RNA–Protein interactions for RNA: ENST00000598860.1

SMG9-207, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-207ENST00000598860 F8VRH5 84 aa6.89□□□□□ -1.31
SMG9-207ENST00000598860 SYS1-DBNDD2H3BUS1 97 aa6.89□□□□□ -1.31
SMG9-207ENST00000598860 HERVK_113P63121 156 aa6.89□□□□□ -1.31
SMG9-207ENST00000598860 C6orf223Q8N319 242 aa6.89□□□□□ -1.31
SMG9-207ENST00000598860 KRTAP1-5Q9BYS1 174 aa6.89□□□□□ -1.31
SMG9-207ENST00000598860 CHTOPQ9Y3Y2 248 aaKnown RBP6.89□□□□□ -1.31
SMG9-207ENST00000598860 IGKV2D-24A0A075B6R9 120 aa6.88□□□□□ -1.31
SMG9-207ENST00000598860 TINCRA0A1B0GVN0 87 aa6.88□□□□□ -1.31
SMG9-207ENST00000598860 A0A1B0GVY2 172 aa6.88□□□□□ -1.31
SMG9-207ENST00000598860 C3orf79P0CE67 100 aa6.88□□□□□ -1.31
SMG9-207ENST00000598860 IGLC3P0DOY3 106 aa6.88□□□□□ -1.31
SMG9-207ENST00000598860 LINC01547P58512 204 aaPredicted RBP6.88□□□□□ -1.31
SMG9-207ENST00000598860 KRTDAPP60985 99 aa6.88□□□□□ -1.31
SMG9-207ENST00000598860 CD164L2Q6UWJ8 174 aa6.88□□□□□ -1.31
SMG9-207ENST00000598860 CHCHD10Q8WYQ3 142 aaPredicted RBP6.88□□□□□ -1.31
SMG9-207ENST00000598860 GEMIN7Q9H840 131 aaKnown RBP6.88□□□□□ -1.31
SMG9-207ENST00000598860 Q9HAA7 133 aa6.88□□□□□ -1.31
SMG9-207ENST00000598860 KRTAP29-1A8MX34 341 aaPredicted RBP6.87□□□□□ -1.31
SMG9-207ENST00000598860 H0Y8G0 127 aa6.87□□□□□ -1.31
SMG9-207ENST00000598860 PLNP26678 52 aa6.87□□□□□ -1.31
SMG9-207ENST00000598860 LINC00242Q5T6M2 205 aa6.87□□□□□ -1.31
SMG9-207ENST00000598860 ZC2HC1BQ5TFG8 222 aa6.87□□□□□ -1.31
SMG9-207ENST00000598860 LINC01545Q5VT33 79 aa6.87□□□□□ -1.31
SMG9-207ENST00000598860 LINC01561Q8N1V8 128 aa6.87□□□□□ -1.31
SMG9-207ENST00000598860 CHAC1Q9BUX1 264 aa6.87□□□□□ -1.31
SMG9-207ENST00000598860 EPPK1P58107 5090 aaKnown RBP6.86□□□□□ -1.31
SMG9-207ENST00000598860 IGLV4-69A0A075B6H9 119 aa6.86□□□□□ -1.31
SMG9-207ENST00000598860 IGLV10-54A0A075B6I4 117 aa6.86□□□□□ -1.31
SMG9-207ENST00000598860 A0A0J9YXV3 536 aa6.86□□□□□ -1.31
SMG9-207ENST00000598860 XCL1P47992 114 aa6.86□□□□□ -1.31
SMG9-207ENST00000598860 OR10D4PQ8NGN7 298 aa6.86□□□□□ -1.31
SMG9-207ENST00000598860 MRPL35Q9NZE8 188 aaKnown RBP6.86□□□□□ -1.31
SMG9-207ENST00000598860 DNAH10Q8IVF4 4471 aa6.86□□□□□ -1.31
SMG9-207ENST00000598860 IGHV3OR16-9A0A0B4J2B5 98 aa6.85□□□□□ -1.31
SMG9-207ENST00000598860 H3BRM9 83 aa6.85□□□□□ -1.31
SMG9-207ENST00000598860 PSCAO43653 123 aa6.85□□□□□ -1.31
SMG9-207ENST00000598860 DPM2O94777 84 aa6.85□□□□□ -1.31
SMG9-207ENST00000598860 SRSF9Q13242 221 aaKnown RBP eCLIP6.85□□□□□ -1.31
SMG9-207ENST00000598860 A0A087WZ39 114 aa6.84□□□□□ -1.31
SMG9-207ENST00000598860 C11orf86A6NJI1 115 aa6.84□□□□□ -1.31
SMG9-207ENST00000598860 COX7A2LO14548 114 aa6.84□□□□□ -1.31
SMG9-207ENST00000598860 APOMO95445 188 aa6.84□□□□□ -1.31
SMG9-207ENST00000598860 IGKCP01834 107 aa6.84□□□□□ -1.31
SMG9-207ENST00000598860 KRTAP26-1Q6PEX3 210 aa6.84□□□□□ -1.31
SMG9-207ENST00000598860 LINC00469Q8N7U9 141 aa6.84□□□□□ -1.31
SMG9-207ENST00000598860 FRAS1Q86XX4 4008 aa6.84□□□□□ -1.32
SMG9-207ENST00000598860 BIRC6Q9NR09 4857 aa6.83□□□□□ -1.32
SMG9-207ENST00000598860 ZNF22P17026 224 aaPredicted RBP6.83□□□□□ -1.32
SMG9-207ENST00000598860 HERVK_113P61574 105 aa6.83□□□□□ -1.32
SMG9-207ENST00000598860 Q6ZRN7 208 aaPredicted RBP6.83□□□□□ -1.32
SMG9-207ENST00000598860 IGHV1-58A0A0C4DH39 117 aa6.82□□□□□ -1.32
SMG9-207ENST00000598860 COX6A2Q02221 97 aa6.82□□□□□ -1.32
SMG9-207ENST00000598860 C14orf177Q52M58 125 aa6.82□□□□□ -1.32
SMG9-207ENST00000598860 TMEM170BQ5T4T1 132 aa6.82□□□□□ -1.32
SMG9-207ENST00000598860 CDKN2A-AS1Q9UH64 79 aa6.82□□□□□ -1.32
SMG9-207ENST00000598860 JOSD1Q15040 202 aaPredicted RBP6.81□□□□□ -1.32
SMG9-207ENST00000598860 C5orf38Q86SI9 138 aa6.81□□□□□ -1.32
SMG9-207ENST00000598860 PMCHL2Q9BQD1 86 aa6.81□□□□□ -1.32
SMG9-207ENST00000598860 PRAC1Q96KF2 57 aa6.8□□□□□ -1.32
SMG9-207ENST00000598860 IGHV3-64A0A075B6Q5 118 aa6.79□□□□□ -1.32
SMG9-207ENST00000598860 TMEM223A0PJW6 202 aa6.79□□□□□ -1.32
SMG9-207ENST00000598860 DNAH17Q9UFH2 4485 aa6.79□□□□□ -1.32
SMG9-207ENST00000598860 GVQW2A0A096LPI5 108 aaPredicted RBP6.78□□□□□ -1.32
SMG9-207ENST00000598860 HSBP1L1C9JCN9 74 aa6.78□□□□□ -1.32
SMG9-207ENST00000598860 F8WDY8 70 aa6.78□□□□□ -1.32
SMG9-207ENST00000598860 SPINK8P0C7L1 97 aa6.78□□□□□ -1.32
SMG9-207ENST00000598860 CXCL5P42830 114 aa6.78□□□□□ -1.32
SMG9-207ENST00000598860 SFTA2Q6UW10 78 aa6.78□□□□□ -1.32
SMG9-207ENST00000598860 Q8IZM0 81 aa6.78□□□□□ -1.32
SMG9-207ENST00000598860 ORAOV1Q8WV07 137 aa6.78□□□□□ -1.32
SMG9-207ENST00000598860 C2orf48Q96LS8 159 aa6.78□□□□□ -1.32
SMG9-207ENST00000598860 HECTD4Q9Y4D8 3996 aa6.77□□□□□ -1.33
SMG9-207ENST00000598860 C16orf90A8MZG2 172 aa6.77□□□□□ -1.33
SMG9-207ENST00000598860 SPAG11BQ08648 103 aa6.77□□□□□ -1.33
SMG9-207ENST00000598860 C15orf56Q8N910 161 aa6.77□□□□□ -1.33
SMG9-207ENST00000598860 PLEKHB2Q96CS7 222 aa6.77□□□□□ -1.33
SMG9-207ENST00000598860 LOC105371267A0A1B0GV96 52 aa6.76□□□□□ -1.33
SMG9-207ENST00000598860 LRCOL1A6NCL2 159 aa6.76□□□□□ -1.33
SMG9-207ENST00000598860 E9PLD3 99 aa6.76□□□□□ -1.33
SMG9-207ENST00000598860 XGP55808 180 aa6.76□□□□□ -1.33
SMG9-207ENST00000598860 PYY3Q5JQD4 70 aa6.76□□□□□ -1.33
SMG9-207ENST00000598860 COX7B2Q8TF08 81 aa6.76□□□□□ -1.33
SMG9-207ENST00000598860 A0A087WTM6 91 aa6.75□□□□□ -1.33
SMG9-207ENST00000598860 LEPROTO15243 131 aa6.75□□□□□ -1.33
SMG9-207ENST00000598860 SMIM6P0DI80 62 aa6.75□□□□□ -1.33
SMG9-207ENST00000598860 ATOH7Q8N100 152 aa6.75□□□□□ -1.33
SMG9-207ENST00000598860 TOMM7Q9P0U1 55 aa6.75□□□□□ -1.33
SMG9-207ENST00000598860 LGALS3P17931 250 aaKnown RBP6.74□□□□□ -1.33
SMG9-207ENST00000598860 NMUP48645 174 aa6.74□□□□□ -1.33
SMG9-207ENST00000598860 HIGD2BQ4VC39 106 aa6.74□□□□□ -1.33
SMG9-207ENST00000598860 Q8N814 137 aa6.74□□□□□ -1.33
SMG9-207ENST00000598860 VAMP8Q9BV40 100 aa6.74□□□□□ -1.33
SMG9-207ENST00000598860 J3QQQ9 107 aa6.73□□□□□ -1.33
SMG9-207ENST00000598860 NDUFA1O15239 70 aa6.73□□□□□ -1.33
SMG9-207ENST00000598860 CKS1BP61024 79 aa6.73□□□□□ -1.33
SMG9-207ENST00000598860 WFDC2Q14508 124 aa6.73□□□□□ -1.33
SMG9-207ENST00000598860 KIAA0087Q14695 138 aa6.73□□□□□ -1.33
SMG9-207ENST00000598860 C6orf226Q5I0X4 101 aa6.73□□□□□ -1.33
SMG9-207ENST00000598860 FAM218AQ96MZ4 157 aa6.73□□□□□ -1.33
SMG9-207ENST00000598860 CAMK2N2Q96S95 79 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms