RNA–Protein interactions for RNA: ENST00000600118.5

CHMP2A-206, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-206ENST00000600118 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.17□□□□□ -1.1
CHMP2A-206ENST00000600118 NDUFA1O15239 70 aa8.17□□□□□ -1.1
CHMP2A-206ENST00000600118 CXCL5P42830 114 aa8.17□□□□□ -1.1
CHMP2A-206ENST00000600118 HERVK_113P61574 105 aa8.17□□□□□ -1.1
CHMP2A-206ENST00000600118 C2orf82Q6UX34 121 aa8.17□□□□□ -1.1
CHMP2A-206ENST00000600118 UNQ6190/PRO20217Q6UXQ8 127 aa8.17□□□□□ -1.1
CHMP2A-206ENST00000600118 E9PLD3 99 aa8.16□□□□□ -1.1
CHMP2A-206ENST00000600118 PKHD1P08F94 4074 aa8.16□□□□□ -1.1
CHMP2A-206ENST00000600118 RNF151Q2KHN1 245 aa8.16□□□□□ -1.1
CHMP2A-206ENST00000600118 STPG4Q8N801 248 aa8.16□□□□□ -1.1
CHMP2A-206ENST00000600118 C6orf48Q9UBA6 75 aa8.16□□□□□ -1.1
CHMP2A-206ENST00000600118 LRP1BQ9NZR2 4599 aa8.15□□□□□ -1.1
CHMP2A-206ENST00000600118 TRBV30A0A0K0K1B3 111 aa8.15□□□□□ -1.1
CHMP2A-206ENST00000600118 LEPROTO15243 131 aa8.15□□□□□ -1.1
CHMP2A-206ENST00000600118 GCSHP23434 173 aa8.15□□□□□ -1.1
CHMP2A-206ENST00000600118 TSPEAR-AS2P59090 65 aa8.15□□□□□ -1.1
CHMP2A-206ENST00000600118 CKS1BP61024 79 aa8.15□□□□□ -1.1
CHMP2A-206ENST00000600118 LINC01620Q4KN68 170 aa8.15□□□□□ -1.1
CHMP2A-206ENST00000600118 ATOH7Q8N100 152 aa8.15□□□□□ -1.1
CHMP2A-206ENST00000600118 ZNF625Q96I27 306 aaPredicted RBP8.15□□□□□ -1.1
CHMP2A-206ENST00000600118 C16orf90A8MZG2 172 aa8.14□□□□□ -1.11
CHMP2A-206ENST00000600118 SCGB1D1O95968 90 aa8.14□□□□□ -1.11
CHMP2A-206ENST00000600118 KRTAP10-1P60331 282 aa8.14□□□□□ -1.11
CHMP2A-206ENST00000600118 JOSD1Q15040 202 aaPredicted RBP8.14□□□□□ -1.11
CHMP2A-206ENST00000600118 SDIM1Q6ZPB5 146 aa8.14□□□□□ -1.11
CHMP2A-206ENST00000600118 PLEKHB2Q96CS7 222 aa8.14□□□□□ -1.11
CHMP2A-206ENST00000600118 DNAH8Q96JB1 4490 aa8.14□□□□□ -1.11
CHMP2A-206ENST00000600118 J3QQQ9 107 aa8.13□□□□□ -1.11
CHMP2A-206ENST00000600118 ANKRD39Q53RE8 183 aa8.13□□□□□ -1.11
CHMP2A-206ENST00000600118 IGKV2D-26A0A0A0MRZ7 120 aa8.12□□□□□ -1.11
CHMP2A-206ENST00000600118 TLX1NBP0CAT3 122 aa8.12□□□□□ -1.11
CHMP2A-206ENST00000600118 SFTA2Q6UW10 78 aa8.12□□□□□ -1.11
CHMP2A-206ENST00000600118 MAJINQ3KP22 176 aa8.11□□□□□ -1.11
CHMP2A-206ENST00000600118 C9orf116Q5BN46 136 aaPredicted RBP8.11□□□□□ -1.11
CHMP2A-206ENST00000600118 NDUFA12Q9UI09 145 aa8.11□□□□□ -1.11
CHMP2A-206ENST00000600118 NMUP48645 174 aa8.1□□□□□ -1.11
CHMP2A-206ENST00000600118 PYY3Q5JQD4 70 aa8.1□□□□□ -1.11
CHMP2A-206ENST00000600118 PKIGQ9Y2B9 76 aa8.1□□□□□ -1.11
CHMP2A-206ENST00000600118 LOC107984640A0A0U1RRK4 108 aa8.09□□□□□ -1.11
CHMP2A-206ENST00000600118 LGALS3P17931 250 aaKnown RBP8.09□□□□□ -1.11
CHMP2A-206ENST00000600118 Q6ZSA8 131 aa8.09□□□□□ -1.11
CHMP2A-206ENST00000600118 A0A096LNI7 61 aa8.08□□□□□ -1.12
CHMP2A-206ENST00000600118 MYMXA0A1B0GTQ4 84 aa8.08□□□□□ -1.12
CHMP2A-206ENST00000600118 NDUFC2-KCTD14E9PQ53 114 aa8.08□□□□□ -1.12
CHMP2A-206ENST00000600118 HERV-K104P63124 156 aa8.08□□□□□ -1.12
CHMP2A-206ENST00000600118 CIRBPQ14011 172 aaKnown RBP8.08□□□□□ -1.12
CHMP2A-206ENST00000600118 Q6ZRP5 223 aa8.08□□□□□ -1.12
CHMP2A-206ENST00000600118 FAM30AQ9NZY2 134 aa8.08□□□□□ -1.12
CHMP2A-206ENST00000600118 PANO1I0J062 215 aa8.07□□□□□ -1.12
CHMP2A-206ENST00000600118 PTTG1IPP53801 180 aa8.07□□□□□ -1.12
CHMP2A-206ENST00000600118 ERG28Q9UKR5 140 aa8.07□□□□□ -1.12
CHMP2A-206ENST00000600118 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.07□□□□□ -1.12
CHMP2A-206ENST00000600118 LOC105371267A0A1B0GV96 52 aa8.06□□□□□ -1.12
CHMP2A-206ENST00000600118 HSBP1L1C9JCN9 74 aa8.06□□□□□ -1.12
CHMP2A-206ENST00000600118 CHTF8P0CG12 524 aa8.06□□□□□ -1.12
CHMP2A-206ENST00000600118 COX17Q14061 63 aa8.06□□□□□ -1.12
CHMP2A-206ENST00000600118 TTTY13Q9BZ97 58 aa8.06□□□□□ -1.12
CHMP2A-206ENST00000600118 APOBP04114 4563 aaKnown RBP8.06□□□□□ -1.12
CHMP2A-206ENST00000600118 BIRC6Q9NR09 4857 aa8.06□□□□□ -1.12
CHMP2A-206ENST00000600118 RPL18AQ02543 176 aaKnown RBP8.05□□□□□ -1.12
CHMP2A-206ENST00000600118 GAGE2BQ13066 116 aa8.05□□□□□ -1.12
CHMP2A-206ENST00000600118 PCP2Q8IVA1 136 aa8.05□□□□□ -1.12
CHMP2A-206ENST00000600118 SPACA4Q8TDM5 124 aa8.05□□□□□ -1.12
CHMP2A-206ENST00000600118 IGKV2-24A0A0C4DH68 120 aa8.04□□□□□ -1.12
CHMP2A-206ENST00000600118 A0A0J9YXY3 114 aa8.04□□□□□ -1.12
CHMP2A-206ENST00000600118 ZNF815PA8K554 130 aa8.04□□□□□ -1.12
CHMP2A-206ENST00000600118 PFN2P35080 140 aa8.04□□□□□ -1.12
CHMP2A-206ENST00000600118 LINC00474Q9P2X8 69 aa8.04□□□□□ -1.12
CHMP2A-206ENST00000600118 LINC00587B1AMM8 73 aa8.03□□□□□ -1.12
CHMP2A-206ENST00000600118 SMIM13P0DJ93 91 aa8.03□□□□□ -1.12
CHMP2A-206ENST00000600118 GAGE2EQ4V326 116 aa8.03□□□□□ -1.12
CHMP2A-206ENST00000600118 VAMP8Q9BV40 100 aa8.03□□□□□ -1.12
CHMP2A-206ENST00000600118 GAGE2DQ9UEU5 116 aa8.03□□□□□ -1.12
CHMP2A-206ENST00000600118 EPM2AB3EWF7 344 aa8.02□□□□□ -1.13
CHMP2A-206ENST00000600118 MEIG1Q5JSS6 88 aa8.02□□□□□ -1.13
CHMP2A-206ENST00000600118 C9orf129Q5T035 196 aaKnown RBP8.02□□□□□ -1.13
CHMP2A-206ENST00000600118 PAM16Q9Y3D7 125 aa8.02□□□□□ -1.13
CHMP2A-206ENST00000600118 A0A0U1RRA0 63 aa8.01□□□□□ -1.13
CHMP2A-206ENST00000600118 TIMM17BO60830 172 aa8.01□□□□□ -1.13
CHMP2A-206ENST00000600118 XGP55808 180 aa8.01□□□□□ -1.13
CHMP2A-206ENST00000600118 LINC00158P58513 81 aa8.01□□□□□ -1.13
CHMP2A-206ENST00000600118 SPATA45Q537H7 98 aa8.01□□□□□ -1.13
CHMP2A-206ENST00000600118 SCXQ7RTU7 201 aa8.01□□□□□ -1.13
CHMP2A-206ENST00000600118 LITAFQ99732 161 aa8.01□□□□□ -1.13
CHMP2A-206ENST00000600118 SND1-IT1Q9HBX3 110 aa8.01□□□□□ -1.13
CHMP2A-206ENST00000600118 XAGE1AQ9HD64 81 aa8.01□□□□□ -1.13
CHMP2A-206ENST00000600118 RYR1P21817 5038 aa8.01□□□□□ -1.13
CHMP2A-206ENST00000600118 KIAA1109Q2LD37 5005 aa8.01□□□□□ -1.13
CHMP2A-206ENST00000600118 A0A087WYN8 130 aa8□□□□□ -1.13
CHMP2A-206ENST00000600118 A0A1W2PNN7 141 aa8□□□□□ -1.13
CHMP2A-206ENST00000600118 CDK2AP2O75956 126 aa8□□□□□ -1.13
CHMP2A-206ENST00000600118 COX8AP10176 69 aa8□□□□□ -1.13
CHMP2A-206ENST00000600118 BOD1L2Q8IYS8 172 aa8□□□□□ -1.13
CHMP2A-206ENST00000600118 CIRBP-AS1Q8TBR5 109 aa8□□□□□ -1.13
CHMP2A-206ENST00000600118 PLAC8Q9NZF1 115 aa8□□□□□ -1.13
CHMP2A-206ENST00000600118 DLEU1O43261 78 aa7.99□□□□□ -1.13
CHMP2A-206ENST00000600118 ADAMTSL4-AS1Q5T5F5 129 aa7.99□□□□□ -1.13
CHMP2A-206ENST00000600118 KRTAP7-1Q8IUC3 87 aa7.99□□□□□ -1.13
CHMP2A-206ENST00000600118 MIR7-3HGQ8N6C7 128 aa7.99□□□□□ -1.13
CHMP2A-206ENST00000600118 FAM168BA1KXE4 195 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms