-211ENST00000609024 SPINK8P0C7L1 97 aa9.84□□□□□ -0.83
CHMP4A-211ENST00000609024 ZNF706Q9Y5V0 76 aaPredicted RBP9.84□□□□□ -0.83
CHMP4A-211ENST00000609024 TOMM6Q96B49 74 aa9.83□□□□□ -0.84
CHMP4A-211ENST00000609024 H3BRM9 83 aa9.82□□□□□ -0.84
CHMP4A-211ENST00000609024 ERASQ7Z444 233 aa9.82□□□□□ -0.84
CHMP4A-211ENST00000609024 M0R378 163 aa9.81□□□□□ -0.84
CHMP4A-211ENST00000609024 DAND5Q8N907 189 aa9.81□□□□□ -0.84
CHMP4A-211ENST00000609024 MRPL18Q9H0U6 180 aaKnown RBP9.81□□□□□ -0.84
CHMP4A-211ENST00000609024 VPREB1P12018 145 aa9.8□□□□□ -0.84
CHMP4A-211ENST00000609024 RAB14P61106 215 aa9.8□□□□□ -0.84
CHMP4A-211ENST00000609024 Q8NBF4 154 aa9.8□□□□□ -0.84
CHMP4A-211ENST00000609024 SPRR4Q96PI1 79 aa9.8□□□□□ -0.84
CHMP4A-211ENST00000609024 IGLV5-45A0A087WSX0 123 aa9.79□□□□□ -0.84
CHMP4A-211ENST00000609024 SPINK1P00995 79 aa9.79□□□□□ -0.84
CHMP4A-211ENST00000609024 SND1-IT1Q9HBX3 110 aa9.79□□□□□ -0.84
CHMP4A-211ENST00000609024 LINC01549A6NIU2 74 aa9.78□□□□□ -0.84
CHMP4A-211ENST00000609024 ERG28Q9UKR5 140 aa9.77□□□□□ -0.85
CHMP4A-211ENST00000609024 hCG_2014768A0A024R1R8 64 aa9.76□□□□□ -0.85
CHMP4A-211ENST00000609024 COX17Q14061 63 aa9.76□□□□□ -0.85
CHMP4A-211ENST00000609024 FAM19A2Q8N3H0 131 aa9.76□□□□□ -0.85
CHMP4A-211ENST00000609024 KRTAP4-1Q9BYQ7 146 aa9.76□□□□□ -0.85
CHMP4A-211ENST00000609024 CST9LQ9H4G1 147 aa9.76□□□□□ -0.85
CHMP4A-211ENST00000609024 MT-ND4LP03901 98 aa9.75□□□□□ -0.85
CHMP4A-211ENST00000609024 ADCYAP1P18509 176 aa9.75□□□□□ -0.85
CHMP4A-211ENST00000609024 PMVKQ15126 192 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms