RNA–Protein interactions for RNA: ENST00000600453.1

IRF3-226, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-226ENST00000600453 FAM19A3Q7Z5A8 133 aa9.73□□□□□ -0.85
IRF3-226ENST00000600453 PACRGQ96M98 296 aaPredicted RBP9.73□□□□□ -0.85
IRF3-226ENST00000600453 TIMM17AQ99595 171 aa9.73□□□□□ -0.85
IRF3-226ENST00000600453 PRSS2P07478 247 aa9.72□□□□□ -0.85
IRF3-226ENST00000600453 HERVK_113P63121 156 aa9.72□□□□□ -0.85
IRF3-226ENST00000600453 KIAA1644Q3SXP7 199 aa9.72□□□□□ -0.85
IRF3-226ENST00000600453 TOMM6Q96B49 74 aa9.72□□□□□ -0.85
IRF3-226ENST00000600453 PKHD1L1Q86WI1 4243 aa9.72□□□□□ -0.85
IRF3-226ENST00000600453 C6orf226Q5I0X4 101 aa9.71□□□□□ -0.86
IRF3-226ENST00000600453 C10orf25Q5T742 122 aa9.71□□□□□ -0.86
IRF3-226ENST00000600453 LINC00173Q6ZV60 143 aa9.71□□□□□ -0.86
IRF3-226ENST00000600453 ERASQ7Z444 233 aa9.71□□□□□ -0.86
IRF3-226ENST00000600453 LINC01600Q96MT4 127 aa9.71□□□□□ -0.86
IRF3-226ENST00000600453 C6orf48Q9UBA6 75 aa9.71□□□□□ -0.86
IRF3-226ENST00000600453 FAT3Q8TDW7 4589 aa9.7□□□□□ -0.86
IRF3-226ENST00000600453 C5orf52A6NGY3 159 aa9.7□□□□□ -0.86
IRF3-226ENST00000600453 MT1HL1P0DM35 61 aa9.7□□□□□ -0.86
IRF3-226ENST00000600453 CKS1BP61024 79 aa9.7□□□□□ -0.86
IRF3-226ENST00000600453 SRSF9Q13242 221 aaKnown RBP eCLIP9.7□□□□□ -0.86
IRF3-226ENST00000600453 SCGB3A1Q96QR1 104 aa9.7□□□□□ -0.86
IRF3-226ENST00000600453 GEMIN7Q9H840 131 aaKnown RBP9.7□□□□□ -0.86
IRF3-226ENST00000600453 PLA2G2DQ9UNK4 145 aa9.7□□□□□ -0.86
IRF3-226ENST00000600453 GAGE2EQ4V326 116 aa9.69□□□□□ -0.86
IRF3-226ENST00000600453 GAGE2DQ9UEU5 116 aa9.69□□□□□ -0.86
IRF3-226ENST00000600453 NDUFC2-KCTD14E9PQ53 114 aa9.68□□□□□ -0.86
IRF3-226ENST00000600453 ZC2HC1BQ5TFG8 222 aa9.68□□□□□ -0.86
IRF3-226ENST00000600453 Q8IZM0 81 aa9.68□□□□□ -0.86
IRF3-226ENST00000600453 ALKBH7Q9BT30 221 aaPredicted RBP9.68□□□□□ -0.86
IRF3-226ENST00000600453 LINC01546A6NGU7 62 aa9.67□□□□□ -0.86
IRF3-226ENST00000600453 NDUFA6P56556 154 aa9.67□□□□□ -0.86
IRF3-226ENST00000600453 C2orf82Q6UX34 121 aa9.67□□□□□ -0.86
IRF3-226ENST00000600453 PHF5AQ7RTV0 110 aaKnown RBP9.67□□□□□ -0.86
IRF3-226ENST00000600453 TOMM7Q9P0U1 55 aa9.67□□□□□ -0.86
IRF3-226ENST00000600453 PSORS1C2Q9UIG4 136 aa9.67□□□□□ -0.86
IRF3-226ENST00000600453 SNRPEP62304 92 aaKnown RBP9.66□□□□□ -0.86
IRF3-226ENST00000600453 FA2HQ7L5A8 372 aa9.66□□□□□ -0.86
IRF3-226ENST00000600453 C1orf137Q5JT78 98 aa9.65□□□□□ -0.86
IRF3-226ENST00000600453 CDKN2A-AS1Q9UH64 79 aa9.65□□□□□ -0.86
IRF3-226ENST00000600453 LOC105371267A0A1B0GV96 52 aa9.64□□□□□ -0.87
IRF3-226ENST00000600453 CXCL5P42830 114 aa9.64□□□□□ -0.87
IRF3-226ENST00000600453 BAGE3Q86Y29 109 aa9.64□□□□□ -0.87
IRF3-226ENST00000600453 TINCRA0A1B0GVN0 87 aa9.63□□□□□ -0.87
IRF3-226ENST00000600453 S100A2P29034 98 aa9.63□□□□□ -0.87
IRF3-226ENST00000600453 FAM19A5Q7Z5A7 132 aaPredicted RBP9.63□□□□□ -0.87
IRF3-226ENST00000600453 FAM168BA1KXE4 195 aa9.62□□□□□ -0.87
IRF3-226ENST00000600453 F8VRH5 84 aa9.62□□□□□ -0.87
IRF3-226ENST00000600453 PDZD11Q5EBL8 140 aa9.62□□□□□ -0.87
IRF3-226ENST00000600453 LINC00469Q8N7U9 141 aa9.62□□□□□ -0.87
IRF3-226ENST00000600453 C18orf32Q8TCD1 76 aa9.62□□□□□ -0.87
IRF3-226ENST00000600453 CHCHD1Q96BP2 118 aaKnown RBP9.62□□□□□ -0.87
IRF3-226ENST00000600453 PMVKQ15126 192 aa9.61□□□□□ -0.87
IRF3-226ENST00000600453 CST9LQ9H4G1 147 aa9.61□□□□□ -0.87
IRF3-226ENST00000600453 M0QXV9 152 aa9.6□□□□□ -0.87
IRF3-226ENST00000600453 IGLV7-43P04211 117 aa9.6□□□□□ -0.87
IRF3-226ENST00000600453 KRTAP10-8P60410 259 aa9.6□□□□□ -0.87
IRF3-226ENST00000600453 UBE2BP63146 152 aa9.6□□□□□ -0.87
IRF3-226ENST00000600453 HIST3H2BBQ8N257 126 aa9.6□□□□□ -0.87
IRF3-226ENST00000600453 DIRC1Q969H9 104 aa9.6□□□□□ -0.87
IRF3-226ENST00000600453 IGLV5-45A0A087WSX0 123 aa9.59□□□□□ -0.87
IRF3-226ENST00000600453 ODF1Q14990 250 aa9.59□□□□□ -0.87
IRF3-226ENST00000600453 C9orf129Q5T035 196 aaKnown RBP9.59□□□□□ -0.87
IRF3-226ENST00000600453 H3BRM9 83 aa9.58□□□□□ -0.88
IRF3-226ENST00000600453 LINC00614P0C842 121 aa9.58□□□□□ -0.88
IRF3-226ENST00000600453 LBHQ53QV2 105 aaPredicted RBP9.58□□□□□ -0.88
IRF3-226ENST00000600453 COX7B2Q8TF08 81 aa9.58□□□□□ -0.88
IRF3-226ENST00000600453 SMIM1B2RUZ4 78 aa9.57□□□□□ -0.88
IRF3-226ENST00000600453 HSBP1O75506 76 aa9.56□□□□□ -0.88
IRF3-226ENST00000600453 SERF1AO75920 110 aa9.56□□□□□ -0.88
IRF3-226ENST00000600453 KRTAP7-1Q8IUC3 87 aa9.55□□□□□ -0.88
IRF3-226ENST00000600453 HIST1H2BLQ99880 126 aa9.55□□□□□ -0.88
IRF3-226ENST00000600453 XAGE1AQ9HD64 81 aa9.54□□□□□ -0.88
IRF3-226ENST00000600453 C22orf24Q9Y442 160 aa9.54□□□□□ -0.88
IRF3-226ENST00000600453 H0Y9J4 135 aa9.53□□□□□ -0.88
IRF3-226ENST00000600453 NUPR1O60356 82 aa9.53□□□□□ -0.88
IRF3-226ENST00000600453 ATP5LO75964 103 aa9.53□□□□□ -0.88
IRF3-226ENST00000600453 HBDP02042 147 aa9.53□□□□□ -0.88
IRF3-226ENST00000600453 SPINK8P0C7L1 97 aa9.53□□□□□ -0.88
IRF3-226ENST00000600453 TP73-AS1Q9UF72 201 aa9.53□□□□□ -0.88
IRF3-226ENST00000600453 IGLC3P0DOY3 106 aa9.52□□□□□ -0.89
IRF3-226ENST00000600453 FABP4P15090 132 aa9.52□□□□□ -0.89
IRF3-226ENST00000600453 AKR1D1P51857 326 aa9.52□□□□□ -0.89
IRF3-226ENST00000600453 KRTAP11-1Q8IUC1 163 aa9.52□□□□□ -0.89
IRF3-226ENST00000600453 LINC00310P59036 64 aa9.51□□□□□ -0.89
IRF3-226ENST00000600453 SMIM6P0DI80 62 aa9.5□□□□□ -0.89
IRF3-226ENST00000600453 MRPL55Q7Z7F7 128 aaKnown RBP9.5□□□□□ -0.89
IRF3-226ENST00000600453 HMCN2Q8NDA2 5059 aa9.5□□□□□ -0.89
IRF3-226ENST00000600453 A0A096LNJ9 63 aa9.49□□□□□ -0.89
IRF3-226ENST00000600453 URB1-AS1Q96HZ7 61 aa9.49□□□□□ -0.89
IRF3-226ENST00000600453 HSPB8Q9UJY1 196 aa9.49□□□□□ -0.89
IRF3-226ENST00000600453 TNXBP22105 4242 aa9.48□□□□□ -0.89
IRF3-226ENST00000600453 IGLV1-50A0A075B6I6 118 aa9.48□□□□□ -0.89
IRF3-226ENST00000600453 ZNF861PO60384 105 aa9.48□□□□□ -0.89
IRF3-226ENST00000600453 SFTA2Q6UW10 78 aa9.48□□□□□ -0.89
IRF3-226ENST00000600453 IGLV5-39A0A0G2JS06 123 aa9.47□□□□□ -0.89
IRF3-226ENST00000600453 LEPROTL1O95214 131 aa9.47□□□□□ -0.89
IRF3-226ENST00000600453 ZNF22P17026 224 aaPredicted RBP9.46□□□□□ -0.9
IRF3-226ENST00000600453 COX17Q14061 63 aa9.46□□□□□ -0.9
IRF3-226ENST00000600453 JOSD1Q15040 202 aaPredicted RBP9.46□□□□□ -0.9
IRF3-226ENST00000600453 PMCHL1Q16048 86 aa9.46□□□□□ -0.9
IRF3-226ENST00000600453 RPL13AP40429 203 aaKnown RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms