RNA–Protein interactions for RNA: ENST00000603043.1

CDCA3-211, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 1,995 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-211ENST00000603043 MAPKAPK5-AS1Q8N8E1 139 aa10.34□□□□□ -0.75
CDCA3-211ENST00000603043 PGPEP1Q9NXJ5 209 aa10.34□□□□□ -0.75
CDCA3-211ENST00000603043 PKD1P98161 4303 aa10.33□□□□□ -0.76
CDCA3-211ENST00000603043 LRCOL1A6NCL2 159 aa10.33□□□□□ -0.76
CDCA3-211ENST00000603043 SPANXA1Q9NS26 97 aa10.33□□□□□ -0.76
CDCA3-211ENST00000603043 HECTD4Q9Y4D8 3996 aa10.33□□□□□ -0.76
CDCA3-211ENST00000603043 C2orf66Q6UXQ4 117 aa10.32□□□□□ -0.76
CDCA3-211ENST00000603043 RNASE13Q5GAN3 156 aaKnown RBP10.31□□□□□ -0.76
CDCA3-211ENST00000603043 LYRM7Q5U5X0 104 aa10.31□□□□□ -0.76
CDCA3-211ENST00000603043 KRTAP26-1Q6PEX3 210 aa10.3□□□□□ -0.76
CDCA3-211ENST00000603043 BAALCQ8WXS3 180 aa10.3□□□□□ -0.76
CDCA3-211ENST00000603043 ANAPC13Q9BS18 74 aa10.3□□□□□ -0.76
CDCA3-211ENST00000603043 LECT2O14960 151 aa10.3□□□□□ -0.76
CDCA3-211ENST00000603043 MT-ATP8P03928 68 aa10.3□□□□□ -0.76
CDCA3-211ENST00000603043 PPDPFLQ8WWR9 84 aa10.3□□□□□ -0.76
CDCA3-211ENST00000603043 HIST1H4GQ99525 98 aa10.3□□□□□ -0.76
CDCA3-211ENST00000603043 PYGO1Q9Y3Y4 419 aa10.3□□□□□ -0.76
CDCA3-211ENST00000603043 LINC00959A0A1B0GUT2 108 aa10.29□□□□□ -0.76
CDCA3-211ENST00000603043 PRSS1P07477 247 aa10.29□□□□□ -0.76
CDCA3-211ENST00000603043 ZC2HC1BQ5TFG8 222 aa10.29□□□□□ -0.76
CDCA3-211ENST00000603043 OPRPNQ99935 248 aaPredicted RBP10.29□□□□□ -0.76
CDCA3-211ENST00000603043 MRPS36P82909 103 aaKnown RBP10.28□□□□□ -0.76
CDCA3-211ENST00000603043 Q8N814 137 aa10.28□□□□□ -0.76
CDCA3-211ENST00000603043 CHCHD10Q8WYQ3 142 aaPredicted RBP10.28□□□□□ -0.76
CDCA3-211ENST00000603043 FAM104AQ969W3 186 aa10.28□□□□□ -0.76
CDCA3-211ENST00000603043 PKHD1P08F94 4074 aa10.28□□□□□ -0.76
CDCA3-211ENST00000603043 KRTAP10-2P60368 255 aa10.28□□□□□ -0.76
CDCA3-211ENST00000603043 SS18L2Q9UHA2 77 aa10.28□□□□□ -0.76
CDCA3-211ENST00000603043 XGP55808 180 aa10.27□□□□□ -0.77
CDCA3-211ENST00000603043 SS18Q15532 418 aa10.27□□□□□ -0.77
CDCA3-211ENST00000603043 TTTY13Q9BZ97 58 aa10.27□□□□□ -0.77
CDCA3-211ENST00000603043 DNAH11Q96DT5 4516 aa10.27□□□□□ -0.77
CDCA3-211ENST00000603043 TOMM6Q96B49 74 aa10.26□□□□□ -0.77
CDCA3-211ENST00000603043 IGLV4-3A0A075B6K6 122 aa10.26□□□□□ -0.77
CDCA3-211ENST00000603043 TRAV13-1A0A0B4J241 112 aa10.26□□□□□ -0.77
CDCA3-211ENST00000603043 PLNP26678 52 aa10.26□□□□□ -0.77
CDCA3-211ENST00000603043 XCL1P47992 114 aa10.26□□□□□ -0.77
CDCA3-211ENST00000603043 TMEM141Q96I45 108 aa10.26□□□□□ -0.77
CDCA3-211ENST00000603043 IGIPA6NJ69 53 aa10.25□□□□□ -0.77
CDCA3-211ENST00000603043 TEN1Q86WV5 123 aa10.25□□□□□ -0.77
CDCA3-211ENST00000603043 USP17L23D6RBM5 183 aa10.25□□□□□ -0.77
CDCA3-211ENST00000603043 SMCPP49901 116 aaPredicted RBP10.25□□□□□ -0.77
CDCA3-211ENST00000603043 LINC01549A6NIU2 74 aa10.24□□□□□ -0.77
CDCA3-211ENST00000603043 FUSP35637 526 aaKnown RBP eCLIP10.24□□□□□ -0.77
CDCA3-211ENST00000603043 TIMM17AQ99595 171 aa10.24□□□□□ -0.77
CDCA3-211ENST00000603043 C16orf90A8MZG2 172 aa10.23□□□□□ -0.77
CDCA3-211ENST00000603043 C14orf177Q52M58 125 aa10.23□□□□□ -0.77
CDCA3-211ENST00000603043 SCGB3A1Q96QR1 104 aa10.23□□□□□ -0.77
CDCA3-211ENST00000603043 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.23□□□□□ -0.77
CDCA3-211ENST00000603043 CD164L2Q6UWJ8 174 aa10.23□□□□□ -0.77
CDCA3-211ENST00000603043 NTN5Q8WTR8 489 aaPredicted RBP10.23□□□□□ -0.77
CDCA3-211ENST00000603043 TRBV20-1A0A075B6N2 111 aa10.22□□□□□ -0.77
CDCA3-211ENST00000603043 MYMXA0A1B0GTQ4 84 aa10.22□□□□□ -0.77
CDCA3-211ENST00000603043 PAPPA-AS1Q5QFB9 102 aa10.22□□□□□ -0.77
CDCA3-211ENST00000603043 MRPL35Q9NZE8 188 aaKnown RBP10.21□□□□□ -0.77
CDCA3-211ENST00000603043 IGLV5-52A0A0A0MRZ9 124 aa10.21□□□□□ -0.78
CDCA3-211ENST00000603043 TRAV12-1A0A0B4J245 112 aa10.21□□□□□ -0.78
CDCA3-211ENST00000603043 M0QXV9 152 aa10.21□□□□□ -0.78
CDCA3-211ENST00000603043 CARD19Q96LW7 228 aa10.21□□□□□ -0.78
CDCA3-211ENST00000603043 AMELXQ99217 191 aa10.21□□□□□ -0.78
CDCA3-211ENST00000603043 PSMB2P49721 201 aa10.2□□□□□ -0.78
CDCA3-211ENST00000603043 B5MCH6 92 aa10.19□□□□□ -0.78
CDCA3-211ENST00000603043 Q6Q795 121 aa10.19□□□□□ -0.78
CDCA3-211ENST00000603043 UBE2D1P51668 147 aa10.19□□□□□ -0.78
CDCA3-211ENST00000603043 C15orf56Q8N910 161 aa10.19□□□□□ -0.78
CDCA3-211ENST00000603043 F8VRH5 84 aa10.17□□□□□ -0.78
CDCA3-211ENST00000603043 COX7A2LO14548 114 aa10.17□□□□□ -0.78
CDCA3-211ENST00000603043 LINC00242Q5T6M2 205 aa10.17□□□□□ -0.78
CDCA3-211ENST00000603043 DNAH5Q8TE73 4624 aa10.16□□□□□ -0.78
CDCA3-211ENST00000603043 MALP21145 153 aa10.16□□□□□ -0.78
CDCA3-211ENST00000603043 C5orf38Q86SI9 138 aa10.16□□□□□ -0.78
CDCA3-211ENST00000603043 BIRC6Q9NR09 4857 aa10.16□□□□□ -0.78
CDCA3-211ENST00000603043 IGHV3OR16-9A0A0B4J2B5 98 aa10.15□□□□□ -0.78
CDCA3-211ENST00000603043 IGHV1-58A0A0C4DH39 117 aa10.15□□□□□ -0.78
CDCA3-211ENST00000603043 LOC107984156A0A0G2JMH3 177 aa10.15□□□□□ -0.78
CDCA3-211ENST00000603043 NDUFV3P56181 108 aaKnown RBP10.15□□□□□ -0.78
CDCA3-211ENST00000603043 HERV-K104P63124 156 aa10.15□□□□□ -0.78
CDCA3-211ENST00000603043 GAGE2BQ13066 116 aa10.15□□□□□ -0.78
CDCA3-211ENST00000603043 GAGE2EQ4V326 116 aa10.15□□□□□ -0.78
CDCA3-211ENST00000603043 HIGD2BQ4VC39 106 aa10.15□□□□□ -0.78
CDCA3-211ENST00000603043 ARL17AQ8IVW1 177 aa10.15□□□□□ -0.78
CDCA3-211ENST00000603043 GAGE2DQ9UEU5 116 aa10.15□□□□□ -0.78
CDCA3-211ENST00000603043 DYNC1H1Q14204 4646 aaKnown RBP10.15□□□□□ -0.78
CDCA3-211ENST00000603043 SNCGO76070 127 aa10.15□□□□□ -0.78
CDCA3-211ENST00000603043 GVQW2A0A096LPI5 108 aaPredicted RBP10.14□□□□□ -0.79
CDCA3-211ENST00000603043 IFITM1P13164 125 aa10.14□□□□□ -0.79
CDCA3-211ENST00000603043 COX6A2Q02221 97 aa10.14□□□□□ -0.79
CDCA3-211ENST00000603043 PMVKQ15126 192 aa10.13□□□□□ -0.79
CDCA3-211ENST00000603043 FAM19A3Q7Z5A8 133 aa10.13□□□□□ -0.79
CDCA3-211ENST00000603043 ANKRD29Q8N6D5 301 aa10.13□□□□□ -0.79
CDCA3-211ENST00000603043 SCGB1C2P0DMR2 95 aa10.12□□□□□ -0.79
CDCA3-211ENST00000603043 KRTAP10-1P60331 282 aa10.12□□□□□ -0.79
CDCA3-211ENST00000603043 TCL1BO95988 128 aa10.12□□□□□ -0.79
CDCA3-211ENST00000603043 CNBPP62633 177 aaKnown RBP10.12□□□□□ -0.79
CDCA3-211ENST00000603043 LRP1BQ9NZR2 4599 aa10.11□□□□□ -0.79
CDCA3-211ENST00000603043 A0A087WZ39 114 aa10.11□□□□□ -0.79
CDCA3-211ENST00000603043 HERVK_113P63121 156 aa10.11□□□□□ -0.79
CDCA3-211ENST00000603043 SRSF9Q13242 221 aaKnown RBP eCLIP10.11□□□□□ -0.79
CDCA3-211ENST00000603043 LINC01620Q4KN68 170 aa10.11□□□□□ -0.79
CDCA3-211ENST00000603043 A0A0J9YXV3 536 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms