RNA–Protein interactions for RNA: ENST00000604423.1

SRGAP2-211, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

TSL 1 (best)

Gene SRGAP2, Length 2,043 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-211ENST00000604423 WFDC11Q8NEX6 87 aa4.51□□□□□ -1.69
SRGAP2-211ENST00000604423 MAP6D1Q9H9H5 199 aa4.51□□□□□ -1.69
SRGAP2-211ENST00000604423 SNURFQ9Y675 71 aa4.51□□□□□ -1.69
SRGAP2-211ENST00000604423 DMXL1Q9Y485 3027 aa4.51□□□□□ -1.69
SRGAP2-211ENST00000604423 IGHV4-61A0A0C4DH41 118 aa4.51□□□□□ -1.69
SRGAP2-211ENST00000604423 RPL35AP18077 110 aaKnown RBP4.51□□□□□ -1.69
SRGAP2-211ENST00000604423 HAMPP81172 84 aa4.51□□□□□ -1.69
SRGAP2-211ENST00000604423 EP300Q09472 2414 aaPredicted RBP4.51□□□□□ -1.69
SRGAP2-211ENST00000604423 ABCA2Q9BZC7 2435 aa4.51□□□□□ -1.69
SRGAP2-211ENST00000604423 HRNRQ86YZ3 2850 aaPredicted RBP4.5□□□□□ -1.69
SRGAP2-211ENST00000604423 SORL1Q92673 2214 aa4.5□□□□□ -1.69
SRGAP2-211ENST00000604423 RELNP78509 3460 aa4.5□□□□□ -1.69
SRGAP2-211ENST00000604423 KHDC1LQ5JSQ8 128 aa4.5□□□□□ -1.69
SRGAP2-211ENST00000604423 BRK1Q8WUW1 75 aa4.5□□□□□ -1.69
SRGAP2-211ENST00000604423 RMI2Q96E14 147 aa4.5□□□□□ -1.69
SRGAP2-211ENST00000604423 LAMTOR3Q9UHA4 124 aa4.5□□□□□ -1.69
SRGAP2-211ENST00000604423 ATMQ13315 3056 aa4.5□□□□□ -1.69
SRGAP2-211ENST00000604423 A0A087WZ39 114 aa4.5□□□□□ -1.69
SRGAP2-211ENST00000604423 MSMBP08118 114 aa4.5□□□□□ -1.69
SRGAP2-211ENST00000604423 STHQ8IWL8 128 aa4.5□□□□□ -1.69
SRGAP2-211ENST00000604423 C11orf44Q8N8P7 122 aa4.5□□□□□ -1.69
SRGAP2-211ENST00000604423 UBE2E2Q96LR5 201 aa4.5□□□□□ -1.69
SRGAP2-211ENST00000604423 IGHV4-59P01825 116 aa4.49□□□□□ -1.69
SRGAP2-211ENST00000604423 LINC01547P58512 204 aaPredicted RBP4.49□□□□□ -1.69
SRGAP2-211ENST00000604423 Q6ZTI0 123 aa4.49□□□□□ -1.69
SRGAP2-211ENST00000604423 GVINP1Q7Z2Y8 2422 aa4.49□□□□□ -1.69
SRGAP2-211ENST00000604423 TRGV2A0A075B6R0 118 aa4.48□□□□□ -1.69
SRGAP2-211ENST00000604423 IGHV3OR16-9A0A0B4J2B5 98 aa4.48□□□□□ -1.69
SRGAP2-211ENST00000604423 TRBV7-6A0A0J9YX20 115 aa4.48□□□□□ -1.69
SRGAP2-211ENST00000604423 CXCL6P80162 114 aa4.48□□□□□ -1.69
SRGAP2-211ENST00000604423 DEFB136Q30KP8 78 aa4.48□□□□□ -1.69
SRGAP2-211ENST00000604423 Q6ZQT0 140 aa4.48□□□□□ -1.69
SRGAP2-211ENST00000604423 LOC110117498A0A087WWA1 95 aa4.48□□□□□ -1.69
SRGAP2-211ENST00000604423 Q6ZVQ6 151 aa4.48□□□□□ -1.69
SRGAP2-211ENST00000604423 FP248Q71RG6 208 aaPredicted RBP4.48□□□□□ -1.69
SRGAP2-211ENST00000604423 V9GYY9 64 aa4.48□□□□□ -1.69
SRGAP2-211ENST00000604423 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.47□□□□□ -1.69
SRGAP2-211ENST00000604423 IGLV4-60A0A075B6I1 120 aa4.47□□□□□ -1.69
SRGAP2-211ENST00000604423 TRGV4A0A0C4DH28 118 aa4.47□□□□□ -1.69
SRGAP2-211ENST00000604423 MIFP14174 115 aa4.47□□□□□ -1.69
SRGAP2-211ENST00000604423 PDE6GP18545 87 aa4.47□□□□□ -1.69
SRGAP2-211ENST00000604423 C6orf99Q4VX62 202 aa4.47□□□□□ -1.69
SRGAP2-211ENST00000604423 C1orf195Q5TG92 126 aa4.47□□□□□ -1.69
SRGAP2-211ENST00000604423 CCL19Q99731 98 aa4.47□□□□□ -1.69
SRGAP2-211ENST00000604423 C16orf95Q9H693 158 aa4.47□□□□□ -1.69
SRGAP2-211ENST00000604423 NOP10Q9NPE3 64 aaKnown RBP4.47□□□□□ -1.69
SRGAP2-211ENST00000604423 AKAP6Q13023 2319 aa4.46□□□□□ -1.69
SRGAP2-211ENST00000604423 TRBV6-8A0A0A6YYG3 113 aa4.46□□□□□ -1.69
SRGAP2-211ENST00000604423 TRAV10A0A0B4J240 114 aa4.46□□□□□ -1.69
SRGAP2-211ENST00000604423 DEFB112Q30KQ8 113 aa4.46□□□□□ -1.69
SRGAP2-211ENST00000604423 Q8IZM0 81 aa4.46□□□□□ -1.69
SRGAP2-211ENST00000604423 SPTAN1Q13813 2472 aaKnown RBP4.46□□□□□ -1.69
SRGAP2-211ENST00000604423 AKAP13Q12802 2813 aa4.46□□□□□ -1.7
SRGAP2-211ENST00000604423 LOC100131303A0A0U1RQF7 123 aa4.46□□□□□ -1.7
SRGAP2-211ENST00000604423 A0A0U1RQV1 116 aa4.46□□□□□ -1.7
SRGAP2-211ENST00000604423 H3BQ85 93 aa4.46□□□□□ -1.7
SRGAP2-211ENST00000604423 C1orf158Q8N1D5 194 aa4.46□□□□□ -1.7
SRGAP2-211ENST00000604423 LINC00959A0A1B0GUT2 108 aa4.45□□□□□ -1.7
SRGAP2-211ENST00000604423 B4DSR2 109 aa4.45□□□□□ -1.7
SRGAP2-211ENST00000604423 NANOS2P60321 138 aaKnown RBP4.45□□□□□ -1.7
SRGAP2-211ENST00000604423 PRR3P79522 188 aaKnown RBP4.45□□□□□ -1.7
SRGAP2-211ENST00000604423 COX17Q14061 63 aa4.45□□□□□ -1.7
SRGAP2-211ENST00000604423 NREPQ16612 68 aa4.45□□□□□ -1.7
SRGAP2-211ENST00000604423 C6orf223Q8N319 242 aa4.45□□□□□ -1.7
SRGAP2-211ENST00000604423 C16orf74Q96GX8 76 aa4.45□□□□□ -1.7
SRGAP2-211ENST00000604423 LINC00474Q9P2X8 69 aa4.45□□□□□ -1.7
SRGAP2-211ENST00000604423 TLN1Q9Y490 2541 aaKnown RBP4.45□□□□□ -1.7
SRGAP2-211ENST00000604423 IGHV4-30-2A0A087WSY4 118 aa4.45□□□□□ -1.7
SRGAP2-211ENST00000604423 A0A096LNT2 108 aa4.45□□□□□ -1.7
SRGAP2-211ENST00000604423 KRTAP15-1Q3LI76 137 aa4.45□□□□□ -1.7
SRGAP2-211ENST00000604423 LINC00575Q6W349 94 aa4.45□□□□□ -1.7
SRGAP2-211ENST00000604423 MPLKIPQ8TAP9 179 aa4.45□□□□□ -1.7
SRGAP2-211ENST00000604423 ZFHX2Q9C0A1 2572 aaPredicted RBP4.44□□□□□ -1.7
SRGAP2-211ENST00000604423 TRBV7-4A0A0J9YYF1 115 aa4.44□□□□□ -1.7
SRGAP2-211ENST00000604423 C18orf65Q6ZTR6 163 aa4.44□□□□□ -1.7
SRGAP2-211ENST00000604423 ZNF843Q8N446 348 aa4.44□□□□□ -1.7
SRGAP2-211ENST00000604423 TMEM254Q8TBM7 123 aa4.44□□□□□ -1.7
SRGAP2-211ENST00000604423 TM2D3Q9BRN9 247 aa4.44□□□□□ -1.7
SRGAP2-211ENST00000604423 SPTA1P02549 2419 aa4.44□□□□□ -1.7
SRGAP2-211ENST00000604423 DEFB114Q30KQ6 69 aa4.43□□□□□ -1.7
SRGAP2-211ENST00000604423 CLPSL2Q6UWE3 100 aa4.43□□□□□ -1.7
SRGAP2-211ENST00000604423 SCXQ7RTU7 201 aa4.43□□□□□ -1.7
SRGAP2-211ENST00000604423 C4orf3Q8WVX3 66 aa4.43□□□□□ -1.7
SRGAP2-211ENST00000604423 ZNF702PQ9H963 129 aa4.43□□□□□ -1.7
SRGAP2-211ENST00000604423 BPY2O14599 106 aa4.43□□□□□ -1.7
SRGAP2-211ENST00000604423 PRYO14603 147 aa4.43□□□□□ -1.7
SRGAP2-211ENST00000604423 SEC61GP60059 68 aa4.43□□□□□ -1.7
SRGAP2-211ENST00000604423 ODF3L2Q3SX64 289 aa4.43□□□□□ -1.7
SRGAP2-211ENST00000604423 C9orf66Q5T8R8 295 aa4.43□□□□□ -1.7
SRGAP2-211ENST00000604423 PKD1L2Q7Z442 2459 aa4.42□□□□□ -1.7
SRGAP2-211ENST00000604423 M0R2N4 97 aa4.42□□□□□ -1.7
SRGAP2-211ENST00000604423 ERC2-IT1O76042 136 aa4.42□□□□□ -1.7
SRGAP2-211ENST00000604423 FUSP35637 526 aaKnown RBP eCLIP4.42□□□□□ -1.7
SRGAP2-211ENST00000604423 Q6ZQY7 126 aa4.42□□□□□ -1.7
SRGAP2-211ENST00000604423 MUC7Q8TAX7 377 aa4.42□□□□□ -1.7
SRGAP2-211ENST00000604423 ASH1LQ9NR48 2969 aaKnown RBP4.42□□□□□ -1.7
SRGAP2-211ENST00000604423 GNLYP22749 145 aa4.41□□□□□ -1.7
SRGAP2-211ENST00000604423 ESRGQ1W209 222 aa4.41□□□□□ -1.7
SRGAP2-211ENST00000604423 NBASA2RRP1 2371 aa4.41□□□□□ -1.7
SRGAP2-211ENST00000604423 C19orf84I3L1E1 186 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 132 ms