RNA–Protein interactions for RNA: ENST00000598166.2

LTBP4-220, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 5

Gene LTBP4, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-220ENST00000598166 HIST1H2BCP62807 126 aa9.75□□□□□ -0.85
LTBP4-220ENST00000598166 HIST2H2BEQ16778 126 aa9.75□□□□□ -0.85
LTBP4-220ENST00000598166 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.75□□□□□ -0.85
LTBP4-220ENST00000598166 C2orf82Q6UX34 121 aa9.75□□□□□ -0.85
LTBP4-220ENST00000598166 UNQ6190/PRO20217Q6UXQ8 127 aa9.75□□□□□ -0.85
LTBP4-220ENST00000598166 SPACA4Q8TDM5 124 aa9.75□□□□□ -0.85
LTBP4-220ENST00000598166 HIST1H2BHQ93079 126 aa9.75□□□□□ -0.85
LTBP4-220ENST00000598166 IFI27L1Q96BM0 104 aa9.75□□□□□ -0.85
LTBP4-220ENST00000598166 HIST1H2BNQ99877 126 aa9.75□□□□□ -0.85
LTBP4-220ENST00000598166 HIST1H2BMQ99879 126 aa9.75□□□□□ -0.85
LTBP4-220ENST00000598166 SMIM1B2RUZ4 78 aa9.74□□□□□ -0.85
LTBP4-220ENST00000598166 SPINK8P0C7L1 97 aa9.74□□□□□ -0.85
LTBP4-220ENST00000598166 CIRBPQ14011 172 aaKnown RBP9.74□□□□□ -0.85
LTBP4-220ENST00000598166 COA6Q5JTJ3 125 aaKnown RBP9.74□□□□□ -0.85
LTBP4-220ENST00000598166 PRSS2P07478 247 aa9.73□□□□□ -0.85
LTBP4-220ENST00000598166 MAJINQ3KP22 176 aa9.73□□□□□ -0.85
LTBP4-220ENST00000598166 DPH3Q96FX2 82 aa9.73□□□□□ -0.85
LTBP4-220ENST00000598166 C6orf48Q9UBA6 75 aa9.73□□□□□ -0.85
LTBP4-220ENST00000598166 LOC107984640A0A0U1RRK4 108 aa9.72□□□□□ -0.85
LTBP4-220ENST00000598166 C11orf86A6NJI1 115 aa9.72□□□□□ -0.85
LTBP4-220ENST00000598166 F8WDY8 70 aa9.72□□□□□ -0.85
LTBP4-220ENST00000598166 ZNF22P17026 224 aaPredicted RBP9.72□□□□□ -0.85
LTBP4-220ENST00000598166 RPL18AQ02543 176 aaKnown RBP9.72□□□□□ -0.85
LTBP4-220ENST00000598166 GAGE2BQ13066 116 aa9.72□□□□□ -0.85
LTBP4-220ENST00000598166 LINC00528Q8N1L1 170 aa9.72□□□□□ -0.85
LTBP4-220ENST00000598166 MRPL35Q9NZE8 188 aaKnown RBP9.72□□□□□ -0.85
LTBP4-220ENST00000598166 A0A087WYN8 130 aa9.71□□□□□ -0.86
LTBP4-220ENST00000598166 H0Y8G0 127 aa9.71□□□□□ -0.86
LTBP4-220ENST00000598166 PLA2G1BP04054 148 aaKnown RBP9.71□□□□□ -0.86
LTBP4-220ENST00000598166 Q8IZM0 81 aa9.71□□□□□ -0.86
LTBP4-220ENST00000598166 CHTOPQ9Y3Y2 248 aaKnown RBP9.71□□□□□ -0.86
LTBP4-220ENST00000598166 TRAV12-1A0A0B4J245 112 aa9.7□□□□□ -0.86
LTBP4-220ENST00000598166 H3BRM9 83 aa9.7□□□□□ -0.86
LTBP4-220ENST00000598166 LEPROTL1O95214 131 aa9.7□□□□□ -0.86
LTBP4-220ENST00000598166 FABP4P15090 132 aa9.7□□□□□ -0.86
LTBP4-220ENST00000598166 PTTG1IPP53801 180 aa9.7□□□□□ -0.86
LTBP4-220ENST00000598166 RNF151Q2KHN1 245 aa9.7□□□□□ -0.86
LTBP4-220ENST00000598166 C6orf226Q5I0X4 101 aa9.7□□□□□ -0.86
LTBP4-220ENST00000598166 PKIGQ9Y2B9 76 aa9.7□□□□□ -0.86
LTBP4-220ENST00000598166 CKS1BP61024 79 aa9.69□□□□□ -0.86
LTBP4-220ENST00000598166 C9orf116Q5BN46 136 aaPredicted RBP9.69□□□□□ -0.86
LTBP4-220ENST00000598166 COX7B2Q8TF08 81 aa9.69□□□□□ -0.86
LTBP4-220ENST00000598166 PLA2G2DQ9UNK4 145 aa9.69□□□□□ -0.86
LTBP4-220ENST00000598166 TMEM170BQ5T4T1 132 aa9.68□□□□□ -0.86
LTBP4-220ENST00000598166 STPG4Q8N801 248 aa9.68□□□□□ -0.86
LTBP4-220ENST00000598166 PLAC8Q9NZF1 115 aa9.68□□□□□ -0.86
LTBP4-220ENST00000598166 TRBV30A0A0K0K1B3 111 aa9.67□□□□□ -0.86
LTBP4-220ENST00000598166 KRTAP10-4P60372 401 aaPredicted RBP9.67□□□□□ -0.86
LTBP4-220ENST00000598166 LINC00474Q9P2X8 69 aa9.67□□□□□ -0.86
LTBP4-220ENST00000598166 HSPB8Q9UJY1 196 aa9.67□□□□□ -0.86
LTBP4-220ENST00000598166 FAT3Q8TDW7 4589 aa9.66□□□□□ -0.86
LTBP4-220ENST00000598166 IGLV5-39A0A0G2JS06 123 aa9.66□□□□□ -0.86
LTBP4-220ENST00000598166 F8VRH5 84 aa9.66□□□□□ -0.86
LTBP4-220ENST00000598166 ODF1Q14990 250 aa9.66□□□□□ -0.86
LTBP4-220ENST00000598166 Q6ZRP5 223 aa9.66□□□□□ -0.86
LTBP4-220ENST00000598166 GAGE2EQ4V326 116 aa9.65□□□□□ -0.86
LTBP4-220ENST00000598166 GAGE2DQ9UEU5 116 aa9.65□□□□□ -0.86
LTBP4-220ENST00000598166 TLX1NBP0CAT3 122 aa9.64□□□□□ -0.87
LTBP4-220ENST00000598166 CXCL5P42830 114 aa9.64□□□□□ -0.87
LTBP4-220ENST00000598166 PMCHL2Q9BQD1 86 aa9.64□□□□□ -0.87
LTBP4-220ENST00000598166 A0A1W2PNN7 141 aa9.63□□□□□ -0.87
LTBP4-220ENST00000598166 OXTP01178 125 aa9.63□□□□□ -0.87
LTBP4-220ENST00000598166 TMEM223A0PJW6 202 aa9.62□□□□□ -0.87
LTBP4-220ENST00000598166 C5orf52A6NGY3 159 aa9.62□□□□□ -0.87
LTBP4-220ENST00000598166 NDUFC2-KCTD14E9PQ53 114 aa9.62□□□□□ -0.87
LTBP4-220ENST00000598166 FAM168BA1KXE4 195 aa9.61□□□□□ -0.87
LTBP4-220ENST00000598166 RPL37AP61513 92 aaKnown RBP9.61□□□□□ -0.87
LTBP4-220ENST00000598166 MAP1LC3CQ9BXW4 147 aa9.61□□□□□ -0.87
LTBP4-220ENST00000598166 C9orf129Q5T035 196 aaKnown RBP9.59□□□□□ -0.87
LTBP4-220ENST00000598166 FAM19A5Q7Z5A7 132 aaPredicted RBP9.59□□□□□ -0.87
LTBP4-220ENST00000598166 DPM2O94777 84 aa9.58□□□□□ -0.88
LTBP4-220ENST00000598166 PLNP26678 52 aa9.58□□□□□ -0.88
LTBP4-220ENST00000598166 C7orf33Q8WU49 177 aa9.58□□□□□ -0.88
LTBP4-220ENST00000598166 XAGE1AQ9HD64 81 aa9.58□□□□□ -0.88
LTBP4-220ENST00000598166 SYS1-DBNDD2H3BUS1 97 aa9.57□□□□□ -0.88
LTBP4-220ENST00000598166 ZNF625Q96I27 306 aaPredicted RBP9.57□□□□□ -0.88
LTBP4-220ENST00000598166 RNF213Q63HN8 5207 aa9.57□□□□□ -0.88
LTBP4-220ENST00000598166 IGKCP01834 107 aa9.56□□□□□ -0.88
LTBP4-220ENST00000598166 PHF5AQ7RTV0 110 aaKnown RBP9.56□□□□□ -0.88
LTBP4-220ENST00000598166 KRTAP7-1Q8IUC3 87 aa9.56□□□□□ -0.88
LTBP4-220ENST00000598166 HIST3H2BBQ8N257 126 aa9.56□□□□□ -0.88
LTBP4-220ENST00000598166 S100A6P06703 90 aa9.55□□□□□ -0.88
LTBP4-220ENST00000598166 SNRPEP62304 92 aaKnown RBP9.55□□□□□ -0.88
LTBP4-220ENST00000598166 C3orf79P0CE67 100 aa9.54□□□□□ -0.88
LTBP4-220ENST00000598166 PFN2P35080 140 aa9.54□□□□□ -0.88
LTBP4-220ENST00000598166 TSPEAR-AS2P59090 65 aa9.54□□□□□ -0.88
LTBP4-220ENST00000598166 ERG28Q9UKR5 140 aa9.54□□□□□ -0.88
LTBP4-220ENST00000598166 PKHD1L1Q86WI1 4243 aa9.54□□□□□ -0.88
LTBP4-220ENST00000598166 HNRNPA3P51991 378 aaKnown RBP9.53□□□□□ -0.88
LTBP4-220ENST00000598166 KRTDAPP60985 99 aa9.53□□□□□ -0.88
LTBP4-220ENST00000598166 M0QXV9 152 aa9.52□□□□□ -0.89
LTBP4-220ENST00000598166 PRR3P79522 188 aaKnown RBP9.52□□□□□ -0.89
LTBP4-220ENST00000598166 LINC01545Q5VT33 79 aa9.52□□□□□ -0.89
LTBP4-220ENST00000598166 PET117Q6UWS5 81 aa9.52□□□□□ -0.89
LTBP4-220ENST00000598166 LEPROTO15243 131 aa9.51□□□□□ -0.89
LTBP4-220ENST00000598166 HERVK_113P61574 105 aa9.51□□□□□ -0.89
LTBP4-220ENST00000598166 HIST1H2BLQ99880 126 aa9.51□□□□□ -0.89
LTBP4-220ENST00000598166 SFTA2Q6UW10 78 aa9.5□□□□□ -0.89
LTBP4-220ENST00000598166 NDUFA12Q9UI09 145 aa9.5□□□□□ -0.89
LTBP4-220ENST00000598166 TMA7Q9Y2S6 64 aaKnown RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms