RNA–Protein interactions for RNA: ENST00000606699.5

NECAB3-220, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 1,022 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-220ENST00000606699 SYCNQ0VAF6 134 aa11.51□□□□□ -0.57
NECAB3-220ENST00000606699 SRSF9Q13242 221 aaKnown RBP eCLIP11.51□□□□□ -0.571e-6■□□□□ 8.9
NECAB3-220ENST00000606699 CARD19Q96LW7 228 aa11.51□□□□□ -0.57
NECAB3-220ENST00000606699 GEMIN7Q9H840 131 aaKnown RBP11.51□□□□□ -0.57
NECAB3-220ENST00000606699 SERF1AO75920 110 aa11.5□□□□□ -0.57
NECAB3-220ENST00000606699 HERVK_113P63121 156 aa11.5□□□□□ -0.57
NECAB3-220ENST00000606699 SEC11AP67812 179 aa11.5□□□□□ -0.57
NECAB3-220ENST00000606699 FAM19A2Q8N3H0 131 aa11.5□□□□□ -0.57
NECAB3-220ENST00000606699 CAMK2N2Q96S95 79 aa11.5□□□□□ -0.57
NECAB3-220ENST00000606699 CDKN2A-AS1Q9UH64 79 aa11.5□□□□□ -0.57
NECAB3-220ENST00000606699 A0A096LNI7 61 aa11.49□□□□□ -0.57
NECAB3-220ENST00000606699 ATP5LO75964 103 aa11.49□□□□□ -0.57
NECAB3-220ENST00000606699 S100A1P23297 94 aa11.49□□□□□ -0.57
NECAB3-220ENST00000606699 Q6ZRP5 223 aa11.49□□□□□ -0.57
NECAB3-220ENST00000606699 TINCRA0A1B0GVN0 87 aa11.48□□□□□ -0.57
NECAB3-220ENST00000606699 C2orf48Q96LS8 159 aa11.48□□□□□ -0.57
NECAB3-220ENST00000606699 LINC01561Q8N1V8 128 aa11.47□□□□□ -0.57
NECAB3-220ENST00000606699 LINC00469Q8N7U9 141 aa11.47□□□□□ -0.57
NECAB3-220ENST00000606699 NUPR1O60356 82 aa11.46□□□□□ -0.57
NECAB3-220ENST00000606699 KIAA0087Q14695 138 aa11.46□□□□□ -0.57
NECAB3-220ENST00000606699 HIST1H2BKO60814 126 aa11.45□□□□□ -0.58
NECAB3-220ENST00000606699 HIST1H2BJP06899 126 aa11.45□□□□□ -0.58
NECAB3-220ENST00000606699 HIST1H2BOP23527 126 aa11.45□□□□□ -0.58
NECAB3-220ENST00000606699 HIST1H2BBP33778 126 aa11.45□□□□□ -0.58
NECAB3-220ENST00000606699 HIST1H2BDP58876 126 aa11.45□□□□□ -0.58
NECAB3-220ENST00000606699 HIST1H2BCP62807 126 aa11.45□□□□□ -0.58
NECAB3-220ENST00000606699 HIST2H2BEQ16778 126 aa11.45□□□□□ -0.58
NECAB3-220ENST00000606699 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.45□□□□□ -0.58
NECAB3-220ENST00000606699 HIST1H2BHQ93079 126 aa11.45□□□□□ -0.58
NECAB3-220ENST00000606699 HIST1H2BNQ99877 126 aa11.45□□□□□ -0.58
NECAB3-220ENST00000606699 HIST1H2BMQ99879 126 aa11.45□□□□□ -0.58
NECAB3-220ENST00000606699 IGLV5-45A0A087WSX0 123 aa11.44□□□□□ -0.58
NECAB3-220ENST00000606699 NDUFA1O15239 70 aa11.44□□□□□ -0.58
NECAB3-220ENST00000606699 IFI27L1Q96BM0 104 aa11.44□□□□□ -0.58
NECAB3-220ENST00000606699 PACRGQ96M98 296 aaPredicted RBP11.44□□□□□ -0.58
NECAB3-220ENST00000606699 TOMM7Q9P0U1 55 aa11.44□□□□□ -0.58
NECAB3-220ENST00000606699 IGLC3P0DOY3 106 aa11.43□□□□□ -0.58
NECAB3-220ENST00000606699 C10orf25Q5T742 122 aa11.43□□□□□ -0.58
NECAB3-220ENST00000606699 UNQ6190/PRO20217Q6UXQ8 127 aa11.43□□□□□ -0.58
NECAB3-220ENST00000606699 C2orf82Q6UX34 121 aa11.42□□□□□ -0.58
NECAB3-220ENST00000606699 SMIM1B2RUZ4 78 aa11.41□□□□□ -0.58
NECAB3-220ENST00000606699 F8WDY8 70 aa11.41□□□□□ -0.58
NECAB3-220ENST00000606699 PRSS2P07478 247 aa11.41□□□□□ -0.58
NECAB3-220ENST00000606699 SPINK8P0C7L1 97 aa11.41□□□□□ -0.58
NECAB3-220ENST00000606699 MRPL35Q9NZE8 188 aaKnown RBP11.41□□□□□ -0.58
NECAB3-220ENST00000606699 LOC107984640A0A0U1RRK4 108 aa11.4□□□□□ -0.58
NECAB3-220ENST00000606699 LEPROTL1O95214 131 aa11.4□□□□□ -0.58
NECAB3-220ENST00000606699 Q8IZM0 81 aa11.4□□□□□ -0.58
NECAB3-220ENST00000606699 C6orf48Q9UBA6 75 aa11.4□□□□□ -0.58
NECAB3-220ENST00000606699 CHTOPQ9Y3Y2 248 aaKnown RBP11.4□□□□□ -0.58
NECAB3-220ENST00000606699 C11orf86A6NJI1 115 aa11.39□□□□□ -0.59
NECAB3-220ENST00000606699 FABP4P15090 132 aa11.39□□□□□ -0.59
NECAB3-220ENST00000606699 ZNF22P17026 224 aaPredicted RBP11.39□□□□□ -0.59
NECAB3-220ENST00000606699 C6orf226Q5I0X4 101 aa11.39□□□□□ -0.59
NECAB3-220ENST00000606699 TRAV12-1A0A0B4J245 112 aa11.38□□□□□ -0.59
NECAB3-220ENST00000606699 H0Y8G0 127 aa11.38□□□□□ -0.59
NECAB3-220ENST00000606699 H3BRM9 83 aa11.38□□□□□ -0.59
NECAB3-220ENST00000606699 RPL18AQ02543 176 aaKnown RBP11.38□□□□□ -0.59
NECAB3-220ENST00000606699 GAGE2BQ13066 116 aa11.38□□□□□ -0.59
NECAB3-220ENST00000606699 RNF151Q2KHN1 245 aa11.38□□□□□ -0.59
NECAB3-220ENST00000606699 PTTG1IPP53801 180 aa11.37□□□□□ -0.59
NECAB3-220ENST00000606699 CKS1BP61024 79 aa11.37□□□□□ -0.59
NECAB3-220ENST00000606699 COX7B2Q8TF08 81 aa11.36□□□□□ -0.59
NECAB3-220ENST00000606699 TRBV30A0A0K0K1B3 111 aa11.35□□□□□ -0.59
NECAB3-220ENST00000606699 C9orf116Q5BN46 136 aaPredicted RBP11.35□□□□□ -0.59
NECAB3-220ENST00000606699 TMEM170BQ5T4T1 132 aa11.35□□□□□ -0.59
NECAB3-220ENST00000606699 HSPB8Q9UJY1 196 aa11.35□□□□□ -0.59
NECAB3-220ENST00000606699 F8VRH5 84 aa11.34□□□□□ -0.59
NECAB3-220ENST00000606699 PSORS1C2Q9UIG4 136 aa11.33□□□□□ -0.6
NECAB3-220ENST00000606699 LPAP08519 4548 aa11.33□□□□□ -0.6
NECAB3-220ENST00000606699 IGLV5-39A0A0G2JS06 123 aa11.32□□□□□ -0.6
NECAB3-220ENST00000606699 TLX1NBP0CAT3 122 aa11.32□□□□□ -0.6
NECAB3-220ENST00000606699 CXCL5P42830 114 aa11.32□□□□□ -0.6
NECAB3-220ENST00000606699 A0A1W2PNN7 141 aa11.31□□□□□ -0.6
NECAB3-220ENST00000606699 GAGE2EQ4V326 116 aa11.3□□□□□ -0.6
NECAB3-220ENST00000606699 GAGE2DQ9UEU5 116 aa11.3□□□□□ -0.6
NECAB3-220ENST00000606699 COA6Q5JTJ3 125 aaKnown RBP11.29□□□□□ -0.6
NECAB3-220ENST00000606699 PMCHL2Q9BQD1 86 aa11.29□□□□□ -0.6
NECAB3-220ENST00000606699 MAP1LC3CQ9BXW4 147 aa11.29□□□□□ -0.6
NECAB3-220ENST00000606699 TMEM223A0PJW6 202 aa11.28□□□□□ -0.6
NECAB3-220ENST00000606699 NDUFC2-KCTD14E9PQ53 114 aa11.28□□□□□ -0.6
NECAB3-220ENST00000606699 C1orf137Q5JT78 98 aa11.26□□□□□ -0.61
NECAB3-220ENST00000606699 DIRC1Q969H9 104 aa11.26□□□□□ -0.61
NECAB3-220ENST00000606699 FAM168BA1KXE4 195 aa11.25□□□□□ -0.61
NECAB3-220ENST00000606699 DPM2O94777 84 aa11.24□□□□□ -0.61
NECAB3-220ENST00000606699 PLNP26678 52 aa11.24□□□□□ -0.61
NECAB3-220ENST00000606699 SYS1-DBNDD2H3BUS1 97 aa11.23□□□□□ -0.61
NECAB3-220ENST00000606699 C9orf129Q5T035 196 aaKnown RBP11.23□□□□□ -0.61
NECAB3-220ENST00000606699 PRR26Q8N8Z3 221 aa11.23□□□□□ -0.61
NECAB3-220ENST00000606699 MUC2Q02817 5179 aa11.23□□□□□ -0.61
NECAB3-220ENST00000606699 IGKCP01834 107 aa11.22□□□□□ -0.61
NECAB3-220ENST00000606699 IGLV7-43P04211 117 aa11.22□□□□□ -0.61
NECAB3-220ENST00000606699 ZNF625Q96I27 306 aaPredicted RBP11.22□□□□□ -0.61
NECAB3-220ENST00000606699 XAGE1AQ9HD64 81 aa11.22□□□□□ -0.61
NECAB3-220ENST00000606699 PHF5AQ7RTV0 110 aaKnown RBP11.21□□□□□ -0.61
NECAB3-220ENST00000606699 FAM19A5Q7Z5A7 132 aaPredicted RBP11.21□□□□□ -0.61
NECAB3-220ENST00000606699 IGLV1-50A0A075B6I6 118 aa11.19□□□□□ -0.62
NECAB3-220ENST00000606699 H0Y9J4 135 aa11.19□□□□□ -0.62
NECAB3-220ENST00000606699 C3orf79P0CE67 100 aa11.19□□□□□ -0.62
NECAB3-220ENST00000606699 PFN2P35080 140 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms